BP915270
Clone id YMU001_000069_E08
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CGATAGGAAAGTGAGAGCATGTGCAGCGCAGGAGGTGTGCCAAGACAGAGGCAGAGAGAG
AGCGAGGAGGAGGGGGAGTCTGGGGGCAATGGTTCGCGACGAGCAGGGAATTACGTGTAG
GCAACGATGGCGAGCATCGAGTTGAGCAGAGGAGACCTGAAGCGTCGAAGCCAACATTGG
CTAATCTGCAGGTGGGCAGAGCGATCTCTCTCTCTCTCTATCATTCATTTGTCTGGAGCA
GTAGGAAAGACGATGCCTTTGAGGGTGGAAAAGGGAGGCATGCCAGGAGCTTCAGCAGAG
GGATTTTTTTGCGCTTCTCAAGTGACACATGAGGCCGACTCTCTCTCTCTCTCTCTCTCT
CTCTCTTTCCACACTGATTGTGAATGGGAGTTGTCCTTGAGGGACAAGCGAGCGAGTCAG
ACAGGAGACGGGATGATCACTAGGGAGGAGTAGAAGTGCCAATGTAGATGTATCTTGTGG
ATAGCGCTCACAAGCGATCTGGAGCGGAGAAGTGCGGACACGCATG
■■Homology search results ■■ -
sp_hit_id Q9JJP6
Definition sp|Q9JJP6|P63_RAT Tumor protein 63 OS=Rattus norvegicus
Align length 38
Score (bit) 30.4
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915270|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_E08.
(526 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9JJP6|P63_RAT Tumor protein 63 OS=Rattus norvegicus GN=Tp63 ... 30 5.4
sp|O88898|P63_MOUSE Tumor protein 63 OS=Mus musculus GN=Tp63 PE=... 30 5.4
sp|Q9H3D4|P63_HUMAN Tumor protein 63 OS=Homo sapiens GN=TP63 PE=... 30 5.4
sp|P03833|NIFJ_KLEPN Pyruvate-flavodoxin oxidoreductase OS=Klebs... 30 7.1
sp|Q86UP3|ZFHX4_HUMAN Zinc finger homeobox protein 4 OS=Homo sap... 25 7.9
sp|Q10136|STE7_SCHPO Protein ste7 OS=Schizosaccharomyces pombe G... 30 9.2
sp|A7MFQ5|PLSX_ENTS8 Fatty acid/phospholipid synthesis protein p... 30 9.2

>sp|Q9JJP6|P63_RAT Tumor protein 63 OS=Rattus norvegicus GN=Tp63
PE=2 SV=1
Length = 680

Score = 30.4 bits (67), Expect = 5.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1

Query: 127 SLPTRNSLLVANHCPQTPPPPRSLSASVLAHLLRCTCS 14
+LP S+ +HC TPPPP S+++ L R CS
Sbjct: 524 ALPPPLSMPSTSHC--TPPPPYPTDCSIVSFLARLGCS 559


>sp|O88898|P63_MOUSE Tumor protein 63 OS=Mus musculus GN=Tp63 PE=1
SV=1
Length = 680

Score = 30.4 bits (67), Expect = 5.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1

Query: 127 SLPTRNSLLVANHCPQTPPPPRSLSASVLAHLLRCTCS 14
+LP S+ +HC TPPPP S+++ L R CS
Sbjct: 524 ALPPPLSMPSTSHC--TPPPPYPTDCSIVSFLARLGCS 559


>sp|Q9H3D4|P63_HUMAN Tumor protein 63 OS=Homo sapiens GN=TP63 PE=1
SV=1
Length = 680

Score = 30.4 bits (67), Expect = 5.4
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1

Query: 127 SLPTRNSLLVANHCPQTPPPPRSLSASVLAHLLRCTCS 14
+LP S+ +HC TPPPP S+++ L R CS
Sbjct: 524 ALPPPLSMPSTSHC--TPPPPYPTDCSIVSFLARLGCS 559


>sp|P03833|NIFJ_KLEPN Pyruvate-flavodoxin oxidoreductase OS=Klebsiella
pneumoniae GN=nifJ PE=3 SV=2
Length = 1171

Score = 30.0 bits (66), Expect = 7.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -2

Query: 336 GLMCHLRSAKKSLC*SSWHASLFHPQRHRLSYCSRQMNDRERERS 202
G+ C R AK+++ WH +HPQR ++ E E S
Sbjct: 1080 GMRCSQREAKRAVEAGYWHLWRYHPQREAEGKTPFMLDSEEPEES 1124


>sp|Q86UP3|ZFHX4_HUMAN Zinc finger homeobox protein 4 OS=Homo sapiens
GN=ZFHX4 PE=1 SV=1
Length = 3567

Score = 24.6 bits (52), Expect(2) = 7.9
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = -1

Query: 175 VGFDASGLLCSTRCSPSLPTRNSLLVANHCPQTPPPPRSLSAS 47
+GF S S PT+ L P PPPP S S S
Sbjct: 3087 LGFPTSATSSPALSLSSAPTKPLLQTPPPPPPPPPPPPSSSLS 3129



Score = 22.7 bits (47), Expect(2) = 7.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3

Query: 299 SAEAPGMPPFSTLKGIVFPTA 237
+ + PGM S+L GI PTA
Sbjct: 3032 TVQQPGMMDSSSLHGISLPTA 3052


>sp|Q10136|STE7_SCHPO Protein ste7 OS=Schizosaccharomyces pombe
GN=ste7 PE=1 SV=1
Length = 569

Score = 29.6 bits (65), Expect = 9.2
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = -1

Query: 211 REIALPTCRLANVGFDASGLLCSTRCS--PSLPTRNSLLVANHCPQTPPPPRSLSASVLA 38
+ +A C ++ D S L C S SLPT + NHC +P S +A LA
Sbjct: 455 KTVATTVCHSSSSSGDFSALSCHRNLSFSESLPTAEDQVHNNHCAVSPSRRSSSNALYLA 514

Query: 37 HL 32
L
Sbjct: 515 TL 516


>sp|A7MFQ5|PLSX_ENTS8 Fatty acid/phospholipid synthesis protein plsX
OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=plsX
PE=3 SV=2
Length = 344

Score = 29.6 bits (65), Expect = 9.2
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +1

Query: 133 SIELSRGDLKRRSQHWLIC-RWAERSLSLSIIHLS 234
S+ S+G+ K+RS WL+ RW ++SLS HL+
Sbjct: 251 SLLKSQGEGKKRSWWWLLLKRWLQKSLSRRFSHLN 285


tr_hit_id A4U200
Definition tr|A4U200|A4U200_9PROT Putative uncharacterized protein OS=Magnetospirillum gryphiswaldense
Align length 87
Score (bit) 35.4
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915270|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_E08.
(526 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4U200|A4U200_9PROT Putative uncharacterized protein OS=Magne... 35 1.7
tr|B3RZ31|B3RZ31_TRIAD Putative uncharacterized protein (Fragmen... 34 4.0
tr|Q2W8T8|Q2W8T8_MAGMM Putative uncharacterized protein OS=Magne... 34 5.1
tr|A4HUG2|A4HUG2_LEIIN Putative uncharacterized protein OS=Leish... 34 5.2
tr|Q4S122|Q4S122_TETNG Chromosome 1 SCAF14770, whole genome shot... 33 6.7
tr|B4MDW0|B4MDW0_DROVI GJ17993 OS=Drosophila virilis GN=GJ17993 ... 33 6.7

>tr|A4U200|A4U200_9PROT Putative uncharacterized protein
OS=Magnetospirillum gryphiswaldense GN=MGR_0907 PE=4
SV=1
Length = 113

Score = 35.4 bits (80), Expect = 1.7
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Frame = +3

Query: 39 AKTEAERERGGGGVWGQWFATSRELRVGNDGEHRVEQRRPEASKPTLANLQVGRAISLSL 218
A EA+RE + A R++ VG+D + VE PE +P L + VGRA L+L
Sbjct: 2 ADIEADRE----AKLAEIVAKIRQILVGDDPQEIVEAVAPEPPQPVLTGISVGRAHRLTL 57

Query: 219 Y--HSF-------VWSSRKDDAFEGGK 272
H F +W + + F GGK
Sbjct: 58 LANHVFGDEDKACIWLTEPQERF-GGK 83


>tr|B3RZ31|B3RZ31_TRIAD Putative uncharacterized protein (Fragment)
OS=Trichoplax adhaerens GN=TRIADDRAFT_26631 PE=4 SV=1
Length = 438

Score = 34.3 bits (77), Expect = 4.0
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -1

Query: 166 DASGLLCSTRCSPSLPTRNSLLVANHCPQTPPPPRSLSASVLAHLLRCTC 17
DA G C +CSP RN N C +P +S ++ AH RC C
Sbjct: 19 DAHGYQC--KCSPGFTGRNCQTDNNPCRPSPCQGKSTCFAIRAHTYRCQC 66


>tr|Q2W8T8|Q2W8T8_MAGMM Putative uncharacterized protein
OS=Magnetospirillum magneticum (strain AMB-1 / ATCC
700264) GN=amb0933 PE=4 SV=1
Length = 116

Score = 33.9 bits (76), Expect = 5.1
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 9/68 (13%)
Frame = +3

Query: 96 ATSRELRVGNDGEHRVEQRRPEASKPTLANLQVGRAISLSLY--HSF-------VWSSRK 248
A R++ VG+D + VE PE +P L + VGRA L+L H F +W +
Sbjct: 20 AKIRQILVGDDPQGIVETVTPEPPQPVLTGISVGRAHRLTLLANHVFGDEDNACIWLTEP 79

Query: 249 DDAFEGGK 272
+ F GGK
Sbjct: 80 QERF-GGK 86


>tr|A4HUG2|A4HUG2_LEIIN Putative uncharacterized protein OS=Leishmania
infantum GN=LinJ10.0840 PE=4 SV=1
Length = 6802

Score = 33.9 bits (76), Expect = 5.2
Identities = 37/110 (33%), Positives = 50/110 (45%), Gaps = 10/110 (9%)
Frame = -1

Query: 337 RPHVSLEKRKKIPLLKLLACLPFPPSKASSFLLLQTNE**REREIALPTCRLANVGFDA- 161
RPH K + A P PPS +SSF E R+ LP L++V +
Sbjct: 6626 RPHQQHRSNFKYADVDRAAPRPRPPSDSSSFTGTSATE-IRQSVPPLPPPPLSSVTTPST 6684

Query: 160 --------SGLLCSTRCSPSLPTRNSLLVANHCPQTPPPPRSLS-ASVLA 38
SGL+ S R + S PT +S + N P PPPP ++S AS +A
Sbjct: 6685 TVPAPSANSGLVESPRQAVSTPTADS-VPKNLPPLPPPPPPTISLASAMA 6733


>tr|Q4S122|Q4S122_TETNG Chromosome 1 SCAF14770, whole genome shotgun
sequence. (Fragment) OS=Tetraodon nigroviridis
GN=GSTENG00025761001 PE=3 SV=1
Length = 565

Score = 33.5 bits (75), Expect = 6.7
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = -1

Query: 166 DASGLLCSTRCSPSLPTRNSLLVANHCPQTPPPPRSLSASVLAHLLRCTCS 14
D S L + P LP L+ ++HC TPPPP + +S+ + LLR C+
Sbjct: 400 DMSSLSPTHALQPQLP----LVPSSHC--TPPPPYPMDSSISSFLLRLGCA 444


>tr|B4MDW0|B4MDW0_DROVI GJ17993 OS=Drosophila virilis GN=GJ17993
PE=4 SV=1
Length = 758

Score = 33.5 bits (75), Expect = 6.7
Identities = 20/57 (35%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -1

Query: 214 EREIALPTCRLANVGFDASGLLCSTRCSPSL--PTRNSLLVANHCPQTPPPPRSLSA 50
E E +P C N D S L C+ + L P+ S NH P T PP S A
Sbjct: 516 EEECTMPACNQENAADDISPLTCTAAAATRLQQPSPLSEHHINHIPYTSPPTTSAQA 572