NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915285
Clone id YMU001_000069_G02
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_G02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGGAGAGAGAGAGAGAGATGGCTTCCAGTAAGGGCATAGTCGCACTGTTCCTGGTGCTCA
TGGTCTCTTTGGCCGGACTGATGGGTGCCGCCGCGCAGCCTCCTCCTCCGGCTCTGCAGT
GCACTCCCCTGCTAAACCTTGTGCCGGCTTGCCAGGCTTTAACTCTCTTCCCCGCCCTTG
CCCCAGTGCTCACCTCCGTCTGCTGCAACGCTCTCTCCACCGTCAACCTCCTGGGCATAG
GACTGGGTCCCAACGCCATCTGCCTCTGCGTGAAGCTCACCTTGCCCAACCTATCGCTCA
CCACCTGCCCTGGCCTCAGCATCGACCTCGCCCGCATCATCTTCGGCTCCAACGGAAGCT
GCGTCTGATCTCCTACATCGTCAGCCTGCAGCAGCTTCATGCAGTTCTGTTCATGTCTTG
TTGTATTTCTGTATGCGGATTTCATGTTCTCCGCCATGCTAGCTCGTTTCTGTACTACCT
TGTAGATTTGGATTGATGCTTTGTTCTCTGGCCCTCTCTCGATCTG
■■Homology search results ■■ -
sp_hit_id Q93Z00
Definition sp|Q93Z00|TCP14_ARATH Transcription factor TCP14 OS=Arabidopsis thaliana
Align length 73
Score (bit) 31.6
E-value 2.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915285|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_G02.
         (526 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q93Z00|TCP14_ARATH Transcription factor TCP14 OS=Arabidopsis ...    32   2.4  
sp|Q9UJ04|TSYL4_HUMAN Testis-specific Y-encoded-like protein 4 O...    31   3.2  
sp|O17818|SRE37_CAEEL Serpentine receptor class epsilon-37 OS=Ca...    30   9.2  
sp|Q28HT3|FOXI2_XENTR Forkhead box protein I2 OS=Xenopus tropica...    30   9.2  

>sp|Q93Z00|TCP14_ARATH Transcription factor TCP14 OS=Arabidopsis
           thaliana GN=TCP14 PE=2 SV=1
          Length = 489

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 8/73 (10%)
 Frame = -3

Query: 239 YAQEVDGGESVAADGGEHWGK--------GGEES*SLASRHKV*QGSALQSRRRRLRGGT 84
           Y   V G  S A   G H+           G++  +  S H++ + S      R   GG 
Sbjct: 381 YRSGVSGVPSGAVSSGLHFMNFAAPMAFLTGQQQLATTSNHEINEDSNNNEGGRSDGGGD 440

Query: 83  HQSGQRDHEHQEQ 45
           H + QR H HQ+Q
Sbjct: 441 HHNTQRHHHHQQQ 453


>sp|Q9UJ04|TSYL4_HUMAN Testis-specific Y-encoded-like protein 4
           OS=Homo sapiens GN=TSPYL4 PE=2 SV=2
          Length = 414

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
 Frame = -1

Query: 523 IERGPENKASIQIYKVVQKRASMAENMKSAYRNTTRHEQNCMKLLQADD--------VGD 368
           +E+  E  A+++  KVVQK   +A  +K   R       NCM  L+A D          D
Sbjct: 163 VEKEGEAGAAMEEKKVVQKEKKVAGGVKEETRPRAPKINNCMDSLEAIDQELSNVNAQAD 222

Query: 367 QTQLPLEPKMMRARSM 320
           +  L LE K  R R +
Sbjct: 223 RAFLQLERKFGRMRRL 238


>sp|O17818|SRE37_CAEEL Serpentine receptor class epsilon-37
           OS=Caenorhabditis elegans GN=sre-37 PE=2 SV=2
          Length = 362

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 19/58 (32%), Positives = 27/58 (46%)
 Frame = -1

Query: 325 SMLRPGQVVSDRLGKVSFTQRQMALGPSPMPRRLTVERALQQTEVSTGARAGKRVKAW 152
           SML P  V+S  L   S   ++  +   P+ RRL       Q   ST + AGK  +A+
Sbjct: 296 SMLLPALVMSLTLLSCSPAWKERFISGLPIIRRLKSSSVAHQNSYSTASSAGKETEAY 353


>sp|Q28HT3|FOXI2_XENTR Forkhead box protein I2 OS=Xenopus tropicalis
           GN=foxi2 PE=2 SV=1
          Length = 368

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = -1

Query: 523 IERGPENKASI-QIYKVVQKRASMAENMKSAYRNTTRHE---QNCMKLLQADD 377
           I+  PE K ++ QIY  V +     +  K+ ++N+ RH     +C K +  DD
Sbjct: 137 IQNNPEKKLTLSQIYSYVAENFPFYKKSKAGWQNSIRHNLSLNDCFKKVARDD 189
tr_hit_id Q0F377
Definition tr|Q0F377|Q0F377_9PROT TraG OS=Mariprofundus ferrooxydans PV-1
Align length 66
Score (bit) 35.8
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915285|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_G02.
         (526 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0F377|Q0F377_9PROT TraG OS=Mariprofundus ferrooxydans PV-1 G...    36   1.4  
tr|A7P315|A7P315_VITVI Chromosome chr1 scaffold_5, whole genome ...    35   2.3  
tr|B1XZJ9|B1XZJ9_LEPCP Putative metal dependent phosphohydrolase...    35   2.3  
tr|B2GI14|B2GI14_KOCRD Two-component histidine kinase OS=Kocuria...    35   3.0  
tr|B7P201|B7P201_IXOSC Ran GTPase-activating protein, putative O...    35   3.0  
tr|B7PKX0|B7PKX0_IXOSC Secreted protein, putative OS=Ixodes scap...    34   5.1  
tr|Q4QGQ9|Q4QGQ9_LEIMA Putative uncharacterized protein OS=Leish...    33   6.6  
tr|A9TXH4|A9TXH4_PHYPA Predicted protein OS=Physcomitrella paten...    33   6.7  
tr|A4RJF9|A4RJF9_MAGGR Putative uncharacterized protein OS=Magna...    33   6.7  
tr|Q89XP8|Q89XP8_BRAJA Blr0260 protein OS=Bradyrhizobium japonic...    33   8.6  

>tr|Q0F377|Q0F377_9PROT TraG OS=Mariprofundus ferrooxydans PV-1
           GN=SPV1_04568 PE=4 SV=1
          Length = 974

 Score = 35.8 bits (81), Expect = 1.4
 Identities = 22/66 (33%), Positives = 28/66 (42%)
 Frame = -1

Query: 391 LQADDVGDQTQLPLEPKMMRARSMLRPGQVVSDRLGKVSFTQRQMALGPSPMPRRLTVER 212
           +  D  GD      E +M  A   L PG  VSD  G V   QR+  L PS  P    V++
Sbjct: 790 MDIDIDGDGRVAGWEAEMQEATGTLEPGHRVSDPTGTVDHKQREADLDPSKQPALPHVDQ 849

Query: 211 ALQQTE 194
            +   E
Sbjct: 850 KISDAE 855


>tr|A7P315|A7P315_VITVI Chromosome chr1 scaffold_5, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00030268001
            PE=4 SV=1
          Length = 1091

 Score = 35.0 bits (79), Expect = 2.3
 Identities = 20/74 (27%), Positives = 36/74 (48%)
 Frame = -3

Query: 248  TQSYAQEVDGGESVAADGGEHWGKGGEES*SLASRHKV*QGSALQSRRRRLRGGTHQSGQ 69
            + S  +EVDGG + + DG  + G   +E    + + ++  G     R+RR   G H++  
Sbjct: 870  SDSVMREVDGGHAQSVDGVSNMGSKEQEGPEDSQQSELKSGRRKPGRKRRT--GVHRTRS 927

Query: 68   RDHEHQEQCDYALT 27
            R+  H E+    +T
Sbjct: 928  RETSHAEKAASTIT 941


>tr|B1XZJ9|B1XZJ9_LEPCP Putative metal dependent phosphohydrolase
           OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 /
           SP-6) GN=Lcho_4311 PE=4 SV=1
          Length = 408

 Score = 35.0 bits (79), Expect = 2.3
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = -1

Query: 355 PLEPKMMRARSMLRPGQVVSDRLGKVSFTQRQMALGPSPMPRRLTVERALQQTE 194
           P+   M+RA  +  PG VV  R G+++   R+ A GP+P+   ++  R +   E
Sbjct: 299 PIATAMLRAIGIFPPGDVVQLRSGEIAVVTRRAAKGPAPLAASVSNARGVPVLE 352


>tr|B2GI14|B2GI14_KOCRD Two-component histidine kinase OS=Kocuria
           rhizophila (strain ATCC 9341 / DSM 348 / NBRC 12708 /
           DC2201) GN=KRH_21790 PE=4 SV=1
          Length = 400

 Score = 34.7 bits (78), Expect = 3.0
 Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
 Frame = +3

Query: 147 ACQALTLFPALAPVLTSVCCNALSTVNLLGIGLGPNAICL----CVKLTLPNLSLT 302
           AC     F  + PV T+ C  ALS + LL + + P  +CL    CV  T   LS T
Sbjct: 49  ACWIPLFFRRVNPVATAYCVGALSLLGLLVLNVAPIGLCLWAVPCVVYTAAKLSPT 104


>tr|B7P201|B7P201_IXOSC Ran GTPase-activating protein, putative
           OS=Ixodes scapularis GN=IscW_ISCW016093 PE=4 SV=1
          Length = 527

 Score = 34.7 bits (78), Expect = 3.0
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = +3

Query: 174 ALAPVLTSVCCNALSTVNLLGIGLGPNAICLCVKLTLPNLSLTTCPGLSIDLARIIFGSN 353
           AL P+L+S CC  L T+ L   GLGP    L  K     L+ +   G  + L  ++ G N
Sbjct: 132 ALVPLLSSPCCFQLKTLLLNNNGLGPGGAELLAKALGACLAESRKAGTPLQLRTLVCGRN 191


>tr|B7PKX0|B7PKX0_IXOSC Secreted protein, putative OS=Ixodes
           scapularis GN=IscW_ISCW005695 PE=4 SV=1
          Length = 235

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 13/49 (26%)
 Frame = +3

Query: 234 GIGLGPNAICLCVKLTLPNL---------SLTTCP----GLSIDLARII 341
           G+ + P+A   C+ +TLPN+         +L TCP    GL +DLARI+
Sbjct: 14  GLLISPSANAKCINVTLPNVLNLGSCLGPTLVTCPDTSDGLLVDLARIL 62


>tr|Q4QGQ9|Q4QGQ9_LEIMA Putative uncharacterized protein OS=Leishmania
            major GN=LmjF12.0340 PE=4 SV=1
          Length = 2203

 Score = 33.5 bits (75), Expect = 6.6
 Identities = 26/68 (38%), Positives = 29/68 (42%)
 Frame = -3

Query: 236  AQEVDGGESVAADGGEHWGKGGEES*SLASRHKV*QGSALQSRRRRLRGGTHQSGQRDHE 57
            A  VDGG S AA      G   E S S     ++ Q +A   R RR R   H   Q  H 
Sbjct: 2098 AAAVDGGASGAAATVASRGAPTETS-SAPPASQLPQQAAAYRRHRRCRNSHHHRHQCHHT 2156

Query: 56   HQEQCDYA 33
            H E C YA
Sbjct: 2157 HGELCCYA 2164


>tr|A9TXH4|A9TXH4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_172542 PE=4 SV=1
          Length = 361

 Score = 33.5 bits (75), Expect = 6.7
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 26/118 (22%)
 Frame = -1

Query: 517 RGPENKASIQIYKVVQKR-ASMAENMKS------AYRNTTRHEQNCM-----------KL 392
           RG E K   ++ + ++ R AS+A++ +S      A+ +  +HE + +           K 
Sbjct: 8   RGIEPKGGAEMEESIEDRVASLAKSCRSLKEAASAHSSRWQHEADTLSKQAINHVSTLKK 67

Query: 391 LQAD--------DVGDQTQLPLEPKMMRARSMLRPGQVVSDRLGKVSFTQRQMALGPS 242
           LQ D        ++  QT   LE ++ RAR+ML  G+V S    K +    +M LGP+
Sbjct: 68  LQVDVGSASEKDEIDQQTADKLEEELYRARTMLYNGEVSSLLPAKANGVFLRMLLGPT 125


>tr|A4RJF9|A4RJF9_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_01835 PE=4 SV=1
          Length = 1348

 Score = 33.5 bits (75), Expect = 6.7
 Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
 Frame = -1

Query: 397 KLLQADDVGDQTQLPLEPKMMRARSMLRPGQVVSDR--LGKVS-FTQRQMALGPSPMPRR 227
           KL  A+D+   T +   P  +RA S+ +P  V S +  L K++ F+Q     G    P+ 
Sbjct: 88  KLKVAEDIARPT-VAAAPSPVRAASLTKPTSVSSPKPPLSKLAAFSQADSGYGSQSQPQP 146

Query: 226 LTVERALQQTEVSTGARAGKRVKAWQ 149
           L+++  +  T+V     +G+    WQ
Sbjct: 147 LSLQDNVDDTDVEMEDDSGEEESNWQ 172


>tr|Q89XP8|Q89XP8_BRAJA Blr0260 protein OS=Bradyrhizobium japonicum
           GN=blr0260 PE=4 SV=1
          Length = 627

 Score = 33.1 bits (74), Expect = 8.6
 Identities = 25/94 (26%), Positives = 40/94 (42%)
 Frame = +3

Query: 147 ACQALTLFPALAPVLTSVCCNALSTVNLLGIGLGPNAICLCVKLTLPNLSLTTCPGLSID 326
           A  A  +   LA +L  +  N +S   LL IGL P  I L + +TLP+  L++   L + 
Sbjct: 373 AVMATPIACVLAGILKYLVFNGVSEFQLLAIGLAPVVIGLALLITLPSPMLSSIGRLVLV 432

Query: 327 LARIIFGSNGSCV*SPTSSACSSFMQFCSCLVVF 428
              ++          P     +S     S ++VF
Sbjct: 433 FTLVVLAPTNPQSYDPEVFLVTSLFVCLSSVLVF 466