BP915295
Clone id YMU001_000069_H02
Library
Length 468
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CAGCCACACGGGGCTGGACGCATTCTTTCTTTCGTGGTACGTGCAATGGGAAATTCGTTG
TTGATGAGCGGCTAATCTCAAAGAGTGGGTGTAAGGTGGGCGTTGTACTGTCGCATAGCC
AAGGTCCGTGTAATTCTTTTGGCGAGAGAGAGACCAAAGCATTCATAATCTGCCCTTGAC
GTAAGAGAATAAATGGGCGGCGGCACAGTTTTCCAAGGAGGTGCTTGGTGTTCCAGGCAA
TGAGCTGTATCTCAAGAGGGGGTCAGCCAGTGTAATAACCCTCGCGTTGTATTTTGAACC
ACACGGGAAAAAAATCCAGTTCATTCCATTGTAATTGAACCATTTCAATTAGTTAGGTTC
TTTGAGGTCAAGAGCGTCTTTAATGTTCGATAGGCGAACTCTGCCTTTCGAGTTCTAGAC
GCCCAAGCATTTACTACATGGTCAGTAAACTACACTGGCTAATCTGCA
■■Homology search results ■■ -
sp_hit_id Q01040
Definition sp|Q01040|UL32_SHV21 Probable major envelope glycoprotein 68 OS=Saimiriine herpesvirus 2 (strain 11)
Align length 30
Score (bit) 33.9
E-value 0.37
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915295|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_H02.
(468 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q01040|UL32_SHV21 Probable major envelope glycoprotein 68 OS=... 34 0.37
sp|P40169|YNT4_YEAST Uncharacterized plasma membrane protein YNL... 32 1.1
sp|Q8NFD5|ARI1B_HUMAN AT-rich interactive domain-containing prot... 29 8.9

>sp|Q01040|UL32_SHV21 Probable major envelope glycoprotein 68
OS=Saimiriine herpesvirus 2 (strain 11) GN=68 PE=3 SV=1
Length = 436

Score = 33.9 bits (76), Expect = 0.37
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1

Query: 273 TLADPLLRYSSLPGTPSTSLENCAAAHLFS 184
T + LL YS +PGTP T+L+N A H ++
Sbjct: 15 TSIECLLNYSFMPGTPETALDNLALVHTYA 44


>sp|P40169|YNT4_YEAST Uncharacterized plasma membrane protein
YNL194C OS=Saccharomyces cerevisiae GN=YNL194C PE=1 SV=1
Length = 301

Score = 32.3 bits (72), Expect = 1.1
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = -1

Query: 357 PN*LKWFNYNGMNW----IFFPCGSKYNARVITLADPLLRYSSLPGTPSTSLENCAAAHL 190
P+ +W+NYN W I C SK A+ + D + S P PST L N A +
Sbjct: 53 PSVTRWYNYNWCGWESRGIAVNCSSKMAAQPFSPRD---NFGSSPLMPSTFLNNRNAYYY 109

Query: 189 FSYV 178
S V
Sbjct: 110 LSRV 113


>sp|Q8NFD5|ARI1B_HUMAN AT-rich interactive domain-containing protein
1B OS=Homo sapiens GN=ARID1B PE=1 SV=2
Length = 2236

Score = 29.3 bits (64), Expect = 8.9
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 6/52 (11%)
Frame = -2

Query: 299 VQNTTRGLLHWLTPS*DTA-HCLEH-----QAPPWKTVPPPIYSLTSRADYE 162
VQ GLLHW DT H H + PP + PPP+ S + + E
Sbjct: 1796 VQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPLSSAGRKKEQE 1847


tr_hit_id B4UFK9
Definition tr|B4UFK9|B4UFK9_ANASK Serine/threonine protein kinase OS=Anaeromyxobacter sp. (strain K)
Align length 43
Score (bit) 35.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915295|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_H02.
(468 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4UFK9|B4UFK9_ANASK Serine/threonine protein kinase OS=Anaero... 35 1.9
tr|Q6AXY6|Q6AXY6_RAT Hypothetical gene supported by BC079265 OS=... 34 4.2
tr|B6WFQ5|B6WFQ5_9BACE Putative uncharacterized protein OS=Bacte... 33 7.1
tr|A2TWT9|A2TWT9_9FLAO Putative uncharacterized protein OS=Polar... 33 9.3

>tr|B4UFK9|B4UFK9_ANASK Serine/threonine protein kinase
OS=Anaeromyxobacter sp. (strain K) GN=AnaeK_3927 PE=4
SV=1
Length = 1136

Score = 35.0 bits (79), Expect = 1.9
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = -3

Query: 136 ELHGPWLCD---STTPTLHPLFEISRSSTTNFPLHVPRKKECV 17
ELHG WLC S P HPL + S + L RK EC+
Sbjct: 492 ELHGEWLCRHLASLKPQTHPLLPVKASIPLDLVLQRFRKTECI 534


>tr|Q6AXY6|Q6AXY6_RAT Hypothetical gene supported by BC079265
OS=Rattus norvegicus GN=LOC499279 PE=2 SV=1
Length = 215

Score = 33.9 bits (76), Expect = 4.2
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -3

Query: 172 QIMNALVSLSPKELHGPWLCDSTTPTLHPLFEI--SRSSTTNFPLHVPRKKECVQ 14
+I ++ S S KE+H P+L + L P+++I +++ NFP V + C +
Sbjct: 26 KIPESITSTSLKEIHCPYLSEQVEKRLPPIYKIREKQAANKNFPFSVHDNRHCFE 80


>tr|B6WFQ5|B6WFQ5_9BACE Putative uncharacterized protein
OS=Bacteroides finegoldii DSM 17565 GN=BACFIN_01327 PE=4
SV=1
Length = 1044

Score = 33.1 bits (74), Expect = 7.1
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -1

Query: 345 KWFNYNGMNWIFFPCGSKYNARVITLADPLLR 250
K F NGMNW +FP G+ Y+ + T D +++
Sbjct: 40 KSFMVNGMNWDYFPVGTNYSYSLWTKPDDIIK 71


>tr|A2TWT9|A2TWT9_9FLAO Putative uncharacterized protein
OS=Polaribacter sp. MED152 GN=MED152_00440 PE=4 SV=1
Length = 442

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -1

Query: 414 NSKGRVRLSNIKDALDLKEPN*LKWFNYNGMNWIFFPCGSKYNARVITLADPLLR 250
N++ + +S + D L +K K F NGMNW + P G+ Y+ + +D ++
Sbjct: 21 NAQKQTEVSIVSDDLGMKLKVNGKDFMINGMNWDYIPIGTNYSFSLWNQSDDFIK 75