BP915298
Clone id YMU001_000069_H06
Library
Length 443
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_H06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGGACAGCAGAGGGAACCACATCAAAGAACTTATGGCAGCTACTTATAGAATTGAAGCAA
TATAGTATACTGAAGTATGCATCATATATTTAAAGTTTGTAGATCTATGGGTGGTGATGT
GTTGCATCACTAAGGGAGGGTAAAGGAGCACCTGATTTCATAAAGAAGGATTGGTTTGTG
GTTGGGTTATGAAAAATTCATAAAGAGAAGGTCAGGGGAAGGTTTCCTACTATGTATGAA
TTAGTATTTAAACTGGTCCTCCTTAAAGATAAAAGTTATGCATGTAAGTAAAGGATGTCA
ATCAAGAGGAAACTAATGGGGTTCGAGCACCTCTAGTATCGATCACATCAGTGCACAGAG
GAGTCAACCACTAGAAGGATCTGAAGATCAGCAAGACTTGCTAAATCGGATTTCCGATCA
ACTAGAGAACATGTACGAATTGT
■■Homology search results ■■ -
sp_hit_id A1T3D2
Definition sp|A1T3D2|HEM1_MYCVP Glutamyl-tRNA reductase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1)
Align length 33
Score (bit) 29.3
E-value 7.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915298|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_H06.
(443 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A1T3D2|HEM1_MYCVP Glutamyl-tRNA reductase OS=Mycobacterium va... 29 7.7
sp|A4T341|HEM1_MYCGI Glutamyl-tRNA reductase OS=Mycobacterium gi... 29 7.7

>sp|A1T3D2|HEM1_MYCVP Glutamyl-tRNA reductase OS=Mycobacterium
vanbaalenii (strain DSM 7251 / PYR-1) GN=hemA PE=3 SV=1
Length = 456

Score = 29.3 bits (64), Expect = 7.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3

Query: 318 GVRAPLVSITSVHRGVNH*KDLKISKTC*IGFP 416
G P+VS+ VHRG+ H ++ K C +G P
Sbjct: 256 GAVRPVVSLADVHRGLAHVREPKELVICDLGMP 288


>sp|A4T341|HEM1_MYCGI Glutamyl-tRNA reductase OS=Mycobacterium
gilvum (strain PYR-GCK) GN=hemA PE=3 SV=1
Length = 455

Score = 29.3 bits (64), Expect = 7.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3

Query: 318 GVRAPLVSITSVHRGVNH*KDLKISKTC*IGFP 416
G P+VS+ VHRG+ H ++ K C +G P
Sbjct: 256 GAVRPVVSLADVHRGLAHVREPKDLVICDLGMP 288


tr_hit_id A8XIV7
Definition tr|A8XIV7|A8XIV7_CAEBR Putative uncharacterized protein OS=Caenorhabditis briggsae
Align length 33
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915298|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_H06.
(443 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8XIV7|A8XIV7_CAEBR Putative uncharacterized protein OS=Caeno... 33 5.4
tr|Q2L3M1|Q2L3M1_9LUTE Multifunctional protein (Fragment) OS=Sug... 33 9.2

>tr|A8XIV7|A8XIV7_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG13862 PE=3 SV=2
Length = 827

Score = 33.5 bits (75), Expect = 5.4
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +2

Query: 332 SSIDHISAQRSQPLEGSEDQQDLLNRISDQLEN 430
+SIDHI+ + PL GS D ++L ++S +++N
Sbjct: 551 NSIDHITNELDAPLSGSMDSKELSEKLSQEIQN 583


>tr|Q2L3M1|Q2L3M1_9LUTE Multifunctional protein (Fragment)
OS=Sugarcane yellow leaf virus PE=4 SV=1
Length = 219

Score = 32.7 bits (73), Expect = 9.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2

Query: 320 GSSTSSIDHISAQRSQPLEGSEDQQDLLNRISDQLENMYEL 442
GS S DH+ S PL+ E ++LLN I QL +L
Sbjct: 74 GSEPSGADHLKTPESTPLKQDESTKELLNNIVSQLIQKIDL 114