BP915299 |
Clone id |
YMU001_000069_H07 |
Library |
YMU01 |
Length |
401 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000069_H07. |
Accession |
BP915299 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL485Contig1 |
Sequence |
ACCGTTCGTCCCTACGATTCCTCTTAGATCTGTGCGGTTCCTGTGTCTGCTTACCATAAA CACAATGCTCACAAAACTTGAAATCTTGAAATGAAAAGCCAGGCAAATAACCATAATGAG AAAGTATTTCCATTCCTCTTTTTGACATATGTCCCAACCTACGATGCCACAGTGACACAC TTGGCTGCTCAATCACATTAATTACATGGTTTTAAACCTCTGAAACATGTAAAGTGTACA GAGTTCCTGACTTTCTGCCATGTGCTACAGTCATCGAACCTTTGGAGATCCTTCAAGCGT TGTTCCCAAAAACTGTCACATAACCCGCATCATCCAACTTCCCTGTACTAATCAAGCTCT TTCGGATTGCTGGAACATATCTGACATTCTTGAGCCATAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P10978 |
Definition |
sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum |
Align length |
130 |
Score (bit) |
90.5 |
E-value |
2.0e-18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5C540 |
Definition |
tr|A5C540|A5C540_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
130 |
Score (bit) |
110.0 |
E-value |
5.0e-23 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915299|Adiantum capillus-veneris mRNA, clone: YMU001_000069_H07. (401 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5C540|A5C540_VITVI Putative uncharacterized protein OS=Vitis... 110 5e-23 tr|A5C9D7|A5C9D7_VITVI Putative uncharacterized protein OS=Vitis... 107 4e-22 tr|A5BAF2|A5BAF2_VITVI Putative uncharacterized protein OS=Vitis... 105 1e-21 tr|Q5MG99|Q5MG99_IPOBA Hypothetical retrotransposon OS=Ipomoea b... 104 2e-21 tr|A5BC72|A5BC72_VITVI Putative uncharacterized protein OS=Vitis... 103 6e-21 tr|A5B4R8|A5B4R8_VITVI Putative uncharacterized protein OS=Vitis... 102 7e-21 tr|A5AVU6|A5AVU6_VITVI Putative uncharacterized protein OS=Vitis... 102 7e-21 tr|A5B0V5|A5B0V5_VITVI Putative uncharacterized protein OS=Vitis... 100 3e-20 tr|A5BWL7|A5BWL7_VITVI Putative uncharacterized protein OS=Vitis... 100 4e-20 tr|A5BPC1|A5BPC1_VITVI Putative uncharacterized protein OS=Vitis... 100 4e-20 tr|A5ADX1|A5ADX1_VITVI Putative uncharacterized protein OS=Vitis... 100 4e-20 tr|A5CBM1|A5CBM1_VITVI Putative uncharacterized protein OS=Vitis... 100 6e-20 tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis... 100 6e-20 tr|A5BPB3|A5BPB3_VITVI Putative uncharacterized protein OS=Vitis... 100 6e-20 tr|A5BM25|A5BM25_VITVI Putative uncharacterized protein OS=Vitis... 100 6e-20 tr|A5BGX3|A5BGX3_VITVI Putative uncharacterized protein OS=Vitis... 100 6e-20 tr|A5BD56|A5BD56_VITVI Putative uncharacterized protein OS=Vitis... 100 6e-20 tr|A5BA89|A5BA89_VITVI Putative uncharacterized protein OS=Vitis... 100 6e-20 tr|A5B377|A5B377_VITVI Putative uncharacterized protein OS=Vitis... 100 6e-20 tr|A5APH6|A5APH6_VITVI Putative uncharacterized protein OS=Vitis... 99 8e-20 tr|A5ASH8|A5ASH8_VITVI Putative uncharacterized protein OS=Vitis... 99 1e-19 tr|A5C844|A5C844_VITVI Putative uncharacterized protein OS=Vitis... 99 1e-19 tr|A5BIC7|A5BIC7_VITVI Putative uncharacterized protein OS=Vitis... 99 1e-19 tr|A5AS37|A5AS37_VITVI Putative uncharacterized protein OS=Vitis... 99 1e-19 tr|A5AM64|A5AM64_VITVI Putative uncharacterized protein OS=Vitis... 99 1e-19 tr|A5B7B1|A5B7B1_VITVI Putative uncharacterized protein OS=Vitis... 98 2e-19 tr|A5B0E4|A5B0E4_VITVI Putative uncharacterized protein OS=Vitis... 98 2e-19 tr|A5ATR7|A5ATR7_VITVI Putative uncharacterized protein OS=Vitis... 98 2e-19 tr|A7R7G1|A7R7G1_VITVI Chromosome undetermined scaffold_1754, wh... 98 2e-19 tr|A5AMT8|A5AMT8_VITVI Putative uncharacterized protein OS=Vitis... 98 2e-19
>tr|A5C540|A5C540_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024474 PE=4 SV=1 Length = 1207
Score = 110 bits (274), Expect = 5e-23 Identities = 53/130 (40%), Positives = 81/130 (62%) Frame = -2
Query: 400 LWLKNVRYVPAIRKSLISTGKLDDAGYVTVFGNNA*RISKGSMTVAHGRKSGTLYTLHVS 221 L LKNV+++P IR +LISTGKLDD G+ +F ++ ++++GSM +A G KS +LY + Sbjct: 228 LTLKNVKHIPDIRMNLISTGKLDDEGFYNIFRDSQWKLTRGSMVIAKGNKSSSLYLMQTR 287
Query: 220 EV*NHVINVIEQPSVSLWHRRLGHMSKRGMEILSHYGYLPGFSFQDFKFCEHCVYGKQTQ 41 + + + V + + LWH RLGHMS++G+ IL+ L G K C HC+ GKQT+ Sbjct: 288 VIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSGMKKGSLKRCAHCLAGKQTR 347
Query: 40 EPHRSKRNRR 11 ++ R R Sbjct: 348 VAFKTLRYTR 357
>tr|A5C9D7|A5C9D7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_007304 PE=4 SV=1 Length = 1362
Score = 107 bits (266), Expect = 4e-22 Identities = 51/130 (39%), Positives = 80/130 (61%) Frame = -2
Query: 400 LWLKNVRYVPAIRKSLISTGKLDDAGYVTVFGNNA*RISKGSMTVAHGRKSGTLYTLHVS 221 L LKNV+++P IR +LISTGKLDD G+ F ++ ++++GSM +A G KS +LY + Sbjct: 325 LTLKNVKHIPDIRMNLISTGKLDDEGFCNTFRDSQWKLTRGSMVIAKGNKSSSLYLMQAR 384
Query: 220 EV*NHVINVIEQPSVSLWHRRLGHMSKRGMEILSHYGYLPGFSFQDFKFCEHCVYGKQTQ 41 + + + V + + LWH +LGHMS++G+ IL+ L G K C HC+ GKQT+ Sbjct: 385 VIDSSINAVDDDSTFELWHNKLGHMSEKGLMILAKKNLLXGMKKGSLKRCAHCLAGKQTR 444
Query: 40 EPHRSKRNRR 11 ++ + R Sbjct: 445 VAFKTLHHTR 454
>tr|A5BAF2|A5BAF2_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027081 PE=4 SV=1 Length = 1204
Score = 105 bits (261), Expect = 1e-21 Identities = 51/130 (39%), Positives = 79/130 (60%) Frame = -2
Query: 400 LWLKNVRYVPAIRKSLISTGKLDDAGYVTVFGNNA*RISKGSMTVAHGRKSGTLYTLHVS 221 L LKNV+++P IR +LIST KLDD G+ F ++ +++GSM +A G KS +LY + Sbjct: 297 LTLKNVKHIPDIRMNLISTRKLDDEGFCNTFRDSQWNLTRGSMVIAKGNKSSSLYLMQAR 356
Query: 220 EV*NHVINVIEQPSVSLWHRRLGHMSKRGMEILSHYGYLPGFSFQDFKFCEHCVYGKQTQ 41 + +++ V + + LWH RLGHMS++G+ IL+ L G K C HC+ GKQT+ Sbjct: 357 VIDSNINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSGMKKGSLKRCAHCLAGKQTR 416
Query: 40 EPHRSKRNRR 11 ++ + R Sbjct: 417 VAFKTLHHTR 426
>tr|Q5MG99|Q5MG99_IPOBA Hypothetical retrotransposon OS=Ipomoea batatas PE=4 SV=1 Length = 1415
Score = 104 bits (260), Expect = 2e-21 Identities = 57/119 (47%), Positives = 76/119 (63%), Gaps = 1/119 (0%) Frame = -2
Query: 400 LWLKNVRYVPAIRKSLISTGKLDDAGYVTVFGNNA*RISKGSMTVAHGRKSGTLYTLHVS 221 L LKNV++ P IR +LISTGKLDD G+ FG+ +I+KGS+ VA G KS LY+L S Sbjct: 343 LVLKNVKHAPDIRLNLISTGKLDDDGFCCFFGDGHWKITKGSLVVARGNKSSNLYSLQ-S 401
Query: 220 EV*NHVINVIEQPSVS-LWHRRLGHMSKRGMEILSHYGYLPGFSFQDFKFCEHCVYGKQ 47 V + +NV+E+ S LWH+RLGHMS +G++ L+ L G C HC+ GKQ Sbjct: 402 SVSDDSVNVVEKECASELWHKRLGHMSVKGIDYLAKKSKLSGVKEAKLDKCVHCLAGKQ 460
>tr|A5BC72|A5BC72_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006839 PE=4 SV=1 Length = 1211
Score = 103 bits (256), Expect = 6e-21 Identities = 49/116 (42%), Positives = 72/116 (62%) Frame = -2
Query: 394 LKNVRYVPAIRKSLISTGKLDDAGYVTVFGNNA*RISKGSMTVAHGRKSGTLYTLHVSEV 215 L+ VR++P +R++LIS G+LDD G+ +F +++KG +AHG+K+GTLY Sbjct: 281 LEKVRHIPELRRNLISIGQLDDEGHAILFVGGTWKVTKGXRVLAHGKKTGTLYMTSCPR- 339
Query: 214 *NHVINVIEQPSVSLWHRRLGHMSKRGMEILSHYGYLPGFSFQDFKFCEHCVYGKQ 47 + ++ SLWHRRLGHMS++GM++L G LP DF CE C+ GKQ Sbjct: 340 -DTIVVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQ 394
>tr|A5B4R8|A5B4R8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018405 PE=4 SV=1 Length = 1302
Score = 102 bits (255), Expect = 7e-21 Identities = 50/130 (38%), Positives = 78/130 (60%) Frame = -2
Query: 400 LWLKNVRYVPAIRKSLISTGKLDDAGYVTVFGNNA*RISKGSMTVAHGRKSGTLYTLHVS 221 L LKNV+++P IR +LISTGKLDD G+ F ++ ++++GSM +A G KS +LY + Sbjct: 212 LTLKNVKHIPDIRMNLISTGKLDDEGFXNTFRDSQWKLTRGSMXIAKGNKSSSLYLMQAR 271
Query: 220 EV*NHVINVIEQPSVSLWHRRLGHMSKRGMEILSHYGYLPGFSFQDFKFCEHCVYGKQTQ 41 + + + V + + LWH RLGHMS++G+ IL+ L K C HC+ GK T+ Sbjct: 272 VIDSSINAVDDDSTFELWHNRLGHMSEKGLMILAKKNLLSXMKKGSLKRCAHCLAGKXTR 331
Query: 40 EPHRSKRNRR 11 ++ + R Sbjct: 332 VAFKTLHHTR 341
>tr|A5AVU6|A5AVU6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_024659 PE=4 SV=1 Length = 1287
Score = 102 bits (255), Expect = 7e-21 Identities = 51/117 (43%), Positives = 75/117 (64%), Gaps = 1/117 (0%) Frame = -2
Query: 394 LKNVRYVPAIRKSLISTGKLDDAGYVTVFGNNA*RISKGSMTVAHGRKSGTLYTLHVSEV 215 L+ VR++P +R++LIS G+LDD G+ +F +++KG+ +AHG+K+GTLY ++ Sbjct: 342 LEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLAHGKKTGTLY---MTSC 398
Query: 214 *NHVINVIE-QPSVSLWHRRLGHMSKRGMEILSHYGYLPGFSFQDFKFCEHCVYGKQ 47 I V + SLWHRRLGHMS++GM++L G LP DF CE C+ GKQ Sbjct: 399 PRDTIAVADASTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQ 455
>tr|A5B0V5|A5B0V5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008497 PE=4 SV=1 Length = 1149
Score = 100 bits (250), Expect = 3e-20 Identities = 49/116 (42%), Positives = 71/116 (61%) Frame = -2
Query: 394 LKNVRYVPAIRKSLISTGKLDDAGYVTVFGNNA*RISKGSMTVAHGRKSGTLYTLHVSEV 215 L+ VR++P +R++LIS G+LDD G+ +F +++KG+ +A G+K+GTLY Sbjct: 305 LEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLYMTSCPR- 363
Query: 214 *NHVINVIEQPSVSLWHRRLGHMSKRGMEILSHYGYLPGFSFQDFKFCEHCVYGKQ 47 N + SLWHRRLGHMS++GM++L G LP DF CE C+ GKQ Sbjct: 364 -NTIAVADVSTDTSLWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQ 418
>tr|A5BWL7|A5BWL7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038864 PE=4 SV=1 Length = 1172
Score = 100 bits (249), Expect = 4e-20 Identities = 51/120 (42%), Positives = 77/120 (64%), Gaps = 2/120 (1%) Frame = -2
Query: 400 LWL-KNVRYVPAIRKSLISTGKLDDAGYVTVFGNNA*RISKGSMTVAHGRKSGTLYTLHV 224 +WL + VR++P +R++LIS G+LDD G+ +F +++KG+ +A G+K+GTLY + Sbjct: 271 IWLLEKVRHIPDLRRNLISVGQLDDEGHAILFVGGTWKVTKGARVLARGKKTGTLY---M 327
Query: 223 SEV*NHVINVIE-QPSVSLWHRRLGHMSKRGMEILSHYGYLPGFSFQDFKFCEHCVYGKQ 47 + I V + + SLWHRRLGHMS++GM++L G LP DF CE C+ GKQ Sbjct: 328 TSCPRDTIAVADASTNTSLWHRRLGHMSEKGMKMLLSKGKLPELKSIDFDMCESCILGKQ 387
>tr|A5BPC1|A5BPC1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003191 PE=4 SV=1 Length = 1208
Score = 100 bits (249), Expect = 4e-20 Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 2/120 (1%) Frame = -2
Query: 394 LKNVRYVPAIRKSLISTGKLDDAGYVTVFGNNA*RISKGSMTVAHGRKSGTLYTLHVSEV 215 L++VRY+P ++++LIS G LD +GY N+ R+++GS+TV G LYTL V Sbjct: 317 LEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVMKGTIKNGLYTLIGQTV 376
Query: 214 *NHVINVIEQP--SVSLWHRRLGHMSKRGMEILSHYGYLPGFSFQDFKFCEHCVYGKQTQ 41 V V+++ + LWH+RLGH+S RG++ L G L + D FCEHCV+GK T+ Sbjct: 377 TGKVSTVLKEDVGTTKLWHQRLGHISHRGLQELEKQGVLGNYKLTDLPFCEHCVFGKATR 436
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