BP915300
Clone id YMU001_000069_H08
Library
Length 594
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_H08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GGAGTTTGCCATCTCTGTAATGCAGGAGTCAATTGGGTGATAAAGGCTGATAAAGGAAAA
AGGGTAAGCTTTTGTTCTGTGCAGTCCGAAGTAGCTGAGCCTTACCTTCTGTTGTGCGGC
TTAACACGTGAGGACGTACTAAAAAGATTTCTATTTGTGGAAGGACCAGGGCAATTTTCA
CAGGCCTCTACAGCTGCACTTAGAGTGGCCCTCTACTTGCCTTTTCCTTACCCTCTACTC
GGTGCCCTACTGGTGATCCCAACTCCCTTAAGAGATGCGGTTTATGATTTTGTTGCAAGC
CGGCGGTACAAATGGTTTGGTCGAGCCAAGAATTGCATTTTACCAAAGGATGATGTTCTT
GATCATTTTATTGACAGGAATGAAATAATTGCCAAGTACAGGCAGAAGAAAGAATTCTAG
ATAACATTTGAGGTTTTTTTATGTAAAGGGAGGCAATTAAAGTTGAAATCTGTGCAGGGC
TAATTGTGTGAGATAGAGGATAGACATACAAGCATTGATCTTTATGTTATGTCATGCCAC
AATGGGTTCAAACCAGAGCTCTAGTTCTTTTGTACATCTTCCTATATTTGCTTG
■■Homology search results ■■ -
sp_hit_id P40761
Definition sp|P40761|YUXK_BACSU Uncharacterized protein yuxK OS=Bacillus subtilis
Align length 124
Score (bit) 99.0
E-value 2.0e-20
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915300|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_H08.
(594 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P40761|YUXK_BACSU Uncharacterized protein yuxK OS=Bacillus su... 99 2e-20
sp|Q9SSR1|Y1259_ARATH DCC family protein At1g52590, chloroplasti... 70 6e-12
sp|Q96HP0|DOCK6_HUMAN Dedicator of cytokinesis protein 6 OS=Homo... 32 1.9

>sp|P40761|YUXK_BACSU Uncharacterized protein yuxK OS=Bacillus
subtilis GN=yuxK PE=3 SV=1
Length = 137

Score = 99.0 bits (245), Expect = 2e-20
Identities = 51/124 (41%), Positives = 70/124 (56%)
Frame = +1

Query: 1 GVCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFS 180
GVC+LCN V ++IK D +SF S+QSE + L GL D F+F+E GQ
Sbjct: 15 GVCNLCNGAVQFIIKRDPDGLISFTSLQSETGQSLLKKSGLPT-DRFDSFVFIED-GQVY 72

Query: 181 QASTAALRVALYLPFPYPLLGALLVIPTPLRDAVYDFVASRRYKWFGRAKNCILPKDDVL 360
STAA++V +L P+ L +P P+RD VY F+A RYKWFG+ C+LP +
Sbjct: 73 TKSTAAIKVFRHLRGPWRLFVLFFAVPKPVRDMVYSFIAKNRYKWFGKKNECMLPSPSIK 132

Query: 361 DHFI 372
F+
Sbjct: 133 KRFL 136


>sp|Q9SSR1|Y1259_ARATH DCC family protein At1g52590, chloroplastic
OS=Arabidopsis thaliana GN=At1g52590 PE=1 SV=1
Length = 172

Score = 70.5 bits (171), Expect = 6e-12
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Frame = +1

Query: 1 GVCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFS 180
GVC+LCN GV +V D+ + + F ++QSE + LL G +D+ + VE +
Sbjct: 60 GVCNLCNGGVKFVRDHDRNRSIRFEALQSEAGKKLLLRSGRAPDDI-SSVVLVENDRSYI 118

Query: 181 QASTAALRVALYLPFPYPLLGALL-VIPTPLRDAVYDFVASRRYKWFGRAKNCIL 342
+ S A L++ Y+ P+P L L P +RD +Y+ VA+ RY FGR+ +C L
Sbjct: 119 K-SEAVLKIMKYIDLPFPQLAFFLQFAPLFVRDFLYENVANNRYAMFGRSDSCEL 172


>sp|Q96HP0|DOCK6_HUMAN Dedicator of cytokinesis protein 6 OS=Homo
sapiens GN=DOCK6 PE=1 SV=2
Length = 2047

Score = 32.3 bits (72), Expect = 1.9
Identities = 17/48 (35%), Positives = 28/48 (58%)
Frame = +1

Query: 49 DKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFSQAST 192
D R + +V++ VAE YL L + R+ + + F EGPGQ S+ ++
Sbjct: 1147 DTDPRYAEATVKARVAELYLPLLSIARDTLPRLHDFAEGPGQRSRLAS 1194


tr_hit_id A9SMP9
Definition tr|A9SMP9|A9SMP9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 129
Score (bit) 200.0
E-value 4.0e-50
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915300|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_H08.
(594 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SMP9|A9SMP9_PHYPA Predicted protein (Fragment) OS=Physcomit... 200 4e-50
tr|A9P9P3|A9P9P3_POPTR Putative uncharacterized protein OS=Popul... 179 1e-43
tr|A7Q2I0|A7Q2I0_VITVI Chromosome chr1 scaffold_46, whole genome... 179 1e-43
tr|Q9LR85|Q9LR85_ARATH T23E23.25 OS=Arabidopsis thaliana PE=4 SV=1 175 2e-42
tr|B8A246|B8A246_MAIZE Putative uncharacterized protein OS=Zea m... 172 2e-41
tr|B6T926|B6T926_MAIZE Nucleic acid binding protein OS=Zea mays ... 172 2e-41
tr|A2YB36|A2YB36_ORYSI Putative uncharacterized protein OS=Oryza... 170 5e-41
tr|Q67VC9|Q67VC9_ORYSJ Os06g0237100 protein OS=Oryza sativa subs... 170 6e-41
tr|A5B0T4|A5B0T4_VITVI Putative uncharacterized protein OS=Vitis... 164 4e-39
tr|B2D2H0|B2D2H0_BRAOL RNase H domain-containing protein OS=Bras... 148 3e-34
tr|Q3IKZ3|Q3IKZ3_PSEHT Putative uncharacterized protein OS=Pseud... 103 6e-21
tr|A7Z865|A7Z865_BACA2 YuxK OS=Bacillus amyloliquefaciens (strai... 95 3e-18
tr|A3XIN1|A3XIN1_9FLAO Putative uncharacterized protein OS=Leeuw... 95 3e-18
tr|Q4KEG5|Q4KEG5_PSEF5 Putative uncharacterized protein OS=Pseud... 92 2e-17
tr|Q053G3|Q053G3_LEPBL Putative uncharacterized protein OS=Lepto... 92 2e-17
tr|Q04RB8|Q04RB8_LEPBJ Putative uncharacterized protein OS=Lepto... 92 2e-17
tr|A2TPF2|A2TPF2_9FLAO Putative uncharacterized protein OS=Dokdo... 92 2e-17
tr|Q1D2G9|Q1D2G9_MYXXD Putative uncharacterized protein OS=Myxoc... 91 5e-17
tr|A0M1V3|A0M1V3_GRAFK Protein containing DUF393 OS=Gramella for... 91 5e-17
tr|Q65FK0|Q65FK0_BACLD Conserved protein YuxK OS=Bacillus lichen... 89 1e-16
tr|Q26ED2|Q26ED2_9BACT Putative uncharacterized protein OS=Flavo... 89 1e-16
tr|Q2BP36|Q2BP36_9GAMM Putative uncharacterized protein OS=Neptu... 89 2e-16
tr|A6ETT9|A6ETT9_9BACT Putative uncharacterized protein OS=unide... 89 2e-16
tr|A1ZR04|A1ZR04_9SPHI Conserved protein YuxK OS=Microscilla mar... 89 2e-16
tr|B4X4D7|B4X4D7_9GAMM Putative uncharacterized protein OS=Alcan... 86 2e-15
tr|A8UMA7|A8UMA7_9FLAO Putative uncharacterized protein OS=Flavo... 85 4e-15
tr|Q5WIR8|Q5WIR8_BACSK Putative uncharacterized protein OS=Bacil... 84 6e-15
tr|B4AHQ1|B4AHQ1_BACPU YuxK OS=Bacillus pumilus ATCC 7061 GN=BAT... 84 6e-15
tr|A3U9R9|A3U9R9_9FLAO YuxK OS=Croceibacter atlanticus HTCC2559 ... 84 6e-15
tr|Q1VX35|Q1VX35_9FLAO YuxK OS=Psychroflexus torquis ATCC 700755... 84 8e-15

>tr|A9SMP9|A9SMP9_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_18248 PE=4 SV=1
Length = 139

Score = 200 bits (509), Expect = 4e-50
Identities = 90/129 (69%), Positives = 107/129 (82%)
Frame = +1

Query: 1 GVCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFS 180
GVCHLCNAGVNWVI+ DK K +SFC+VQS+ AEPYLLLCG+TREDVL+RF+F+EGPG+
Sbjct: 11 GVCHLCNAGVNWVIRVDKKKAISFCAVQSKAAEPYLLLCGVTREDVLRRFVFIEGPGEIH 70

Query: 181 QASTAALRVALYLPFPYPLLGALLVIPTPLRDAVYDFVASRRYKWFGRAKNCILPKDDVL 360
ASTAAL+VA YLPFPY L VIP +R+AVYD+VA RRY+WFG++K CILP DVL
Sbjct: 71 HASTAALKVASYLPFPYSALSVFFVIPATIRNAVYDYVAKRRYRWFGQSKECILPSSDVL 130

Query: 361 DHFIDRNEI 387
D FID+ EI
Sbjct: 131 DRFIDKLEI 139


>tr|A9P9P3|A9P9P3_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 220

Score = 179 bits (454), Expect = 1e-43
Identities = 83/130 (63%), Positives = 103/130 (79%), Gaps = 1/130 (0%)
Frame = +1

Query: 4 VCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFSQ 183
VCHLC+ GV WVI+ADK ++ FC +QS+ AEPYL LCGL REDVL+RFLF+EGPG + Q
Sbjct: 84 VCHLCHRGVKWVIEADKYGKIKFCCLQSKAAEPYLALCGLNREDVLRRFLFIEGPGSYHQ 143

Query: 184 ASTAALRVALYLPFPYPLLGALLVIPTPLRDAVYDFVASRRYKWFGRAKNCILPKD-DVL 360
ASTAALRV YLP PY LL+IPTP+RDAVYD+VA RY WFG+A C++ K+ ++L
Sbjct: 144 ASTAALRVMSYLPQPYSAPSTLLIIPTPIRDAVYDYVAKHRYGWFGKADECLVLKEKELL 203

Query: 361 DHFIDRNEII 390
+ FIDR+EII
Sbjct: 204 ERFIDRDEII 213


>tr|A7Q2I0|A7Q2I0_VITVI Chromosome chr1 scaffold_46, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00028893001
PE=4 SV=1
Length = 216

Score = 179 bits (453), Expect = 1e-43
Identities = 82/135 (60%), Positives = 107/135 (79%), Gaps = 1/135 (0%)
Frame = +1

Query: 1 GVCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFS 180
GVCHLC+ GV VI ADK +++ FC +QS+ AEPYL +CGL REDVL+RFLF+EGPG +
Sbjct: 79 GVCHLCHQGVKRVIAADKHRKIKFCCLQSKAAEPYLRVCGLDREDVLRRFLFIEGPGLYH 138

Query: 181 QASTAALRVALYLPFPYPLLGALLVIPTPLRDAVYDFVASRRYKWFGRAKNCILPKD-DV 357
QASTAALRV YLP PY L LL+IPTPLRDA+YD+VA RRY WFG+ ++C++ K+ ++
Sbjct: 139 QASTAALRVLSYLPLPYSALSTLLIIPTPLRDAIYDYVAKRRYDWFGKEEDCLVLKEKEM 198

Query: 358 LDHFIDRNEIIAKYR 402
L+ FIDR E++ + R
Sbjct: 199 LERFIDREEMLDQNR 213


>tr|Q9LR85|Q9LR85_ARATH T23E23.25 OS=Arabidopsis thaliana PE=4 SV=1
Length = 213

Score = 175 bits (443), Expect = 2e-42
Identities = 79/131 (60%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Frame = +1

Query: 1 GVCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFS 180
GVCHLC+ GV W+IKADK +++ FC +QS+ AEPYL + G+TREDV KRFLF+EG G +
Sbjct: 80 GVCHLCHGGVKWIIKADKYRKIKFCCLQSKAAEPYLEVSGVTREDVQKRFLFIEGLGFYH 139

Query: 181 QASTAALRVALYLPFPYPLLGALLVIPTPLRDAVYDFVASRRYKWFGRAKNCILPKD-DV 357
QASTAALRV YLP PY L A ++PTPLRD+VYD+VA RY WFG+A++C++ D ++
Sbjct: 140 QASTAALRVVSYLPLPYSALNAFSIVPTPLRDSVYDYVAKNRYDWFGKAEDCLVLNDKEL 199

Query: 358 LDHFIDRNEII 390
L+ FIDR+E+I
Sbjct: 200 LERFIDRDELI 210


>tr|B8A246|B8A246_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 211

Score = 172 bits (435), Expect = 2e-41
Identities = 78/131 (59%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
Frame = +1

Query: 1 GVCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFS 180
GVCHLC+ GV WVI+ DK ++ FC VQS+ AEPYL L G+ REDVL+R LFVEGP +
Sbjct: 72 GVCHLCHRGVKWVIRTDKHAKIKFCCVQSKAAEPYLRLVGMDREDVLRRVLFVEGPEAYY 131

Query: 181 QASTAALRVALYLPFPYPLLGALLVIPTPLRDAVYDFVASRRYKWFGRAKNCILPKD-DV 357
+ STAAL+VA YLP PY +L +LL++PTPLRDAVYD++A RY WFG+ CI+ KD ++
Sbjct: 132 EGSTAALKVASYLPPPYSVLSSLLIVPTPLRDAVYDYIAKNRYDWFGKDDECIVTKDKEI 191

Query: 358 LDHFIDRNEII 390
L+ FIDR E++
Sbjct: 192 LERFIDREEML 202


>tr|B6T926|B6T926_MAIZE Nucleic acid binding protein OS=Zea mays
PE=2 SV=1
Length = 211

Score = 172 bits (435), Expect = 2e-41
Identities = 78/131 (59%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
Frame = +1

Query: 1 GVCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFS 180
GVCHLC+ GV WVI+ DK ++ FC VQS+ AEPYL L G+ REDVL+R LFVEGP +
Sbjct: 72 GVCHLCHRGVKWVIRTDKHAKIKFCCVQSKAAEPYLRLVGMDREDVLRRVLFVEGPEAYY 131

Query: 181 QASTAALRVALYLPFPYPLLGALLVIPTPLRDAVYDFVASRRYKWFGRAKNCILPKD-DV 357
+ STAAL+VA YLP PY +L +LL++PTPLRDAVYD++A RY WFG+ CI+ KD ++
Sbjct: 132 EGSTAALKVASYLPPPYSVLSSLLIVPTPLRDAVYDYIAKNRYDWFGKDDECIVTKDKEI 191

Query: 358 LDHFIDRNEII 390
L+ FIDR E++
Sbjct: 192 LERFIDREEML 202


>tr|A2YB36|A2YB36_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_22313 PE=4 SV=1
Length = 209

Score = 170 bits (431), Expect = 5e-41
Identities = 77/131 (58%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
Frame = +1

Query: 1 GVCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFS 180
GVCHLC+ GV WVIKADK ++ FC VQS+ AEPYL L G+ REDVL+R LF+EGP +
Sbjct: 71 GVCHLCHRGVKWVIKADKHAKIRFCCVQSKAAEPYLRLVGMDREDVLRRVLFIEGPETYY 130

Query: 181 QASTAALRVALYLPFPYPLLGALLVIPTPLRDAVYDFVASRRYKWFGRAKNCILPKD-DV 357
+ STAAL+VA YLP PY L +LL+IP PLRDA+YD++A RY WFG+ CI+ K+ ++
Sbjct: 131 EGSTAALKVASYLPLPYSALSSLLIIPAPLRDAIYDYIAKNRYDWFGKDDECIVTKNKEL 190

Query: 358 LDHFIDRNEII 390
L+ FIDR+E++
Sbjct: 191 LERFIDRDEML 201


>tr|Q67VC9|Q67VC9_ORYSJ Os06g0237100 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0068B06.4 PE=4 SV=1
Length = 209

Score = 170 bits (430), Expect = 6e-41
Identities = 77/131 (58%), Positives = 100/131 (76%), Gaps = 1/131 (0%)
Frame = +1

Query: 1 GVCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFS 180
GVCHLC+ GV WVIKADK ++ FC VQS+ AEPYL L G+ REDVL+R LF+EGP +
Sbjct: 71 GVCHLCHRGVKWVIKADKHAKIRFCCVQSKAAEPYLRLVGMDREDVLRRVLFIEGPEAYY 130

Query: 181 QASTAALRVALYLPFPYPLLGALLVIPTPLRDAVYDFVASRRYKWFGRAKNCILPKD-DV 357
+ STAAL+VA YLP PY L +LL+IP PLRDA+YD++A RY WFG+ CI+ K+ ++
Sbjct: 131 EGSTAALKVASYLPLPYSALSSLLIIPAPLRDAIYDYIAKNRYDWFGKDDECIVTKNKEL 190

Query: 358 LDHFIDRNEII 390
L+ FIDR E++
Sbjct: 191 LERFIDREEML 201


>tr|A5B0T4|A5B0T4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_018709 PE=4 SV=1
Length = 224

Score = 164 bits (415), Expect = 4e-39
Identities = 79/143 (55%), Positives = 105/143 (73%), Gaps = 9/143 (6%)
Frame = +1

Query: 1 GVCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFS 180
GVCHLC+ GV VI ADK +++ FC +QS+ AEPYL +CGL REDVL+RFLF+EGPG +
Sbjct: 79 GVCHLCHQGVKRVIAADKHRKIKFCCLQSKAAEPYLRVCGLDREDVLRRFLFIEGPGLYH 138

Query: 181 QASTAALRVAL--------YLPFPYPLLGALLVIPTPLRDAVYDFVASRRYKWFGRAKNC 336
QAST AL + L LP PY L LL+IPTPLRDA+YD+VA RRY WFG+ ++C
Sbjct: 139 QASTDALFMELMCSNMHNMQLPLPYSALSTLLIIPTPLRDAIYDYVAKRRYDWFGKEEDC 198

Query: 337 ILPKD-DVLDHFIDRNEIIAKYR 402
++ K+ ++L+ FIDR E++ + R
Sbjct: 199 LVLKEKEMLERFIDREEMLDQNR 221


>tr|B2D2H0|B2D2H0_BRAOL RNase H domain-containing protein
OS=Brassica oleracea PE=4 SV=1
Length = 492

Score = 148 bits (373), Expect = 3e-34
Identities = 68/131 (51%), Positives = 97/131 (74%), Gaps = 1/131 (0%)
Frame = +1

Query: 1 GVCHLCNAGVNWVIKADKGKRVSFCSVQSEVAEPYLLLCGLTREDVLKRFLFVEGPGQFS 180
GVCHLC+ GV W+IKADK +++ FC +QS+ AEPYL + G+T+EDV KRFLF+EG G +
Sbjct: 373 GVCHLCHGGVKWIIKADKYRKIKFCCLQSKAAEPYLTVSGVTKEDVQKRFLFIEGLGSYH 432

Query: 181 QASTAALRVALYLPFPYPLLGALLVIPTPLRDAVYDFVASRRYKWFGRAKNCILPKD-DV 357
QASTA L A ++P+PLRD+VYD+VA+ RY WFG+A++C++ K+ ++
Sbjct: 433 QASTA--------------LKAFAIVPSPLRDSVYDYVANNRYNWFGKAEDCLVLKEKEL 478

Query: 358 LDHFIDRNEII 390
L+ FIDR+E+I
Sbjct: 479 LERFIDRDELI 489