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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915303
Clone id YMU001_000069_H11
Library
Length 530
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000069_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AACCAAGCAGGAGACGACAGGCGAGCCAGAGACACTAAGAAAGTAATGGTCTACCTCTTC
CAGCAACTGATCTGGCATCGCAGTAAACTTGATGCTGGACATCACGTCAGCAAGGTAAGA
GTGCGGCTGTGTCTCTTCTTTCAGGAGAATGGGCTCATAATGCTTGCAAAGGTCCTCGTA
GTTAAGGATAGAGAAATTCTCGGGCCACTCCCCCGACAGGAAGTAGCCAGGGGCCTCGTT
CTGAGGCGGAGATGTAGTCGTAGCCGCAGCAACAAGATCGTCCTCCTTGACAGAAGCGGA
GGTGATAGCAGACGAAGATCGAGGACTGCGAAGCCCTAAACGCACCAACGGTGATGCAGA
AAAGCTAGACTTCGCAGCTACATGCGAAGAAGAGAGGGCGAAGTGGGAATGCAGGGTGAG
GGCCGCCATGAGGGGTTTGCAGCAGATTTCTTCGTTCTTGCGGGTGGATGAAGAAGACGA
GGGGGCTTTTAAGAGGGGGTGTCCATCGCCATAGCTGCTCACATAAGATC
■■Homology search results ■■ -
sp_hit_id Q48558
Definition sp|Q48558|PEPDA_LACHE Dipeptidase A OS=Lactobacillus helveticus
Align length 45
Score (bit) 30.8
E-value 4.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915303|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_H11.
         (530 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q48558|PEPDA_LACHE Dipeptidase A OS=Lactobacillus helveticus ...    31   4.2  
sp|A4VPP0|IF2_PSEU5 Translation initiation factor IF-2 OS=Pseudo...    30   5.5  
sp|O13919|PST2_SCHPO Paired amphipathic helix protein pst2 OS=Sc...    30   7.2  
sp|P65082|Y3447_MYCBO Uncharacterized protein Mb3447c OS=Mycobac...    30   9.4  
sp|P65081|Y3413_MYCTU Uncharacterized protein Rv3413c/MT3522 OS=...    30   9.4  
sp|Q8WXI7|MUC16_HUMAN Mucin-16 OS=Homo sapiens GN=MUC16 PE=1 SV=2      30   9.4  

>sp|Q48558|PEPDA_LACHE Dipeptidase A OS=Lactobacillus helveticus
           GN=pepDA PE=1 SV=1
          Length = 474

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -3

Query: 204 PENFSILNYEDLCKHYEPILLKEETQPHSYLADVMSSIKFTAMPD 70
           PE F ++N ED  KHY  ++ K++      LA+  + +++T+ PD
Sbjct: 35  PEGFKVVNPEDQPKHYTSVISKQKIDDED-LAE--TPLRYTSAPD 76


>sp|A4VPP0|IF2_PSEU5 Translation initiation factor IF-2
           OS=Pseudomonas stutzeri (strain A1501) GN=infB PE=3 SV=1
          Length = 837

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 18/80 (22%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +2

Query: 263 AAATRSSSLTEAEVIADEDRGLRSPKRTNGDAEKLDFAATCEEERA-KWECRVRAAMRGL 439
           AAA  +SS   A+V+A  +    +P+R   +  +++   + ++ER  +   + R +++  
Sbjct: 152 AAAESASSAEPAQVVAAVEAAAPAPERKKEEPRRVEKPRSDDDERRDRKHAQHRPSLKTK 211

Query: 440 QQISSFLRVDEEDEGAFKRG 499
             ++  +R  E++   F+RG
Sbjct: 212 APLARTVRSGEDEADGFRRG 231


>sp|O13919|PST2_SCHPO Paired amphipathic helix protein pst2
           OS=Schizosaccharomyces pombe GN=pst2 PE=1 SV=1
          Length = 1075

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 18/57 (31%), Positives = 30/57 (52%)
 Frame = -3

Query: 216 SGEWPENFSILNYEDLCKHYEPILLKEETQPHSYLADVMSSIKFTAMPDQLLEEVDH 46
           SG   ++ S  +  D   +  P+  K+ +QP    A + +S+K+ + PD LLE  DH
Sbjct: 674 SGNKSQSNSQNSLSDESGNVTPVSKKQLSQP---AAAIKASLKYPSHPDSLLEHQDH 727


>sp|P65082|Y3447_MYCBO Uncharacterized protein Mb3447c
           OS=Mycobacterium bovis GN=Mb3447c PE=4 SV=1
          Length = 299

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 515 AMAMDTPS*KP-PRLLHPPARTKKSAANPSWRPSPCIPTSP 396
           A +  TPS KP P  + P       A NP+ +P+P  P SP
Sbjct: 257 AASPSTPSSKPEPGSIDPSLEPADEATNPAGQPAPETPVSP 297


>sp|P65081|Y3413_MYCTU Uncharacterized protein Rv3413c/MT3522
           OS=Mycobacterium tuberculosis GN=Rv3413c PE=4 SV=1
          Length = 299

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -1

Query: 515 AMAMDTPS*KP-PRLLHPPARTKKSAANPSWRPSPCIPTSP 396
           A +  TPS KP P  + P       A NP+ +P+P  P SP
Sbjct: 257 AASPSTPSSKPEPGSIDPSLEPADEATNPAGQPAPETPVSP 297


>sp|Q8WXI7|MUC16_HUMAN Mucin-16 OS=Homo sapiens GN=MUC16 PE=1 SV=2
          Length = 22152

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -1

Query: 500   TPS*KPPRLLHPPART--KKSAANPSWRPSPCI 408
             T S  PPR LH    T   +S  NPSW+ SP +
Sbjct: 9985  THSTVPPRFLHSEMTTLMSRSPENPSWKSSPFV 10017
tr_hit_id A9TIX8
Definition tr|A9TIX8|A9TIX8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 68
Score (bit) 98.2
E-value 2.0e-19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915303|Adiantum capillus-veneris mRNA, clone:
YMU001_000069_H11.
         (530 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TIX8|A9TIX8_PHYPA Predicted protein OS=Physcomitrella paten...    98   2e-19
tr|A9T9M7|A9T9M7_PHYPA Predicted protein (Fragment) OS=Physcomit...    93   7e-18
tr|A9TZ25|A9TZ25_PHYPA Predicted protein OS=Physcomitrella paten...    92   1e-17
tr|A9P0P2|A9P0P2_PICSI Putative uncharacterized protein OS=Picea...    91   5e-17
tr|Q7XRN1|Q7XRN1_ORYSJ Os04g0136700 protein OS=Oryza sativa subs...    69   1e-10
tr|A3AQJ5|A3AQJ5_ORYSJ Putative uncharacterized protein OS=Oryza...    69   1e-10
tr|Q01N18|Q01N18_ORYSA OSIGBa0147B06.5 protein OS=Oryza sativa G...    64   4e-09
tr|Q6V9H7|Q6V9H7_ORYSI Putative brown planthopper susceptibility...    59   1e-07
tr|Q6V9H6|Q6V9H6_ORYSI Brown planthopper-induced resistance prot...    59   1e-07
tr|Q6K9S2|Q6K9S2_ORYSJ cDNA clone:006-202-B08, full insert seque...    59   1e-07
tr|Q0DWE9|Q0DWE9_ORYSJ Os02g0818000 protein (Fragment) OS=Oryza ...    59   1e-07
tr|A2XB21|A2XB21_ORYSI Putative uncharacterized protein OS=Oryza...    59   1e-07
tr|B6T4C2|B6T4C2_MAIZE CBS domain containing protein OS=Zea mays...    53   1e-05
tr|B2VVI1|B2VVI1_PYRTR Putative uncharacterized protein OS=Pyren...    35   2.4  
tr|A5DDD9|A5DDD9_PICGU Putative uncharacterized protein OS=Pichi...    35   3.1  
tr|Q4P944|Q4P944_USTMA Putative uncharacterized protein OS=Ustil...    34   4.0  
tr|Q874X2|Q874X2_PODAN Predicted CDS Pa_5_6030 OS=Podospora anse...    34   5.3  
tr|Q2H570|Q2H570_CHAGB Putative uncharacterized protein OS=Chaet...    34   5.3  
tr|A9QY40|A9QY40_LOTJA Subtilase OS=Lotus japonicus GN=SbtM1 PE=...    33   6.9  

>tr|A9TIX8|A9TIX8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_146242 PE=4 SV=1
          Length = 197

 Score = 98.2 bits (243), Expect = 2e-19
 Identities = 44/68 (64%), Positives = 53/68 (77%)
 Frame = -3

Query: 216 SGEWPENFSILNYEDLCKHYEPILLKEETQPHSYLADVMSSIKFTAMPDQLLEEVDHYFL 37
           SGEW ENFS+LNYEDL K+YE +L K E QP ++LADVMS   FTA P+Q LEE+DHYF 
Sbjct: 42  SGEWAENFSLLNYEDLSKYYEDVLFKPEAQPSTHLADVMSKTIFTASPEQALEEIDHYFA 101

Query: 36  SVSGSPVV 13
            ++G PVV
Sbjct: 102 DITGVPVV 109


>tr|A9T9M7|A9T9M7_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_47558 PE=4 SV=1
          Length = 151

 Score = 93.2 bits (230), Expect = 7e-18
 Identities = 44/68 (64%), Positives = 51/68 (75%)
 Frame = -3

Query: 216 SGEWPENFSILNYEDLCKHYEPILLKEETQPHSYLADVMSSIKFTAMPDQLLEEVDHYFL 37
           SGEW ENFS+LNYEDL K+YE IL K E QP ++LAD+MS    TA P+Q LEEVD YF 
Sbjct: 1   SGEWAENFSLLNYEDLSKYYEHILFKPEAQPSTHLADIMSRTIITASPEQSLEEVDRYFY 60

Query: 36  SVSGSPVV 13
            +SG PVV
Sbjct: 61  DISGLPVV 68


>tr|A9TZ25|A9TZ25_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_152884 PE=4 SV=1
          Length = 176

 Score = 92.4 bits (228), Expect = 1e-17
 Identities = 44/72 (61%), Positives = 52/72 (72%)
 Frame = -3

Query: 228 GYFLSGEWPENFSILNYEDLCKHYEPILLKEETQPHSYLADVMSSIKFTAMPDQLLEEVD 49
           G   SGEW ENFS+LNYEDL K+YEP L K E QP + LA+VMS + + A PDQ LEEVD
Sbjct: 22  GILPSGEWSENFSLLNYEDLTKYYEPKLFKPEAQPDTILAEVMSKLMYIAFPDQSLEEVD 81

Query: 48  HYFLSVSGSPVV 13
            +F  +SG PVV
Sbjct: 82  CHFAEISGLPVV 93


>tr|A9P0P2|A9P0P2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 242

 Score = 90.5 bits (223), Expect = 5e-17
 Identities = 43/87 (49%), Positives = 61/87 (70%)
 Frame = -3

Query: 276 LVAAATTTSPPQNEAPGYFLSGEWPENFSILNYEDLCKHYEPILLKEETQPHSYLADVMS 97
           +V A+  ++  + E P   LSGEWP NFS+LN+EDL  + EP++ KEE QP ++L DVMS
Sbjct: 70  VVLASGDSADVKVETPEEVLSGEWPGNFSMLNFEDLSSYLEPMIFKEEAQPSAFLGDVMS 129

Query: 96  SIKFTAMPDQLLEEVDHYFLSVSGSPV 16
               TA  +QLLE++D++F S+SG PV
Sbjct: 130 RTIRTATAEQLLEDIDYHFASISGLPV 156


>tr|Q7XRN1|Q7XRN1_ORYSJ Os04g0136700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0095E20.4 PE=2 SV=2
          Length = 220

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = -3

Query: 273 VAAATTTSPPQNEAPGYFLSGEWPENFSILNYEDLCKHYE-PILLKEETQPHSYLADVMS 97
           VAA     P  +E P   LSGEWPENFS+L+Y DL  + E  I+  ++  P + L +VMS
Sbjct: 48  VAAVGDLRPAIDEYPEGILSGEWPENFSLLSYADLRAYLESQIVTTDQMSPTAKLGEVMS 107

Query: 96  SIKFTAMPDQLLEEVDHYFLSVSGSPVV 13
            +   AM DQ L ++D +F + SG PV+
Sbjct: 108 RLVQVAMADQRLADIDAFFAAQSGLPVL 135


>tr|A3AQJ5|A3AQJ5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_013067 PE=4 SV=1
          Length = 238

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 38/88 (43%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = -3

Query: 273 VAAATTTSPPQNEAPGYFLSGEWPENFSILNYEDLCKHYE-PILLKEETQPHSYLADVMS 97
           VAA     P  +E P   LSGEWPENFS+L+Y DL  + E  I+  ++  P + L +VMS
Sbjct: 48  VAAVGDLRPAIDEYPEGILSGEWPENFSLLSYADLRAYLESQIVTTDQMSPTAKLGEVMS 107

Query: 96  SIKFTAMPDQLLEEVDHYFLSVSGSPVV 13
            +   AM DQ L ++D +F + SG PV+
Sbjct: 108 RLVQVAMADQRLADIDAFFAAQSGLPVL 135


>tr|Q01N18|Q01N18_ORYSA OSIGBa0147B06.5 protein OS=Oryza sativa
           GN=OSIGBa0147B06.5 PE=4 SV=1
          Length = 224

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
 Frame = -3

Query: 270 AAATTTSPPQNEAPGYFLSGEWPENFSILNYEDLCKHYE-PILLKEETQPHSYLADVMSS 94
           AA     P  +E P   LSGEWPENFS+L+Y DL  + E  I+  ++  P + L +VMS 
Sbjct: 53  AAVGDLRPAIDEYPEGILSGEWPENFSLLSYADLRAYLESQIVTTDQMSPTAKLGEVMSR 112

Query: 93  IKFTAMPDQLLEEVDHYFLSVSGSPVV 13
               AM DQ L ++D +F + SG PV+
Sbjct: 113 PVQVAMADQRLADIDAFFGAQSGLPVL 139


>tr|Q6V9H7|Q6V9H7_ORYSI Putative brown planthopper susceptibility
           protein Hd002A OS=Oryza sativa subsp. indica PE=2 SV=1
          Length = 173

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = -3

Query: 240 NEAPGYFLSGEWPENFSILNYEDLCKHY--EPILLKEETQPHSYLADVMSSIKFTAMPDQ 67
           +E P   +SGEWPENFS+L+Y+DL  +   +    + + Q  + L++ MS+    A  +Q
Sbjct: 10  DENPEAIISGEWPENFSLLSYDDLRAYLQSQEAAAQADNQRVALLSEAMSAPVLVATAEQ 69

Query: 66  LLEEVDHYFLSVSGSPVV 13
            LEEV+ +F +VSG PV+
Sbjct: 70  TLEEVECHFETVSGLPVI 87


>tr|Q6V9H6|Q6V9H6_ORYSI Brown planthopper-induced resistance protein
           1 OS=Oryza sativa subsp. indica GN=Bi1 PE=2 SV=1
          Length = 284

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = -3

Query: 240 NEAPGYFLSGEWPENFSILNYEDLCKHY--EPILLKEETQPHSYLADVMSSIKFTAMPDQ 67
           +E P   +SGEWPENFS+L+Y+DL  +   +    + + Q  + L++ MS+    A  +Q
Sbjct: 133 DENPEAIISGEWPENFSLLSYDDLRAYLQSQEAAAQADNQRVALLSEAMSAPVLVATAEQ 192

Query: 66  LLEEVDHYFLSVSGSPVV 13
            LEEV+ +F +VSG PV+
Sbjct: 193 TLEEVECHFETVSGLPVI 210


>tr|Q6K9S2|Q6K9S2_ORYSJ cDNA clone:006-202-B08, full insert sequence
           OS=Oryza sativa subsp. japonica GN=OJ1202_E07.3-1 PE=2
           SV=1
          Length = 212

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
 Frame = -3

Query: 240 NEAPGYFLSGEWPENFSILNYEDLCKHY--EPILLKEETQPHSYLADVMSSIKFTAMPDQ 67
           +E P   +SGEWPENFS+L+Y+DL  +   +    + + Q  + L++ MS+    A  +Q
Sbjct: 49  DENPEAIISGEWPENFSLLSYDDLRAYLQSQEAAAQADNQRVALLSEAMSAPVLVATAEQ 108

Query: 66  LLEEVDHYFLSVSGSPVV 13
            LEEV+ +F +VSG PV+
Sbjct: 109 TLEEVECHFETVSGLPVI 126