NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915321
Clone id YMU001_000070_B08
Library
Length 361
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_B08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTATTTATTTCAACCCGTCTCCACTAGTCATATCAAGTCATGACAATGCTACAGCATTAC
CTACTCATAGCCAAAAGTGCAATGTTTCAGCATGACTAAAACCAGATGGTTGGAAAAATC
CTTATGCCAATAATTACAGCTTCAATCTTTGAGACTCTTTTGAGCTCCCCCAATGTTTTT
GGAAGACCTTGCAACTTTTTTGATCAGTCATGGGTAAGAGGGTGGTTATCTCTAATCATT
GCAAAATTGACTTGCTCGAGGTTATCACAAACACAAAGTTTGTTGGTCTTCTTAGGCACC
ACAACAATAGGAGACAGTCACACTGTAAGTTCTGTTTCACAAATGAATTTTGTCTCTAGC
A
■■Homology search results ■■ -
sp_hit_id Q9ES38
Definition sp|Q9ES38|S27A5_RAT Bile acyl-CoA synthetase OS=Rattus norvegicus
Align length 60
Score (bit) 30.8
E-value 2.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915321|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_B08.
         (361 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ES38|S27A5_RAT Bile acyl-CoA synthetase OS=Rattus norvegicu...    31   2.2  
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa...    31   2.2  
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa...    31   2.2  
sp|Q4IFH8|HIR3_GIBZE Histone transcription regulator 3 homolog O...    31   2.2  
sp|P36189|FAS_ANSAN Fatty acid synthase (Fragment) OS=Anser anse...    29   8.4  

>sp|Q9ES38|S27A5_RAT Bile acyl-CoA synthetase OS=Rattus norvegicus
           GN=Slc27a5 PE=1 SV=1
          Length = 690

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
 Frame = +1

Query: 109 VGKILMPIITASIFETLLSSPNVF--------GRPCNFFDQSWVRGWLSLIIAKLTCSRL 264
           +G+ L P  TA      L  P  F        GRP   +  SW+  WLSL  A LT S L
Sbjct: 20  LGQPLWPAATALALRWFLGDPTCFVLLGLAFLGRP---WISSWIPHWLSLAAAALTLSLL 76


>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
           OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
          Length = 1498

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -3

Query: 359 LETKFICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           L+ KFI  ++     SP+V+VPKK     +C +   +N A I D  PL
Sbjct: 646 LDNKFIVPSKSPC-SSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPL 692


>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
           OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
          Length = 1547

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -3

Query: 359 LETKFICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           L+ KFI  ++     SP+V+VPKK     +C +   +N A I D  PL
Sbjct: 620 LDNKFIVPSKSPC-SSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPL 666


>sp|Q4IFH8|HIR3_GIBZE Histone transcription regulator 3 homolog
            OS=Gibberella zeae GN=HIR3 PE=3 SV=1
          Length = 2020

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 21/71 (29%), Positives = 30/71 (42%)
 Frame = +3

Query: 99   KPDGWKNPYANNYSFNL*DSFELPQCFWKTLQLF*SVMGKRVVISNHCKIDLLEVITNTK 278
            KPD WKNPY             L +C+WK  Q     +  + + S   KI L+ +I   K
Sbjct: 1386 KPDNWKNPYM------------LSKCYWKMYQTPDDQLDVKDITS---KIGLMTLIDTLK 1430

Query: 279  FVGLLRHHNNR 311
                + H+  R
Sbjct: 1431 KAVEVAHNARR 1441


>sp|P36189|FAS_ANSAN Fatty acid synthase (Fragment) OS=Anser anser
           anser GN=FASN PE=1 SV=1
          Length = 352

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = -3

Query: 305 VVVPKKTNKLCVCDNLEQVNFAMIRDNHPLTHD*SK---KLQGLPKTLGELKRVSKIEAV 135
           VV+     KL   +NL++    ++     +T D  +    + GLPK  G+LK +SK +A 
Sbjct: 4   VVIAGIAGKLPESENLQEFWEKLLNGVDMVTEDDRRWKPGMYGLPKRNGKLKDISKFDAS 63

Query: 134 IIGI 123
             G+
Sbjct: 64  FFGV 67
tr_hit_id A5BEB6
Definition tr|A5BEB6|A5BEB6_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 48
Score (bit) 39.7
E-value 0.077
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915321|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_B08.
         (361 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BEB6|A5BEB6_VITVI Putative uncharacterized protein OS=Vitis...    40   0.077
tr|A5BQ24|A5BQ24_VITVI Putative uncharacterized protein OS=Vitis...    38   0.22 
tr|A5AKW2|A5AKW2_VITVI Putative uncharacterized protein OS=Vitis...    38   0.22 
tr|A5C0C5|A5C0C5_VITVI Putative uncharacterized protein OS=Vitis...    38   0.29 
tr|A5AZJ0|A5AZJ0_VITVI Putative uncharacterized protein OS=Vitis...    38   0.29 
tr|A5BDR8|A5BDR8_VITVI Putative uncharacterized protein OS=Vitis...    37   0.38 
tr|A5B6V1|A5B6V1_VITVI Putative uncharacterized protein OS=Vitis...    37   0.38 
tr|A5BFW3|A5BFW3_VITVI Putative uncharacterized protein OS=Vitis...    37   0.50 
tr|A5AJF9|A5AJF9_VITVI Putative uncharacterized protein OS=Vitis...    37   0.50 
tr|A5BU25|A5BU25_VITVI Putative uncharacterized protein OS=Vitis...    37   0.65 
tr|A5BRS0|A5BRS0_VITVI Putative uncharacterized protein OS=Vitis...    37   0.65 
tr|A5BKA8|A5BKA8_VITVI Putative uncharacterized protein OS=Vitis...    37   0.65 
tr|A5BWP0|A5BWP0_VITVI Putative uncharacterized protein OS=Vitis...    36   0.85 
tr|A5BRQ1|A5BRQ1_VITVI Putative uncharacterized protein OS=Vitis...    36   0.85 
tr|A5AJ95|A5AJ95_VITVI Putative uncharacterized protein OS=Vitis...    36   0.85 
tr|A5C098|A5C098_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5BRX3|A5BRX3_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5BQ71|A5BQ71_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5BHY7|A5BHY7_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5BES4|A5BES4_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5B981|A5B981_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5AZQ5|A5AZQ5_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5AZ94|A5AZ94_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5AVF8|A5AVF8_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5ATH8|A5ATH8_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5ASW0|A5ASW0_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5AS74|A5AS74_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5ANM0|A5ANM0_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5AJK5|A5AJK5_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5ADS8|A5ADS8_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  

>tr|A5BEB6|A5BEB6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_025665 PE=4 SV=1
          Length = 685

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = -3

Query: 359 LETKFICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           +E +FI E + T  L+ +VVVPKK  K  VC +   +N A ++D+ PL
Sbjct: 45  IEARFIREVDYTDWLANVVVVPKKEGKWRVCVDYTNLNNACLKDSFPL 92


>tr|A5BQ24|A5BQ24_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_002410 PE=4 SV=1
          Length = 640

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 18/50 (36%), Positives = 29/50 (58%)
 Frame = -3

Query: 359 LETKFICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPLTH 210
           L  +F+   E    L+ +V VPKK NK+ VC + + +N    +D+ PL+H
Sbjct: 164 LNVRFLSVVEYPEWLANVVHVPKKDNKVRVCVDFQDINKVSPKDDFPLSH 213


>tr|A5AKW2|A5AKW2_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_028401 PE=4 SV=1
          Length = 742

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 20/50 (40%), Positives = 29/50 (58%)
 Frame = -3

Query: 359 LETKFICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPLTH 210
           L   FI   E    L+ +V+VPKK  K+ VC +L  +N A  +D+ PL+H
Sbjct: 45  LNVGFISVVEYLEWLANVVLVPKKDGKVRVCVDLRDLNKASPKDDFPLSH 94


>tr|A5C0C5|A5C0C5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_026904 PE=4 SV=1
          Length = 817

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 21/48 (43%), Positives = 28/48 (58%)
 Frame = -3

Query: 359 LETKFICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           LE +FI E E    L+ +VVVPKK +K  VC +   +N A  +D  PL
Sbjct: 45  LEVRFIREVEYPDWLANVVVVPKKESKWXVCIDYTNLNKACPKDXFPL 92


>tr|A5AZJ0|A5AZJ0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_028912 PE=4 SV=1
          Length = 890

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 22/48 (45%), Positives = 28/48 (58%)
 Frame = -3

Query: 359 LETKFICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           LET FI E E    L+ +VVVPKK  K  VC +   +N A  +D+ PL
Sbjct: 44  LETGFIREVEYPDWLANVVVVPKKEGKWRVCVDYTNLNNACPKDSFPL 91


>tr|A5BDR8|A5BDR8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034181 PE=4 SV=1
          Length = 921

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 22/48 (45%), Positives = 27/48 (56%)
 Frame = -3

Query: 359 LETKFICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           LE  FI E E    L+ +VVVPKK  K  VC N   +N A  +D+ PL
Sbjct: 45  LEAIFIKEVEYPDWLANVVVVPKKEGKWRVCVNYTNLNNACPKDSFPL 92


>tr|A5B6V1|A5B6V1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_042320 PE=4 SV=1
          Length = 829

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 22/48 (45%), Positives = 27/48 (56%)
 Frame = -3

Query: 359 LETKFICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           LE  FI E E    L+ +VVVPKK  K  VC +   +N A  +DN PL
Sbjct: 35  LEAGFIREMEYPDWLANVVVVPKKEGKWRVCVDYTNLNNACPKDNFPL 82


>tr|A5BFW3|A5BFW3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_007607 PE=4 SV=1
          Length = 975

 Score = 37.0 bits (84), Expect = 0.50
 Identities = 21/48 (43%), Positives = 27/48 (56%)
 Frame = -3

Query: 359 LETKFICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           LE  FI + E    L+ +VVVPKK  K  VC N   +N A  +D+ PL
Sbjct: 45  LEAGFIRDVEYPDWLANVVVVPKKEGKWWVCVNYTNLNNAYPKDSFPL 92


>tr|A5AJF9|A5AJF9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_038551 PE=4 SV=1
          Length = 1438

 Score = 37.0 bits (84), Expect = 0.50
 Identities = 20/46 (43%), Positives = 26/46 (56%)
 Frame = -3

Query: 347 FICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPLTH 210
           FI   E    L+ IV VPK   K+ VC N + +N A  +D+ PLTH
Sbjct: 674 FISMVEYLEWLANIVPVPKNDGKVRVCVNFKDLNKASPKDDFPLTH 719


>tr|A5BU25|A5BU25_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_041899 PE=4 SV=1
          Length = 852

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 21/49 (42%), Positives = 29/49 (59%)
 Frame = -3

Query: 359 LETKFICETELTV*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPLT 213
           LE+ FI E   +  L+ +VVVPKK  K  VC +   +N A  +D+ PLT
Sbjct: 45  LESGFIREVAYSDWLANVVVVPKKEGKWRVCVDYTNLNNACPKDSFPLT 93