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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915323
Clone id YMU001_000070_B10
Library
Length 306
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTACAAAGCTTCCCACTTCATCACAAGTACTTAGAATATTACAGTGCATATGCTGACAAA
AAAATTACATCCAATCCACGTAATGATCTTCACAATGGACAAGAAATGTACAAGGGCATC
TCACATCTCATTTAAGCTGCGACAGGCTGTGGTGCAGATGAAGGCACTCTATTCTGGGCA
GGAATTTCAGTGAACTCCGAGAGAATGGCTCTGAACTCATCCCCACTCATTGTCTCCTTC
TCTAACAAAACCTCCGCAATTTTGTCCATGGCAACTCGGTTGTTGCGAATGTGAGCCAAC
GCTGTC
■■Homology search results ■■ -
sp_hit_id O80860
Definition sp|O80860|FTSH2_ARATH Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana
Align length 62
Score (bit) 84.7
E-value 1.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915323|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_B10.
         (306 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80860|FTSH2_ARATH Cell division protease ftsH homolog 2, chl...    85   1e-16
sp|Q655S1|FTSH2_ORYSJ Cell division protease ftsH homolog 2, chl...    83   4e-16
sp|Q8W585|FTSH8_ARATH Cell division protease ftsH homolog 8, chl...    82   8e-16
sp|Q1PDW5|FTSH6_ARATH Cell division protease ftsH homolog 6, chl...    62   7e-10
sp|Q67WJ2|FTSH6_ORYSJ Cell division protease ftsH homolog 6, chl...    60   3e-09
sp|P51327|FTSH_PORPU Cell division protease ftsH homolog OS=Porp...    51   2e-06
sp|O78516|FTSH_GUITH Cell division protease ftsH homolog OS=Guil...    51   2e-06
sp|P49825|FTSH_ODOSI Cell division protease ftsH homolog OS=Odon...    49   6e-06
sp|Q1XDF9|FSTH_PORYE Cell division protease ftsH homolog OS=Porp...    48   1e-05
sp|Q55700|FTSH1_SYNY3 Cell division protease ftsH homolog 1 OS=S...    44   2e-04
sp|Q9TJ83|FTSH_CYAME Cell division protease ftsH homolog OS=Cyan...    43   6e-04
sp|P73437|FTSH3_SYNY3 Cell division protease ftsH homolog 3 OS=S...    33   0.44 
sp|P72991|FTSH4_SYNY3 Cell division protease ftsH homolog 4 OS=S...    32   0.99 
sp|A6USA0|RRMJ_METVS Ribosomal RNA large subunit methyltransfera...    30   3.8  
sp|Q8ES84|PCRB_OCEIH Putative glycerol-1-phosphate prenyltransfe...    29   8.4  
sp|Q9USY0|MU131_SCHPO Meiotically up-regulated gene 131 protein ...    29   8.4  
sp|Q61087|LAMB3_MOUSE Laminin subunit beta-3 OS=Mus musculus GN=...    29   8.4  
sp|O82150|FTSH_TOBAC Cell division protease ftsH homolog, chloro...    29   8.4  
sp|Q9BAE0|FTSH_MEDSA Cell division protease ftsH homolog, chloro...    29   8.4  
sp|Q9FH02|FTSH5_ARATH Cell division protease ftsH homolog 5, chl...    29   8.4  
sp|Q84WU8|FTSH3_ARATH Cell division protease ftsH homolog 3, mit...    29   8.4  
sp|Q5Z974|FTSH1_ORYSJ Cell division protease ftsH homolog 1, chl...    29   8.4  
sp|Q39102|FTSH1_ARATH Cell division protease ftsH homolog 1, chl...    29   8.4  

>sp|O80860|FTSH2_ARATH Cell division protease ftsH homolog 2,
           chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
          Length = 695

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 44/62 (70%), Positives = 49/62 (79%), Gaps = 7/62 (11%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPS-------SAPQP 144
           AL+HI+NNR AMDK+ EVLLEKET+ GDEFRAILSEFTEIP +NRVPS       SAP P
Sbjct: 633 ALSHIKNNREAMDKLVEVLLEKETIGGDEFRAILSEFTEIPPENRVPSSTTTTPASAPTP 692

Query: 143 VA 138
            A
Sbjct: 693 AA 694


>sp|Q655S1|FTSH2_ORYSJ Cell division protease ftsH homolog 2,
           chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH2
           PE=3 SV=1
          Length = 676

 Score = 83.2 bits (204), Expect = 4e-16
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSSAPQPVAA 135
           AL+ IR+NR AMDKI EVLLEKET+SGDEFRAILSEFTEIP +NRVP + P  + A
Sbjct: 621 ALSQIRSNREAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVENRVPPATPAALPA 676


>sp|Q8W585|FTSH8_ARATH Cell division protease ftsH homolog 8,
           chloroplastic OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
          Length = 685

 Score = 82.0 bits (201), Expect = 8e-16
 Identities = 41/49 (83%), Positives = 44/49 (89%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSS 156
           AL+ IRNNR AMDKI E+LLEKETMSGDEFRAILSEFTEIP +NRV SS
Sbjct: 626 ALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEFTEIPPENRVASS 674


>sp|Q1PDW5|FTSH6_ARATH Cell division protease ftsH homolog 6,
           chloroplastic OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1
          Length = 688

 Score = 62.4 bits (150), Expect = 7e-10
 Identities = 28/41 (68%), Positives = 36/41 (87%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIP 180
           A  H+RNNR A+DK+ +VLLEKET++GDEFRAILSE+T+ P
Sbjct: 631 AKKHVRNNREAIDKLVDVLLEKETLTGDEFRAILSEYTDQP 671


>sp|Q67WJ2|FTSH6_ORYSJ Cell division protease ftsH homolog 6,
           chloroplastic OS=Oryza sativa subsp. japonica GN=FTSH6
           PE=3 SV=1
          Length = 686

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 28/55 (50%), Positives = 40/55 (72%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSSAPQPVA 138
           A AH+R NR A+D++ +VL+EKET+ GDEFRAILSE  +I  + R  ++  Q +A
Sbjct: 630 AKAHVRRNRAAIDQLVDVLMEKETLGGDEFRAILSEHVDIGKERRETAARTQQLA 684


>sp|P51327|FTSH_PORPU Cell division protease ftsH homolog
           OS=Porphyra purpurea GN=ftsH PE=3 SV=1
          Length = 628

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 20/40 (50%), Positives = 33/40 (82%)
 Frame = -2

Query: 290 IRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQN 171
           +++NRV MD++ ++L+EKET+ G+EFR I+ E+T IP +N
Sbjct: 583 VKDNRVVMDRLVDLLIEKETIEGNEFRHIVKEYTAIPEKN 622


>sp|O78516|FTSH_GUITH Cell division protease ftsH homolog
           OS=Guillardia theta GN=ftsH PE=3 SV=1
          Length = 631

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 20/37 (54%), Positives = 31/37 (83%)
 Frame = -2

Query: 290 IRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIP 180
           I++NRV +DK+ ++L+EKET+ GDEFR I+ +FT +P
Sbjct: 583 IKDNRVVIDKLVDLLIEKETIDGDEFRQIVGDFTSLP 619


>sp|P49825|FTSH_ODOSI Cell division protease ftsH homolog
           OS=Odontella sinensis GN=ftsH PE=3 SV=1
          Length = 644

 Score = 49.3 bits (116), Expect = 6e-06
 Identities = 23/44 (52%), Positives = 32/44 (72%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQN 171
           A+  + +NRV +D I E LL+KETM GDEFR +LS +T +P +N
Sbjct: 593 AIEIVLDNRVVIDLIVEKLLDKETMDGDEFRELLSTYTILPNKN 636


>sp|Q1XDF9|FSTH_PORYE Cell division protease ftsH homolog
           OS=Porphyra yezoensis GN=ftsH PE=3 SV=1
          Length = 628

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 20/40 (50%), Positives = 32/40 (80%)
 Frame = -2

Query: 290 IRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQN 171
           I +NRV +D++ ++L+EKET+ G+EFR I+ E+T IP +N
Sbjct: 583 IIDNRVVIDRLVDLLIEKETIEGNEFRDIVKEYTAIPEKN 622


>sp|Q55700|FTSH1_SYNY3 Cell division protease ftsH homolog 1
           OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3
           SV=1
          Length = 627

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 15/42 (35%), Positives = 32/42 (76%)
 Frame = -2

Query: 290 IRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRV 165
           ++  R  +D++ ++L+EKET+ G+EFR I++E+ E+P + ++
Sbjct: 582 VQEQREVVDRLVDLLIEKETIDGEEFRQIVAEYAEVPVKEQL 623
tr_hit_id A7PJL7
Definition tr|A7PJL7|A7PJL7_VITVI Chromosome chr12 scaffold_18, whole genome shotgun sequence OS=Vitis vinifera
Align length 54
Score (bit) 91.3
E-value 2.0e-17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915323|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_B10.
         (306 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PJL7|A7PJL7_VITVI Chromosome chr12 scaffold_18, whole genom...    91   2e-17
tr|A5AER7|A5AER7_VITVI Putative uncharacterized protein OS=Vitis...    91   2e-17
tr|Q2PEV7|Q2PEV7_TRIPR Putative zinc dependent protease OS=Trifo...    85   2e-15
tr|A9STZ2|A9STZ2_PHYPA Predicted protein OS=Physcomitrella paten...    84   3e-15
tr|O99018|O99018_CAPAN Chloroplast protease OS=Capsicum annuum G...    84   5e-15
tr|Q9ZP50|Q9ZP50_TOBAC FtsH-like protein Pftf OS=Nicotiana tabac...    83   6e-15
tr|Q0DA88|Q0DA88_ORYSJ Os06g0669400 protein (Fragment) OS=Oryza ...    83   6e-15
tr|A6MZA7|A6MZA7_ORYSI Cell division protein ftsh (Fragment) OS=...    83   6e-15
tr|A2YG12|A2YG12_ORYSI Putative uncharacterized protein OS=Oryza...    83   6e-15
tr|Q9LMH8|Q9LMH8_ARATH T2D23.13 protein OS=Arabidopsis thaliana ...    82   1e-14
tr|B1P2H3|B1P2H3_MAIZE Filamentation temperature-sensitive H 2A ...    81   2e-14
tr|B6T8X2|B6T8X2_MAIZE FtsH6-Zea mays FtsH protease OS=Zea mays ...    81   3e-14
tr|B1P2H4|B1P2H4_MAIZE Filamentation temperature-sensitive H 2B ...    81   3e-14
tr|Q2PEX6|Q2PEX6_TRIPR Putative zinc dependent protease OS=Trifo...    80   7e-14
tr|A9T7H1|A9T7H1_PHYPA Predicted protein OS=Physcomitrella paten...    75   2e-12
tr|A9NQE3|A9NQE3_PICSI Putative uncharacterized protein OS=Picea...    75   2e-12
tr|Q4W5U8|Q4W5U8_SOLLC FtsH protease OS=Solanum lycopersicum GN=...    67   5e-10
tr|A0EXV4|A0EXV4_9FABA Putative FtsH protease (Fragment) OS=Ammo...    67   6e-10
tr|A7PMU5|A7PMU5_VITVI Chromosome chr14 scaffold_21, whole genom...    65   1e-09
tr|A5AIR5|A5AIR5_VITVI Putative uncharacterized protein OS=Vitis...    65   1e-09
tr|A8J6C7|A8J6C7_CHLRE Membrane AAA-metalloprotease OS=Chlamydom...    61   2e-08
tr|Q0DDE7|Q0DDE7_ORYSJ Os06g0229000 protein (Fragment) OS=Oryza ...    60   4e-08
tr|B8B492|B8B492_ORYSI Putative uncharacterized protein OS=Oryza...    60   4e-08
tr|A2BQM9|A2BQM9_PROMS FtsH ATP-dependent protease-like protein ...    57   5e-07
tr|A2Q1U2|A2Q1U2_MEDTR Peptidase M41 OS=Medicago truncatula GN=M...    57   6e-07
tr|Q10ZF7|Q10ZF7_TRIEI FtsH peptidase homologue, chloroplast. Me...    56   1e-06
tr|B6SVK3|B6SVK3_MAIZE FtsH6-Zea mays FtsH protease OS=Zea mays ...    56   1e-06
tr|B4F988|B4F988_MAIZE Putative uncharacterized protein OS=Zea m...    56   1e-06
tr|Q3AY02|Q3AY02_SYNS9 FtsH peptidase homologue, chloroplast. Me...    55   1e-06
tr|Q067G5|Q067G5_9SYNE Peptidase M41, FtsH OS=Synechococcus sp. ...    55   1e-06

>tr|A7PJL7|A7PJL7_VITVI Chromosome chr12 scaffold_18, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00018790001
           PE=4 SV=1
          Length = 695

 Score = 91.3 bits (225), Expect = 2e-17
 Identities = 44/54 (81%), Positives = 48/54 (88%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSSAPQPV 141
           AL HIRNNR A+DKI EVLLEKETM+GDEFRAILSEF EIPA+NRVP+S P PV
Sbjct: 640 ALTHIRNNREAIDKIVEVLLEKETMTGDEFRAILSEFVEIPAENRVPASVPSPV 693


>tr|A5AER7|A5AER7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_000418 PE=4 SV=1
          Length = 694

 Score = 91.3 bits (225), Expect = 2e-17
 Identities = 44/54 (81%), Positives = 48/54 (88%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSSAPQPV 141
           AL HIRNNR A+DKI EVLLEKETM+GDEFRAILSEF EIPA+NRVP+S P PV
Sbjct: 639 ALTHIRNNREAIDKIVEVLLEKETMTGDEFRAILSEFVEIPAENRVPASVPSPV 692


>tr|Q2PEV7|Q2PEV7_TRIPR Putative zinc dependent protease
           OS=Trifolium pratense PE=2 SV=1
          Length = 702

 Score = 84.7 bits (208), Expect = 2e-15
 Identities = 41/54 (75%), Positives = 46/54 (85%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSSAPQPV 141
           AL  IRNNR A+DKI EVLLEKET+SGDEFRA+LSEFTEIP +NRVP + P PV
Sbjct: 647 ALEQIRNNREAIDKIVEVLLEKETLSGDEFRALLSEFTEIPVENRVPPATPLPV 700


>tr|A9STZ2|A9STZ2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_135234 PE=4 SV=1
          Length = 635

 Score = 84.3 bits (207), Expect = 3e-15
 Identities = 42/55 (76%), Positives = 46/55 (83%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSSAPQPVA 138
           AL HIRNNR AMDKI EVLLEKET+SG EFRAILSE+TEIPA+NRV  +   PVA
Sbjct: 580 ALGHIRNNRTAMDKIVEVLLEKETLSGAEFRAILSEYTEIPAENRVSDNQAAPVA 634


>tr|O99018|O99018_CAPAN Chloroplast protease OS=Capsicum annuum
           GN=cacp PE=2 SV=1
          Length = 693

 Score = 83.6 bits (205), Expect = 5e-15
 Identities = 40/55 (72%), Positives = 48/55 (87%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSSAPQPVA 138
           AL+ IR+NR A+DKI EVLLE+ETM+GDEFRAILSEF EIPA+NRVP++ P P A
Sbjct: 638 ALSQIRSNREAIDKIVEVLLEQETMTGDEFRAILSEFVEIPAENRVPAAVPTPAA 692


>tr|Q9ZP50|Q9ZP50_TOBAC FtsH-like protein Pftf OS=Nicotiana tabacum
           GN=Pftf PE=2 SV=1
          Length = 693

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 41/53 (77%), Positives = 44/53 (83%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSSAPQP 144
           AL HIRNNR A+DKI EVLLEKETM+GDEFRAILSEF EIPA+NRV    P P
Sbjct: 638 ALTHIRNNREAIDKIVEVLLEKETMTGDEFRAILSEFVEIPAENRVAPVVPTP 690


>tr|Q0DA88|Q0DA88_ORYSJ Os06g0669400 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os06g0669400 PE=4 SV=1
          Length = 609

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSSAPQPVAA 135
           AL+ IR+NR AMDKI EVLLEKET+SGDEFRAILSEFTEIP +NRVP + P  + A
Sbjct: 554 ALSQIRSNREAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVENRVPPATPAALPA 609


>tr|A6MZA7|A6MZA7_ORYSI Cell division protein ftsh (Fragment)
           OS=Oryza sativa subsp. indica PE=2 SV=1
          Length = 177

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSSAPQPVAA 135
           AL+ IR+NR AMDKI EVLLEKET+SGDEFRAILSEFTEIP +NRVP + P  + A
Sbjct: 122 ALSQIRSNREAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVENRVPPATPAALPA 177


>tr|A2YG12|A2YG12_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_24055 PE=4 SV=1
          Length = 676

 Score = 83.2 bits (204), Expect = 6e-15
 Identities = 41/56 (73%), Positives = 47/56 (83%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSSAPQPVAA 135
           AL+ IR+NR AMDKI EVLLEKET+SGDEFRAILSEFTEIP +NRVP + P  + A
Sbjct: 621 ALSQIRSNREAMDKIVEVLLEKETLSGDEFRAILSEFTEIPVENRVPPATPAALPA 676


>tr|Q9LMH8|Q9LMH8_ARATH T2D23.13 protein OS=Arabidopsis thaliana
           GN=T2D23.13 PE=4 SV=1
          Length = 88

 Score = 82.0 bits (201), Expect = 1e-14
 Identities = 41/49 (83%), Positives = 44/49 (89%)
 Frame = -2

Query: 302 ALAHIRNNRVAMDKIAEVLLEKETMSGDEFRAILSEFTEIPAQNRVPSS 156
           AL+ IRNNR AMDKI E+LLEKETMSGDEFRAILSEFTEIP +NRV SS
Sbjct: 29  ALSQIRNNREAMDKIVEILLEKETMSGDEFRAILSEFTEIPPENRVASS 77