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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915329
Clone id YMU001_000070_C05
Library
Length 515
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GATATTACCTGCAGGTACTCGACCTAAGGCTTCTCACAAATGTACCAGCATCTATTTTAC
AACTATAATCCATCGTTCCTGTCAAGAATACCACACAATCTGAATTGACAATTGGGAACA
TTAGCATTTCACATTCTCACTTGCACCCCTATTTGGCTCTGTTTGCTGCTCTAAATGCTC
AAAAACAGCAACCACCTAAGCTTCTCACAAACCCAAAAATGGTACCAGTGATCGAATTTA
CAATTGTAATCAATTGTTTCTGTCAAGAATACCAGGCATAAACTTGCTCAAACCTACTGT
GTCAAAAAAGCAAACTCTACTATCAAGCTTTGGAGATGTGATGGAGCACGTGAAGCCTCT
CTGAGACACAATGACATATATAACCTTCCTGTCTGTAAGCGTAAGAGATGGATCGAATGC
CTTCTTTGTGTCATCTGCGACCTTTGCCATGTCATACCTCACTTTCTCCCCTTTCAACTG
CAACCAGAATTCGAACTTATTCCCTGTTGTTGATT
■■Homology search results ■■ -
sp_hit_id O28599
Definition sp|O28599|G1PDH_ARCFU Glycerol-1-phosphate dehydrogenase [NAD(P)+] OS=Archaeoglobus fulgidus
Align length 62
Score (bit) 30.0
E-value 6.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915329|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_C05.
         (515 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O28599|G1PDH_ARCFU Glycerol-1-phosphate dehydrogenase [NAD(P)...    30   6.7  
sp|Q6ZN19|ZN841_HUMAN Zinc finger protein 841 OS=Homo sapiens GN...    30   8.7  
sp|Q0P593|WDR69_BOVIN WD repeat-containing protein 69 OS=Bos tau...    30   8.7  

>sp|O28599|G1PDH_ARCFU Glycerol-1-phosphate dehydrogenase [NAD(P)+]
           OS=Archaeoglobus fulgidus GN=egsA PE=3 SV=1
          Length = 351

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +3

Query: 72  IVPVKNTTQSELTIGNISISHSHLHPYLALFAALNAQKQQPPKLLTNPKMVPVIEFTIVI 251
           ++ V     SEL    IS+  +  H  +A   A   +  +P  + TNP    + +  I+ 
Sbjct: 95  VLDVSKVVSSELNASMISVPTTASHDGIASPVASFKENGKPISISTNPPSAVIADLNIIK 154

Query: 252 NC 257
           NC
Sbjct: 155 NC 156


>sp|Q6ZN19|ZN841_HUMAN Zinc finger protein 841 OS=Homo sapiens
           GN=ZNF841 PE=2 SV=1
          Length = 808

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 14/107 (13%)
 Frame = +2

Query: 224 TSDRIYNCNQL-------FLSR-----IPGINLLKPTVSKKQTLLSSFGDVMEHVKPL*D 367
           T+++IY CNQ+       FL+       PG+   +  +S+K        D ++   P  D
Sbjct: 84  TAEKIYGCNQIERTVNNCFLASPLQRIFPGV---QTNISRKYG-----NDFLQLSLPTQD 135

Query: 368 TMTYITFLSVSVRDGSNAFFVSSA--TFAMSYLTFSPFNCNQNSNLF 502
             T+I        +   AF VSS+     M + T  P+ CN++   F
Sbjct: 136 EKTHIREKPYIGNECGKAFRVSSSLINHQMIHTTEKPYRCNESGKAF 182


>sp|Q0P593|WDR69_BOVIN WD repeat-containing protein 69 OS=Bos taurus
           GN=WDR69 PE=2 SV=1
          Length = 415

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 133 CEMLMFPIVNSDCVVFLTGTMDYSCKI 53
           C  +   + N DC + LTG+MD +CK+
Sbjct: 261 CAEISSAVFNWDCSLILTGSMDKTCKL 287
tr_hit_id B4P0P6
Definition tr|B4P0P6|B4P0P6_DROYA GE13615 OS=Drosophila yakuba
Align length 53
Score (bit) 37.0
E-value 0.58
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915329|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_C05.
         (515 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B4P0P6|B4P0P6_DROYA GE13615 OS=Drosophila yakuba GN=GE13615 P...    37   0.58 
tr|B6LKF1|B6LKF1_BRAFL Putative uncharacterized protein OS=Branc...    36   1.3  
tr|B3N5F3|B3N5F3_DROER GG10385 OS=Drosophila erecta GN=GG10385 P...    36   1.3  
tr|Q86LH1|Q86LH1_DROME Pickpocket 10 OS=Drosophila melanogaster ...    35   1.7  
tr|B4Q9B0|B4Q9B0_DROSI GD22255 OS=Drosophila simulans GN=GD22255...    35   1.7  
tr|B4HWQ3|B4HWQ3_DROSE GM11655 OS=Drosophila sechellia GN=GM1165...    35   1.7  
tr|B0CP86|B0CP86_LACBS Predicted protein OS=Laccaria bicolor (st...    35   2.2  
tr|Q16SP6|Q16SP6_AEDAE Putative uncharacterized protein OS=Aedes...    35   2.9  
tr|Q16JT8|Q16JT8_AEDAE Putative uncharacterized protein OS=Aedes...    35   2.9  
tr|Q5TP42|Q5TP42_ANOGA AGAP009789-PA (Fragment) OS=Anopheles gam...    34   4.9  
tr|B7QV33|B7QV33_9RHOB Peptide/opine/nickel uptake family ABC tr...    33   6.4  
tr|B4MUB0|B4MUB0_DROWI GK14883 OS=Drosophila willistoni GN=GK148...    33   6.4  
tr|B4LVB8|B4LVB8_DROVI GJ13850 OS=Drosophila virilis GN=GJ13850 ...    33   8.3  

>tr|B4P0P6|B4P0P6_DROYA GE13615 OS=Drosophila yakuba GN=GE13615 PE=4
           SV=1
          Length = 485

 Score = 37.0 bits (84), Expect = 0.58
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 313 NSTIKLWRCDGAREASLRHNDIYNLPVCKRKRWIECLLCVICDLCHVIPHFLP 471
           ++T+ + RC  A E++L H   Y   +C++    EC + +   +C  IPHF P
Sbjct: 302 DTTVAMRRCRFAHESNLTHFPFYTRNICQQ----ECRINLAYRICKCIPHFYP 350


>tr|B6LKF1|B6LKF1_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_119779 PE=4 SV=1
          Length = 451

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +1

Query: 352 EASLRHNDIYNLPVCKRKRWIECLLCVICDLCHVIPHFLPFQLQP 486
           E  LRH+D Y+LP C+    +EC    +   C   P+FLP    P
Sbjct: 251 ELQLRHHDTYSLPACQ----LECRSSHVEQACQCTPYFLPGTAPP 291


>tr|B3N5F3|B3N5F3_DROER GG10385 OS=Drosophila erecta GN=GG10385 PE=4
           SV=1
          Length = 485

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 16/53 (30%), Positives = 29/53 (54%)
 Frame = +1

Query: 313 NSTIKLWRCDGAREASLRHNDIYNLPVCKRKRWIECLLCVICDLCHVIPHFLP 471
           ++T+ + RC  + E++L H   Y   +C++    EC + +   +C  IPHF P
Sbjct: 302 DTTVAMRRCRFSHESNLTHFPFYTRYICQQ----ECRINLAYKICKCIPHFYP 350


>tr|Q86LH1|Q86LH1_DROME Pickpocket 10 OS=Drosophila melanogaster
           GN=ppk10 PE=2 SV=1
          Length = 485

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 313 NSTIKLWRCDGAREASLRHNDIYNLPVCKRKRWIECLLCVICDLCHVIPHFLP 471
           ++T+ + RC    E++L H   Y   +C++    EC + +   +C  IPHF P
Sbjct: 302 DTTVAMRRCRFPHESNLTHFPFYTRNICQQ----ECRINLAYKICKCIPHFYP 350


>tr|B4Q9B0|B4Q9B0_DROSI GD22255 OS=Drosophila simulans GN=GD22255
           PE=4 SV=1
          Length = 485

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 313 NSTIKLWRCDGAREASLRHNDIYNLPVCKRKRWIECLLCVICDLCHVIPHFLP 471
           ++T+ + RC    E++L H   Y   +C++    EC + +   +C  IPHF P
Sbjct: 302 DTTVAMRRCRFPHESNLTHFPFYTRNICQQ----ECRINLAYKICKCIPHFYP 350


>tr|B4HWQ3|B4HWQ3_DROSE GM11655 OS=Drosophila sechellia GN=GM11655
           PE=4 SV=1
          Length = 750

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 313 NSTIKLWRCDGAREASLRHNDIYNLPVCKRKRWIECLLCVICDLCHVIPHFLP 471
           ++T+ + RC    E++L H   Y   +C++    EC + +   +C  IPHF P
Sbjct: 567 DTTVAMRRCRFPHESNLTHFPFYTRNICQQ----ECRINLAYKICKCIPHFYP 615


>tr|B0CP86|B0CP86_LACBS Predicted protein OS=Laccaria bicolor
           (strain S238N-H82) GN=LACBIDRAFT_242668 PE=4 SV=1
          Length = 320

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 2/103 (1%)
 Frame = +2

Query: 41  CTSIYFTTIIHRSCQEYHTI*IDNWEH*HFTFSLAPLFGSVCCSKCSKTATT*ASHKPKN 220
           CT+I+    ++  CQE HTI ID         +L  +FG + C KC        + +P+ 
Sbjct: 138 CTAIFLDPSLNPKCQECHTIDIDQ--------ALKKVFGCLVCKKCQ-------NERPER 182

Query: 221 GTSDRIYNCNQLFLSRIPGI--NLLKPTVSKKQTLLSSFGDVM 343
            +      C Q +L   P +  + L P + K     S++ ++M
Sbjct: 183 YSLLTKTECKQDYLLTDPELRDHELLPHLLKANPHKSTYANMM 225


>tr|Q16SP6|Q16SP6_AEDAE Putative uncharacterized protein OS=Aedes
           aegypti GN=AAEL010534 PE=4 SV=1
          Length = 495

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +1

Query: 307 KANSTIKLWRCDGAREASLRHNDIYNLPVCKRKRWIECLLCVICDLCHVIPHFLPFQLQP 486
           + ++T+    C    E++L H +IY   +C +    EC L +  + C  IPHF P  ++P
Sbjct: 313 REHTTVSQRGCRFFPESNLTHFNIYTKGICLQ----ECRLKIAFENCGCIPHFYPNNVKP 368


>tr|Q16JT8|Q16JT8_AEDAE Putative uncharacterized protein OS=Aedes
           aegypti GN=AAEL013219 PE=4 SV=1
          Length = 419

 Score = 34.7 bits (78), Expect = 2.9
 Identities = 18/60 (30%), Positives = 31/60 (51%)
 Frame = +1

Query: 307 KANSTIKLWRCDGAREASLRHNDIYNLPVCKRKRWIECLLCVICDLCHVIPHFLPFQLQP 486
           + ++T+    C    E++L H +IY   +C +    EC L +  + C  IPHF P  ++P
Sbjct: 308 REHTTVSQRGCRFFPESNLTHFNIYTKGICLQ----ECRLKIAFENCGCIPHFYPNNVKP 363


>tr|Q5TP42|Q5TP42_ANOGA AGAP009789-PA (Fragment) OS=Anopheles
           gambiae GN=AGAP009789 PE=3 SV=3
          Length = 440

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = +1

Query: 307 KANSTIKLWRCDGAREASLRHNDIYNLPVCKRKRWIECLLCVICDLCHVIPHFLP 471
           K ++TI    C    E++L H  IY   +C +    EC + +   LC  IPHF P
Sbjct: 257 KEDTTISQRGCRFHYESNLTHYSIYTKGICLQ----ECRIQLAYKLCGCIPHFYP 307