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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915331
Clone id YMU001_000070_C07
Library
Length 407
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTGTTTTTTTTCTTGGACTTAATTAGTGAAAATAAACAGAATGAGACTGATTTTGG
TACGACTGGCTTCTTGCATATGAAGCAGACGCCCTCCGTATAAAAAGCTCCAGCTTTGGG
ACCTACTTGATCCCAGAAGGAAAGGAAGTTTAGCTCGTCGATACATGAAAGAGAAAAACG
ACATCAACCCCTACTTGGGGTTGCCTGACGGGAAGGAAGAACTGAACCATGCTTGTTAGC
ATGTCTCTATACTGATGATCCCATTCCAGAGCCATCTCCTGGGCCTTGAGAGGGATAAGT
GGCATTTGCCATGTCTTTTAAGTTTTGTATCTGTTCTAAAGTTTCCACGACATCAGTCAT
TGTAGGTCTCATCTTTGAGTCCCGATTGAGGCACCGGTGAGCAAGTT
■■Homology search results ■■ -
sp_hit_id Q54VC0
Definition sp|Q54VC0|Y9865_DICDI Probable serine/threonine-protein kinase DDB_G0280461 OS=Dictyostelium discoideum
Align length 41
Score (bit) 35.8
E-value 0.069
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915331|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_C07.
         (389 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q54VC0|Y9865_DICDI Probable serine/threonine-protein kinase D...    36   0.069
sp|Q8RY67|WAKLO_ARATH Wall-associated receptor kinase-like 14 OS...    35   0.090
sp|Q2LGB3|IRAK1_BOVIN Interleukin-1 receptor-associated kinase 1...    33   0.16 
sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic OS=Ara...    34   0.26 
sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic OS=Ara...    33   0.34 
sp|P43293|NAK_ARATH Probable serine/threonine-protein kinase NAK...    33   0.58 
sp|Q9S9M2|WAKLD_ARATH Wall-associated receptor kinase-like 4 OS=...    32   0.76 
sp|P55199|ELL_HUMAN RNA polymerase II elongation factor ELL OS=H...    32   0.76 
sp|P0C5E2|Y1839_ARATH Putative serine/threonine-protein kinase A...    32   0.99 
sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2 OS=...    32   0.99 
sp|Q9S9M5|WAKLA_ARATH Wall-associated receptor kinase-like 1 OS=...    32   0.99 
sp|Q9SA25|WAKLG_ARATH Wall-associated receptor kinase-like 8 OS=...    31   1.7  
sp|O48814|BIK1_ARATH Serine/threonine-protein kinase BIK1 OS=Ara...    31   1.7  
sp|P57729|RAB38_HUMAN Ras-related protein Rab-38 OS=Homo sapiens...    31   2.2  
sp|Q8GYF5|WAKLR_ARATH Wall-associated receptor kinase-like 21 OS...    30   2.9  
sp|Q9S9M3|WAKLC_ARATH Wall-associated receptor kinase-like 3 OS=...    30   2.9  
sp|Q8K4B2|IRAK3_MOUSE Interleukin-1 receptor-associated kinase 3...    30   2.9  
sp|Q8QZZ8|RAB38_MOUSE Ras-related protein Rab-38 OS=Mus musculus...    30   3.8  
sp|Q01056|TEGU_SHV21 Probable large tegument protein OS=Saimirii...    30   4.9  
sp|Q924U5|TESK2_RAT Dual specificity testis-specific protein kin...    29   6.4  
sp|Q96S53|TESK2_HUMAN Dual specificity testis-specific protein k...    29   6.4  
sp|Q9ESL4|MLTK_MOUSE Mitogen-activated protein kinase kinase kin...    29   6.4  
sp|Q9Y616|IRAK3_HUMAN Interleukin-1 receptor-associated kinase 3...    29   6.4  
sp|Q8VYA3|WAKLJ_ARATH Wall-associated receptor kinase-like 10 OS...    29   8.4  
sp|Q54QR3|RB32A_DICDI Ras-related protein Rab-32A OS=Dictyosteli...    29   8.4  
sp|Q9NYL2|MLTK_HUMAN Mitogen-activated protein kinase kinase kin...    29   8.4  

>sp|Q54VC0|Y9865_DICDI Probable serine/threonine-protein kinase
           DDB_G0280461 OS=Dictyostelium discoideum GN=DDB_G0280461
           PE=3 SV=1
          Length = 418

 Score = 35.8 bits (81), Expect = 0.069
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQ--IQNLKDMANATYPS 271
           L+ +C N D   RP+ TD+V+TL+Q  I+ +K+  +  YPS
Sbjct: 244 LSMKCCNYDPNDRPSFTDIVQTLDQLAIKLVKETPDGPYPS 284


>sp|Q8RY67|WAKLO_ARATH Wall-associated receptor kinase-like 14
           OS=Arabidopsis thaliana GN=WAKL14 PE=2 SV=2
          Length = 708

 Score = 35.4 bits (80), Expect = 0.090
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQ 307
           LA RCL   S MRPTMT+V + LEQI+
Sbjct: 598 LAFRCLAFHSDMRPTMTEVADELEQIR 624


>sp|Q2LGB3|IRAK1_BOVIN Interleukin-1 receptor-associated kinase 1
           OS=Bos taurus GN=IRAK1 PE=2 SV=2
          Length = 718

 Score = 32.7 bits (73), Expect(2) = 0.16
 Identities = 15/27 (55%), Positives = 20/27 (74%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQ 307
           LA  CL+R +K RP MT V +TLE++Q
Sbjct: 496 LACCCLHRRAKRRPPMTQVYQTLEELQ 522



 Score = 20.8 bits (42), Expect(2) = 0.16
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -1

Query: 293 WQMPLIPLKAQEMALEW 243
           WQ    PL AQ  A +W
Sbjct: 561 WQPLAAPLGAQAQATDW 577


>sp|P46573|APK1B_ARATH Protein kinase APK1B, chloroplastic
           OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2
          Length = 412

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKD 295
           LA RCL  + K+RP M +VV  LE IQ L +
Sbjct: 329 LALRCLTFEIKLRPNMNEVVSHLEHIQTLNE 359


>sp|Q06548|APK1A_ARATH Protein kinase APK1A, chloroplastic
           OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1
          Length = 410

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNL 301
           L+ RCL  + K+RP M++VV  LE IQ+L
Sbjct: 328 LSLRCLTTEIKLRPNMSEVVSHLEHIQSL 356


>sp|P43293|NAK_ARATH Probable serine/threonine-protein kinase NAK
           OS=Arabidopsis thaliana GN=NAK PE=2 SV=2
          Length = 389

 Score = 32.7 bits (73), Expect = 0.58
 Identities = 13/31 (41%), Positives = 23/31 (74%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKD 295
           LA  C++ D+K RPTM ++V+T+E++   K+
Sbjct: 328 LALDCISIDAKSRPTMNEIVKTMEELHIQKE 358


>sp|Q9S9M2|WAKLD_ARATH Wall-associated receptor kinase-like 4
           OS=Arabidopsis thaliana GN=WAKL4 PE=2 SV=2
          Length = 761

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQN 304
           LA RCLNR  K RP M +V   LE+I++
Sbjct: 672 LAKRCLNRKGKKRPNMREVSVELERIRS 699


>sp|P55199|ELL_HUMAN RNA polymerase II elongation factor ELL OS=Homo
           sapiens GN=ELL PE=1 SV=1
          Length = 621

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = +3

Query: 66  SRRPPYKKLQLWDLLDP--RRKGSLARRYMKEKNDINPYLGLPDGKEEL 206
           S  PP K+LQ  D +DP   +K  ++    + +  +N  LG+P+G+E L
Sbjct: 317 SASPPQKRLQPPDFIDPLANKKPRISHFTQRAQPAVNGKLGVPNGREAL 365


>sp|P0C5E2|Y1839_ARATH Putative serine/threonine-protein kinase
           At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=1 SV=1
          Length = 605

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 14/28 (50%), Positives = 19/28 (67%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQN 304
           LA +CL  D  +RP M+ V +TL +IQN
Sbjct: 545 LAFQCLQSDKDLRPCMSHVQDTLTRIQN 572


>sp|Q7X8C5|WAKLB_ARATH Wall-associated receptor kinase-like 2
           OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1
          Length = 748

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 15/28 (53%), Positives = 18/28 (64%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQN 304
           LA RCLNR  K RP M +V   LE I++
Sbjct: 664 LARRCLNRKGKKRPNMREVSIELEMIRS 691
tr_hit_id Q9SRH7
Definition tr|Q9SRH7|Q9SRH7_ARATH Putative uncharacterized protein T22N4.7 (At3g01300) (Putative uncharacterized protein T4P13.2) OS=Arabidopsis thaliana
Align length 58
Score (bit) 54.3
E-value 3.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915331|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_C07.
         (389 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9SRH7|Q9SRH7_ARATH Putative uncharacterized protein T22N4.7 ...    54   3e-06
tr|Q93ZF1|Q93ZF1_ARATH AT3g01300/T22N4_7 OS=Arabidopsis thaliana...    54   3e-06
tr|Q8LBS0|Q8LBS0_ARATH Putative uncharacterized protein OS=Arabi...    54   3e-06
tr|Q9LFP7|Q9LFP7_ARATH Serine/threonine specific protein kinase-...    53   9e-06
tr|B6TR03|B6TR03_MAIZE Protein kinase APK1A OS=Zea mays PE=2 SV=1      52   1e-05
tr|Q5XWQ1|Q5XWQ1_SOLTU Serine/threonine protein kinase-like OS=S...    51   3e-05
tr|B8LKU3|B8LKU3_PICSI Putative uncharacterized protein OS=Picea...    50   6e-05
tr|B7ZXE4|B7ZXE4_MAIZE Putative uncharacterized protein OS=Zea m...    49   1e-04
tr|Q6K551|Q6K551_ORYSJ Putative serine/threonine protein kinase ...    49   2e-04
tr|Q0J2C1|Q0J2C1_ORYSJ Os09g0361100 protein (Fragment) OS=Oryza ...    49   2e-04
tr|B8BES5|B8BES5_ORYSI Putative uncharacterized protein OS=Oryza...    49   2e-04
tr|A3BY11|A3BY11_ORYSJ Putative uncharacterized protein OS=Oryza...    49   2e-04
tr|A9NUW8|A9NUW8_PICSI Putative uncharacterized protein OS=Picea...    48   2e-04
tr|A7Q2R8|A7Q2R8_VITVI Chromosome chr1 scaffold_46, whole genome...    48   2e-04
tr|A5ARK5|A5ARK5_VITVI Putative uncharacterized protein OS=Vitis...    48   2e-04
tr|Q8S1E8|Q8S1E8_ORYSJ cDNA clone:J033117E11, full insert sequen...    47   4e-04
tr|B8LKY1|B8LKY1_PICSI Putative uncharacterized protein OS=Picea...    47   4e-04
tr|A2ZUW4|A2ZUW4_ORYSJ Putative uncharacterized protein OS=Oryza...    47   4e-04
tr|A2WRZ2|A2WRZ2_ORYSI Putative uncharacterized protein OS=Oryza...    47   4e-04
tr|A9TD12|A9TD12_PHYPA Predicted protein OS=Physcomitrella paten...    47   5e-04
tr|A9PB76|A9PB76_POPTR Putative uncharacterized protein OS=Popul...    46   8e-04
tr|A7Q9T6|A7Q9T6_VITVI Chromosome chr8 scaffold_68, whole genome...    46   8e-04
tr|Q9LJI7|Q9LJI7_ARATH Protein kinase OS=Arabidopsis thaliana PE...    46   0.001
tr|B3LFC3|B3LFC3_ARATH At3g28690 OS=Arabidopsis thaliana PE=2 SV=1     46   0.001
tr|A9RVK4|A9RVK4_PHYPA Predicted protein OS=Physcomitrella paten...    46   0.001
tr|Q5VRF2|Q5VRF2_ORYSJ Os06g0168800 protein OS=Oryza sativa subs...    45   0.001
tr|B8B3A0|B8B3A0_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.001
tr|A3B8S9|A3B8S9_ORYSJ Putative uncharacterized protein OS=Oryza...    45   0.001
tr|B8LRT7|B8LRT7_PICSI Putative uncharacterized protein OS=Picea...    45   0.002
tr|A7PMS1|A7PMS1_VITVI Chromosome chr14 scaffold_21, whole genom...    45   0.002

>tr|Q9SRH7|Q9SRH7_ARATH Putative uncharacterized protein T22N4.7
           (At3g01300) (Putative uncharacterized protein T4P13.2)
           OS=Arabidopsis thaliana GN=T4P13.2 PE=2 SV=1
          Length = 490

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 9/58 (15%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKDMANATYPSQ---------GPGDGSGMG 241
           LA +CL+RDSK+RP M++VVE L+ + +LKDMA+A+Y  Q         G G GSG G
Sbjct: 394 LAAQCLSRDSKIRPKMSEVVEVLKPLPHLKDMASASYYFQTMQAERLKAGSGSGSGRG 451


>tr|Q93ZF1|Q93ZF1_ARATH AT3g01300/T22N4_7 OS=Arabidopsis thaliana
           PE=2 SV=1
          Length = 184

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 9/58 (15%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKDMANATYPSQ---------GPGDGSGMG 241
           LA +CL+RDSK+RP M++VVE L+ + +LKDMA+A+Y  Q         G G GSG G
Sbjct: 88  LAAQCLSRDSKIRPKMSEVVEVLKPLPHLKDMASASYYFQTMQAERLKAGSGSGSGRG 145


>tr|Q8LBS0|Q8LBS0_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 482

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 9/58 (15%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKDMANATYPSQ---------GPGDGSGMG 241
           LA +CL+RDSK+RP M++VVE L+ + +LKDMA+A+Y  Q         G G GSG G
Sbjct: 386 LAAQCLSRDSKIRPKMSEVVEVLKPLPHLKDMASASYYFQTMQAERLKAGSGSGSGRG 443


>tr|Q9LFP7|Q9LFP7_ARATH Serine/threonine specific protein
           kinase-like OS=Arabidopsis thaliana GN=F2G14_200 PE=2
           SV=1
          Length = 493

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 35/87 (40%), Positives = 48/87 (55%), Gaps = 16/87 (18%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKDMANATYPSQ---------GPGDGSGMGSS 235
           LA +CL+RD K+RP M+DVVE L+ + +LKDMA+++Y  Q         G G   G GS 
Sbjct: 400 LAAQCLSRDPKIRPKMSDVVEALKPLPHLKDMASSSYYFQTMQAERLKNGSGRSQGFGSR 459

Query: 234 V*RH-------ANKHGSVLPSRQATPS 175
             +H       ++ HGS  P R   PS
Sbjct: 460 NGQHQPVFRTLSSPHGS-SPYRHQIPS 485


>tr|B6TR03|B6TR03_MAIZE Protein kinase APK1A OS=Zea mays PE=2 SV=1
          Length = 481

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 23/37 (62%), Positives = 30/37 (81%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKDMANATY 277
           LAH CL+RD K RP M+ VVE L+ +QNLKDMA+++Y
Sbjct: 386 LAHACLSRDPKARPLMSQVVEVLKPLQNLKDMASSSY 422


>tr|Q5XWQ1|Q5XWQ1_SOLTU Serine/threonine protein kinase-like
           OS=Solanum tuberosum PE=4 SV=1
          Length = 603

 Score = 51.2 bits (121), Expect = 3e-05
 Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKDMANATYPSQG-PGDGSGMGSSV*RHANKH 211
           LA RCL+RD K RP M+DVVE L+ + NLKDMA+++Y  Q    D  G   S        
Sbjct: 504 LAARCLSRDPKARPMMSDVVEALKPLPNLKDMASSSYYFQTMQADRVGSSPSTKNGVRTQ 563

Query: 210 GSVLPSRQATP 178
           GS   + Q  P
Sbjct: 564 GSFSRNGQQHP 574


>tr|B8LKU3|B8LKU3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 440

 Score = 50.1 bits (118), Expect = 6e-05
 Identities = 23/36 (63%), Positives = 28/36 (77%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKDMANAT 280
           LA+ CLN++ K RP M DVVETLE +QN KDM NA+
Sbjct: 357 LAYHCLNQNPKARPLMGDVVETLEPLQNRKDMVNAS 392


>tr|B7ZXE4|B7ZXE4_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 506

 Score = 48.9 bits (115), Expect = 1e-04
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKDMANATY 277
           LA  CL+RD K RP M+ VVE L  +QNL+DMA+A+Y
Sbjct: 407 LARACLSRDPKARPLMSQVVEVLRPLQNLRDMASASY 443


>tr|Q6K551|Q6K551_ORYSJ Putative serine/threonine protein kinase
           OS=Oryza sativa subsp. japonica GN=P0711F01.53 PE=4 SV=1
          Length = 326

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKDMANATY 277
           LA  CLNRD K RP M+ VVE L+ + NLKDMA+++Y
Sbjct: 232 LARACLNRDPKARPLMSQVVEVLKPLLNLKDMASSSY 268


>tr|Q0J2C1|Q0J2C1_ORYSJ Os09g0361100 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os09g0361100 PE=4 SV=1
          Length = 384

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = -3

Query: 387 LAHRCLNRDSKMRPTMTDVVETLEQIQNLKDMANATY 277
           LA  CLNRD K RP M+ VVE L+ + NLKDMA+++Y
Sbjct: 290 LARACLNRDPKARPLMSQVVEVLKPLLNLKDMASSSY 326