BP915342
Clone id YMU001_000070_D07
Library
Length 453
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGCAGATGTACATTATTTATGGGATGGTTCTGTGAAGGCCCCTCCATGGTGCCATAATTT
GGTGTCCTCTTGTTAGCTTAAGTGCTGATTCTGAATCTCGCAGATGACTGTTGCCTCCCA
AACGAGCAGCCCCGACCTGCATCTCCCTACTAACTGAGTGGTTTCCACCATGAGGTGCTT
GCCAATTGTTTGGCCAGTCAAGACTAGAGCCTCCCATCATGCCAGAAGACCTCATGCGTG
CTGCAACGTGTAAAAATTCTCCTGTAAGCTCATCCAGTGAGTCTCGCCTAGTCAGCTTTT
CGAATCCACTTGTCACCCAGTAATGGCCTCTCATCACTAGGAAGACTTGCTCGCCGCAAA
TCATCCTGCCTTGAACCCCTACCTTGTAAATCTAAGCTCTCTCTAAAGCCCATTTGATGC
ACCACATTGCCACCCAAGATCATTACAGCTTGG
■■Homology search results ■■ -
sp_hit_id A1SDP0
Definition sp|A1SDP0|ARAA_NOCSJ L-arabinose isomerase OS=Nocardioides sp. (strain BAA-499 / JS614)
Align length 68
Score (bit) 30.8
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915342|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_D07.
(453 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A1SDP0|ARAA_NOCSJ L-arabinose isomerase OS=Nocardioides sp. (... 31 2.8
sp|Q6R6L8|FSHR_MESAU Follicle-stimulating hormone receptor OS=Me... 30 4.9

>sp|A1SDP0|ARAA_NOCSJ L-arabinose isomerase OS=Nocardioides sp.
(strain BAA-499 / JS614) GN=araA PE=3 SV=1
Length = 502

Score = 30.8 bits (68), Expect = 2.8
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = -3

Query: 277 LDELTGEFLHVAAXXXXXXXXXXXSLDWPNNWQAPHGGNHSVSREMQVGAARLGGNSHLR 98
LD L LH+ +D+ N QA HG S + ++G AR H+
Sbjct: 94 LDALRKPLLHLHTQANQALPWAEIDMDFMNLNQAAHGDREFASVQTRMGVARKTVTGHVE 153

Query: 97 DSESALKL 74
D E A ++
Sbjct: 154 DPEVARRI 161


>sp|Q6R6L8|FSHR_MESAU Follicle-stimulating hormone receptor
OS=Mesocricetus auratus GN=FSHR PE=2 SV=1
Length = 694

Score = 30.0 bits (66), Expect = 4.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1

Query: 274 PVSLA*SAFRIHLSPSNGLSSLGRLARRKSSCLEPLPCKSK 396
PV L S ++H PS+GL +L +L R + L+ LP K
Sbjct: 220 PVILDISRTKVHSLPSHGLENLKKLRARSTYSLKKLPSLDK 260


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915342|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_D07.
(453 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******