BP915343
Clone id YMU001_000070_D09
Library
Length 472
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GCGGAGGCTTCGGGTTTATGCAAGGCAAAGAGCAATGCGGAGGCTGTCGTAAACATCACA
TACTGTGATGTAGGAAGCACATTGAAGCTGCCAGTATCCTTGAAATGTCTGTTTCTTTCT
TTGCATTCTGAATGGGGTGTGGCAACAGATACATGGATGGAACGATGGGACATTTTGCAT
TAATGATGTGGGCACCATGGCTAATATTTATGGAGCCCACCTCGAAAAGATTCACTATCC
TGATATCCTTGAAATAAAAGTACGAAGAGGTTTGGAAGCATTAATGAACAAGGAATGGTT
ATGTGGAGGAAGCATTCAGCTTCAATTTTCTGGAGGATTGAGATACTCAGTATGTAAAGG
CTTGAGCAACTCAATTTTTTAAAAGATTTGTCAAGAAATCTGTTGATAGTGGTGGAGAAT
TTTCTAATGCCGCCTAACAACCCTGTATTTACATAGGTGGACTCTCCCTATC
■■Homology search results ■■ -
sp_hit_id Q4IB63
Definition sp|Q4IB63|GPI10_GIBZE GPI mannosyltransferase 3 OS=Gibberella zeae
Align length 31
Score (bit) 31.6
E-value 1.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915343|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_D09.
(472 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q4IB63|GPI10_GIBZE GPI mannosyltransferase 3 OS=Gibberella ze... 32 1.8
sp|Q64611|CSAD_RAT Cysteine sulfinic acid decarboxylase OS=Rattu... 30 7.1
sp|Q9DBE0|CSAD_MOUSE Cysteine sulfinic acid decarboxylase OS=Mus... 30 7.1
sp|B0TLA6|RECF_SHEHH DNA replication and repair protein recF OS=... 29 9.1
sp|A6QM00|GADL1_BOVIN Glutamate decarboxylase-like protein 1 OS=... 29 9.3

>sp|Q4IB63|GPI10_GIBZE GPI mannosyltransferase 3 OS=Gibberella zeae
GN=GPI10 PE=3 SV=1
Length = 613

Score = 31.6 bits (70), Expect = 1.8
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -3

Query: 107 HFKDTGSFNVLPTSQYVMFTTASALLFALHK 15
H T FNVL T Y +FTT AL HK
Sbjct: 335 HATSTQQFNVLKTLAYTVFTTVGALSLITHK 365


>sp|Q64611|CSAD_RAT Cysteine sulfinic acid decarboxylase OS=Rattus
norvegicus GN=Csad PE=1 SV=1
Length = 493

Score = 29.6 bits (65), Expect = 7.1
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2

Query: 155 GWN--DGTFCINDVGTMANIYGAHLEKI-HYPDILEIKVRRGLEALMNKEWLCGGSIQLQ 325
GWN DG FC G+++N+Y +L + YPD + RGL AL + L
Sbjct: 140 GWNTGDGVFCPG--GSISNMYAINLARFQRYPDCKQ----RGLRAL--------PPLALF 185

Query: 326 FSGGLRYSVCKG 361
S YS+ KG
Sbjct: 186 TSKECHYSITKG 197


>sp|Q9DBE0|CSAD_MOUSE Cysteine sulfinic acid decarboxylase OS=Mus
musculus GN=Csad PE=2 SV=1
Length = 493

Score = 29.6 bits (65), Expect = 7.1
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Frame = +2

Query: 155 GWN--DGTFCINDVGTMANIYGAHLEKI-HYPDILEIKVRRGLEALMNKEWLCGGSIQLQ 325
GWN DG FC G+++N+Y +L + YPD + RGL AL + L
Sbjct: 140 GWNSGDGVFCPG--GSISNMYAMNLARFQRYPDCKQ----RGLRAL--------PPLALF 185

Query: 326 FSGGLRYSVCKG 361
S YS+ KG
Sbjct: 186 TSKECHYSITKG 197


>sp|B0TLA6|RECF_SHEHH DNA replication and repair protein recF
OS=Shewanella halifaxensis (strain HAW-EB4) GN=recF PE=3
SV=1
Length = 365

Score = 29.3 bits (64), Expect = 9.1
Identities = 20/73 (27%), Positives = 33/73 (45%)
Frame = -3

Query: 299 TIPCSLMLPNLFVLLFQGYQDSESFRGGLHKY*PWCPHH*CKMSHRSIHVSVATPHSECK 120
T+P ++ P F LLF+G + F W H S +S H++ A K
Sbjct: 111 TLPIQVITPESFSLLFEGPKSRRQFI-------DWGAFH----SDKSFHLAWANVRRILK 159

Query: 119 ERNRHFKDTGSFN 81
+RN+ K+ S++
Sbjct: 160 QRNQLLKNQVSYS 172


>sp|A6QM00|GADL1_BOVIN Glutamate decarboxylase-like protein 1 OS=Bos
taurus GN=GADL1 PE=2 SV=2
Length = 521

Score = 29.3 bits (64), Expect = 9.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +2

Query: 155 GWNDGTFCINDVGTMANIYGAHLEKIHY-PDILEIKVRRGLEAL 283
GW +G N G+++N+Y +L + Y PDI E +GL L
Sbjct: 168 GWKEGDGIFNPGGSVSNMYAMNLARYKYCPDIKE----KGLSGL 207


tr_hit_id B5DLD0
Definition tr|B5DLD0|B5DLD0_DROPS GA22655 OS=Drosophila pseudoobscura pseudoobscura
Align length 43
Score (bit) 34.7
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915343|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_D09.
(472 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5DLD0|B5DLD0_DROPS GA22655 OS=Drosophila pseudoobscura pseud... 35 2.4
tr|Q5XLU9|Q5XLU9_ONCMY Lysine ketoglutarate reductase/saccharopi... 33 7.1

>tr|B5DLD0|B5DLD0_DROPS GA22655 OS=Drosophila pseudoobscura
pseudoobscura GN=GA22655 PE=4 SV=1
Length = 1079

Score = 34.7 bits (78), Expect = 2.4
Identities = 14/43 (32%), Positives = 29/43 (67%)
Frame = +1

Query: 289 QGMVMWRKHSASIFWRIEILSM*RLEQLNFLKDLSRNLLIVVE 417
Q + +W++HS S + R+ +LS+ +E +N ++ NL++VV+
Sbjct: 578 QAVCLWKRHSRSFYERVRVLSVPPIENVNLVQS---NLMVVVQ 617


>tr|Q5XLU9|Q5XLU9_ONCMY Lysine ketoglutarate reductase/saccharopine
dehydrogenase OS=Oncorhynchus mykiss PE=2 SV=1
Length = 930

Score = 33.1 bits (74), Expect = 7.1
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -1

Query: 250 KDIRIVNLFEVGSINISHGAHIINAKCPIVPSMYLLPHPIQNAKKETDISRILAASMCFL 71
K I V G+ N+S GA I + P+ Y+ PH +++ + D+SR+ A +
Sbjct: 215 KSIGPVTFVFTGTGNVSKGAQDIINELPVE---YVEPHELKDVSQTGDMSRVYATVLSRH 271

Query: 70 HHSM 59
HH M
Sbjct: 272 HHLM 275