BP915345 |
Clone id |
YMU001_000070_D11 |
Library |
YMU01 |
Length |
528 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000070_D11. |
Accession |
BP915345 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACTCCCAGTCATTGTCTATTCCTATGGGCAGGTGGCTCAGAGCTTACTAGAATTTTGGA AGATGATAACAAGATTATGCCAGATAAATTTATTCCTTATGAGGTTCGGAAAGAATTGGC GGAGATCATTCCTGGACTGCGTCCCTGGGAGGTGTTTGAAATTGAGCAGATCATGGAGTC GGTTACCTACGGGGAGAAATGGTATCGTGAACCGCTCAGCGAGTTTACAATGAGGGCCGA TTATGATGAGGCTTGGTTCAACGATTATAAGGATAAGTGGGAGGGTCTCTTTGACGACCT TGATGAGATTTTTGCAAAAGTTGACAAGAAAGAATTTATCAAAAAATTGAAAGCAGCTGA AAGGAGAAAGATGTTGAAGGGCTGAGCTAATTGTAAGTTCCATTTTTATTTCTGTTATGG AGTAGAAGTTGGAGCACGTCCAAAACTCTCCCAATTTGCTTTTCTGTGCAGTGGGCACGC TTCGAAGTTCTTTTATGTTTTACGCCTCTGGAAGTTGGAATGTATCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P61760 |
Definition |
sp|P61760|SYL_NANEQ Leucyl-tRNA synthetase OS=Nanoarchaeum equitans |
Align length |
122 |
Score (bit) |
33.9 |
E-value |
0.49 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SS19 |
Definition |
tr|A9SS19|A9SS19_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
91 |
Score (bit) |
127.0 |
E-value |
3.0e-28 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915345|Adiantum capillus-veneris mRNA, clone: YMU001_000070_D11. (528 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SS19|A9SS19_PHYPA Predicted protein OS=Physcomitrella paten... 127 3e-28 tr|A7QKU7|A7QKU7_VITVI Chromosome chr8 scaffold_115, whole genom... 119 7e-26 tr|A5C555|A5C555_VITVI Putative uncharacterized protein OS=Vitis... 119 7e-26 tr|Q7Y1W1|Q7Y1W1_ARATH Putative uncharacterized protein At5g0159... 113 7e-24 tr|Q7Y1Z4|Q7Y1Z4_ARATH Putative uncharacterized protein At5g0159... 111 2e-23 tr|Q9M016|Q9M016_ARATH Putative uncharacterized protein F7A7_110... 95 2e-18 tr|Q1ZZ58|Q1ZZ58_9HEPC Genome polyprotein OS=Hepatitis C virus s... 35 1.8 tr|A5KC97|A5KC97_PLAVI Variable surface protein Vir12-related OS... 35 1.8 tr|Q8WRS6|Q8WRS6_PLAFA Normocyte-binding protein 1 OS=Plasmodium... 35 3.0 tr|Q4QPV3|Q4QPV3_DROME CG15705 OS=Drosophila melanogaster GN=CG1... 35 3.0 tr|Q3IRT9|Q3IRT9_NATPD Putative uncharacterized protein OS=Natro... 35 3.0 tr|B8X2Y9|B8X2Y9_9HEPC Polyprotein OS=Hepatitis C virus PE=4 SV=1 34 4.0 tr|A3EZH8|A3EZH8_9HEPC NS3 (Fragment) OS=Hepatitis C virus GN=NS... 34 4.0 tr|A2CJ00|A2CJ00_9HEPC Genome polyprotein OS=Hepatitis C virus s... 34 4.0 tr|A1EH66|A1EH66_9HEPC Polyprotein (Fragment) OS=Hepatitis C vir... 34 4.0 tr|Q0ZRR7|Q0ZRR7_NEMVE UNC4-paired class homeobox protein (Fragm... 34 4.0 tr|Q0N4B5|Q0N4B5_NEMVE UNC4-like (Fragment) OS=Nematostella vect... 34 4.0 tr|A9G5E6|A9G5E6_SORC5 Transcriptional regulator, ArsR family OS... 34 5.2 tr|A7SEC5|A7SEC5_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 5.2 tr|B0CTP5|B0CTP5_LACBS Predicted protein OS=Laccaria bicolor (st... 34 5.2 tr|Q9QNC0|Q9QNC0_9HEPC Genome polyprotein OS=Hepatitis C virus P... 33 6.7 tr|Q9J3G4|Q9J3G4_9HEPC Genome polyprotein OS=Hepatitis C virus s... 33 6.7 tr|B8X2Z1|B8X2Z1_9HEPC Polyprotein OS=Hepatitis C virus PE=4 SV=1 33 6.7 tr|B8X2Z0|B8X2Z0_9HEPC Polyprotein OS=Hepatitis C virus PE=4 SV=1 33 6.7 tr|B3TZ37|B3TZ37_9HEPC Polyprotein OS=Hepatitis C virus PE=4 SV=1 33 6.7 tr|B2Y2N5|B2Y2N5_9HEPC Polyprotein (Fragment) OS=Hepatitis C vir... 33 6.7 tr|B2Y2L6|B2Y2L6_9HEPC Polyprotein (Fragment) OS=Hepatitis C vir... 33 6.7 tr|A7XB08|A7XB08_9HEPC Genome polyprotein OS=Hepatitis C virus P... 33 6.7 tr|B1MBL0|B1MBL0_MYCA9 Probable fatty acid desaturase OS=Mycobac... 33 6.7 tr|A8ZXF8|A8ZXF8_DESOH Integrase family protein OS=Desulfococcus... 33 6.7
>tr|A9SS19|A9SS19_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_134320 PE=4 SV=1 Length = 436
Score = 127 bits (320), Expect = 3e-28 Identities = 58/91 (63%), Positives = 69/91 (75%), Gaps = 1/91 (1%) Frame = +2
Query: 2 TPSHCLFLWAGGSELTRILEDDNKI-MPDKFIPYEVRKELAEIIPGLRPWEVFEIEQIME 178 TP+H +FLWAGGSELT +LE K MP KFI YE RKELA+ IPGLRPWEV E+EQ+M+ Sbjct: 331 TPAHAMFLWAGGSELTDLLEQGTKQNMPHKFISYEARKELAKQIPGLRPWEVLEVEQVMD 390
Query: 179 SVTYGEKWYREPLSEFTMRADYDEAWFNDYK 271 VTY +WYRE L EFT RADY+ WF ++ Sbjct: 391 LVTYSREWYREDLGEFTTRADYEREWFESFQ 421
>tr|A7QKU7|A7QKU7_VITVI Chromosome chr8 scaffold_115, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001287001 PE=4 SV=1 Length = 506
Score = 119 bits (299), Expect = 7e-26 Identities = 55/90 (61%), Positives = 66/90 (73%) Frame = +2
Query: 2 TPSHCLFLWAGGSELTRILEDDNKIMPDKFIPYEVRKELAEIIPGLRPWEVFEIEQIMES 181 TPSH LFLWA GSELT ILE+D MP+K+IP ++R +LAE+IPGLRPWEV +EQ M+ Sbjct: 356 TPSHALFLWASGSELTTILEED--YMPNKYIPKDLRLQLAEVIPGLRPWEVLSVEQAMDQ 413
Query: 182 VTYGEKWYREPLSEFTMRADYDEAWFNDYK 271 +TYG +WYREP FT Y E W ND K Sbjct: 414 ITYGGEWYREPFGMFTTGPPYIENWNNDVK 443
>tr|A5C555|A5C555_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043666 PE=4 SV=1 Length = 1352
Score = 119 bits (299), Expect = 7e-26 Identities = 55/90 (61%), Positives = 66/90 (73%) Frame = +2
Query: 2 TPSHCLFLWAGGSELTRILEDDNKIMPDKFIPYEVRKELAEIIPGLRPWEVFEIEQIMES 181 TPSH LFLWA GSELT ILE+D MP+K+IP ++R +LAE+IPGLRPWEV +EQ M+ Sbjct: 1202 TPSHALFLWASGSELTTILEED--YMPNKYIPKDLRLQLAEVIPGLRPWEVLSVEQAMDQ 1259
Query: 182 VTYGEKWYREPLSEFTMRADYDEAWFNDYK 271 +TYG +WYREP FT Y E W ND K Sbjct: 1260 ITYGGEWYREPFGMFTTGPPYIENWNNDVK 1289
>tr|Q7Y1W1|Q7Y1W1_ARATH Putative uncharacterized protein At5g01590 OS=Arabidopsis thaliana GN=At5g01590 PE=2 SV=1 Length = 527
Score = 113 bits (282), Expect = 7e-24 Identities = 51/85 (60%), Positives = 63/85 (74%) Frame = +2
Query: 2 TPSHCLFLWAGGSELTRILEDDNKIMPDKFIPYEVRKELAEIIPGLRPWEVFEIEQIMES 181 TPSH LFLWA GSELT +LE D+ MP+KFIP ++R ELA++IPGLRPWEV IEQ M+ Sbjct: 359 TPSHALFLWASGSELTTVLESDH--MPNKFIPKQLRLELAKVIPGLRPWEVISIEQAMDQ 416
Query: 182 VTYGEKWYREPLSEFTMRADYDEAW 256 ++YG +WYREPL +T Y W Sbjct: 417 ISYGGEWYREPLGTYTTGPPYIREW 441
>tr|Q7Y1Z4|Q7Y1Z4_ARATH Putative uncharacterized protein At5g01590 OS=Arabidopsis thaliana GN=At5g01590 PE=2 SV=1 Length = 527
Score = 111 bits (278), Expect = 2e-23 Identities = 50/85 (58%), Positives = 63/85 (74%) Frame = +2
Query: 2 TPSHCLFLWAGGSELTRILEDDNKIMPDKFIPYEVRKELAEIIPGLRPWEVFEIEQIMES 181 TPSH LFLWA GSELT +LE D+ MP+KFIP ++R ELA++IPGLRPWEV IEQ ++ Sbjct: 359 TPSHALFLWASGSELTTVLESDH--MPNKFIPKQLRLELAKVIPGLRPWEVISIEQAVDQ 416
Query: 182 VTYGEKWYREPLSEFTMRADYDEAW 256 ++YG +WYREPL +T Y W Sbjct: 417 ISYGGEWYREPLGTYTTGPPYIREW 441
>tr|Q9M016|Q9M016_ARATH Putative uncharacterized protein F7A7_110 OS=Arabidopsis thaliana GN=F7A7_110 PE=4 SV=1 Length = 559
Score = 94.7 bits (234), Expect = 2e-18 Identities = 46/85 (54%), Positives = 55/85 (64%) Frame = +2
Query: 2 TPSHCLFLWAGGSELTRILEDDNKIMPDKFIPYEVRKELAEIIPGLRPWEVFEIEQIMES 181 TPSH LFLWA GSELT +LE D+ MP K LA++IPGLRPWEV IEQ M+ Sbjct: 400 TPSHALFLWASGSELTTVLESDH--MPTK---------LAKVIPGLRPWEVISIEQAMDQ 448
Query: 182 VTYGEKWYREPLSEFTMRADYDEAW 256 ++YG +WYREPL +T Y W Sbjct: 449 ISYGGEWYREPLGTYTTGPPYIREW 473
>tr|Q1ZZ58|Q1ZZ58_9HEPC Genome polyprotein OS=Hepatitis C virus subtype 4a PE=4 SV=1 Length = 3008
Score = 35.4 bits (80), Expect = 1.8 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 8/70 (11%) Frame = +2
Query: 125 IIPGLRPWEVFEIEQIMESVTYGEKWYREPLSEFTMRADYDEAWFN--------DYKDKW 280 + PG RP +F+ I E G WY +E T R A+FN D+ + W Sbjct: 1502 VTPGERPSGIFDTSVICECYDAGCAWYELTPAETTTRL---RAYFNTPGLPVCQDHLEFW 1558
Query: 281 EGLFDDLDEI 310 EG+F L +I Sbjct: 1559 EGVFTGLTQI 1568
>tr|A5KC97|A5KC97_PLAVI Variable surface protein Vir12-related OS=Plasmodium vivax GN=PVX_001645 PE=4 SV=1 Length = 529
Score = 35.4 bits (80), Expect = 1.8 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 15/121 (12%) Frame = +2
Query: 98 YEVRKELAEIIPGLRPWEVFEIEQIMESVTYGEKWYREPLSEFTMRADYDEAWFNDYKDK 277 YE K++ + G + E+F + + ++ V Y K + SE DY +F D+KD+ Sbjct: 93 YEQIKKIPKT--GEKKNEIFFLTEKLKKVQYSIK---KNCSENFECYDYYNDYFGDWKDE 147
Query: 278 WE--GLFDDLDEIFAKVDKKE--------FIKKLKAAERRKMLKG*ANCKF-----HFYF 412 E F + DEI + +DKKE ++K + ++K G N K+ H++ Sbjct: 148 KELYEYFLNFDEIDSNIDKKEDVNENYKRYLKHILDLYKKKKKSGCCNIKYYHLCDHYFR 207
Query: 413 C 415 C Sbjct: 208 C 208
>tr|Q8WRS6|Q8WRS6_PLAFA Normocyte-binding protein 1 OS=Plasmodium falciparum GN=NBP1 PE=4 SV=2 Length = 2957
Score = 34.7 bits (78), Expect = 3.0 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 7/91 (7%) Frame = +2
Query: 101 EVRKELAEIIPGLRPWEVFEIEQIMESVTYGEKWYREPLSEFTMRADYDEAWFNDYKDKW 280 ++ KEL E ++ EI I E++ E WY + + E+ +R + ND KDK Sbjct: 1398 DLYKELDEKYSEFNKTKIEEINNIRENINNVEIWYEKNIIEYFLR------YMNDQKDKA 1451
Query: 281 EGLFDDLD------EIFAK-VDKKEFIKKLK 352 +++D EI +K ++ + +++ LK Sbjct: 1452 AKYMENIDTYKNNIEIISKQINPENYVETLK 1482
>tr|Q4QPV3|Q4QPV3_DROME CG15705 OS=Drosophila melanogaster GN=CG15705 PE=4 SV=1 Length = 104
Score = 34.7 bits (78), Expect = 3.0 Identities = 15/54 (27%), Positives = 33/54 (61%) Frame = +2
Query: 89 FIPYEVRKELAEIIPGLRPWEVFEIEQIMESVTYGEKWYREPLSEFTMRADYDE 250 ++ Y KE A+++ G++P + + ++E VTY E W + +SE +R++ ++ Sbjct: 42 YMKYPSNKEKAKLLKGVKPSKSVTFKTVVELVTYSENW-KMKMSESRLRSEDEQ 94
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