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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915346
Clone id YMU001_000070_D12
Library
Length 373
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TATCCTCTTTGAATTCTTCCTCTGGCTCATCGAAAATGATGATCCATCTCTGCGGGATCT
TAACCTTGGAGACCTTGTAGAGTACTATGGATCGGAATCCTGATTTCTTCTCCATCCAAG
CTCAGGAGCCACATATGTGCTTTCTCAATAACCTCGGTGCCCCTATACCACAAAGACTCT
ACACAAACGAGAGTAAGGCATACTTTTCTTTTGCTTTCTACAATATTTCCGGTTTATCAA
TCTAAATTCTTGCAAGTTATACATTACACACATTCACTTTAAGAACCGATTGATTGGTCG
GGTCGACTCAACTTGTCGATTGTAATGGCTGATATAGCATTGTCATGTCCTCTGTGAATG
ATAAAGCTCTTCA
■■Homology search results ■■ -
sp_hit_id Q8WZ42
Definition sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens
Align length 41
Score (bit) 31.6
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915346|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_D12.
         (373 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2           32   1.3  
sp|Q9CMZ1|Y659_PASMU UPF0192 protein PM0659 OS=Pasteurella multo...    31   2.2  
sp|A5VKY3|MURC_LACRD UDP-N-acetylmuramate--L-alanine ligase OS=L...    30   2.8  
sp|P50108|MNN10_YEAST Probable alpha-1,6-mannosyltransferase MNN...    29   8.3  

>sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2
          Length = 34350

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 16/41 (39%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
 Frame = -2

Query: 126   PELGWRRNQDSDP*YSTRSPRLR--SRRDGSSFSMSQRKNS 10
             PE+ W +++D+     TRSPR++  +R D S FS+++ K S
Sbjct: 19158 PEVAWTKDKDATD--LTRSPRVKIDTRADSSKFSLTKAKRS 19196


>sp|Q9CMZ1|Y659_PASMU UPF0192 protein PM0659 OS=Pasteurella
           multocida GN=PM0659 PE=3 SV=1
          Length = 1905

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 142 FSITSVPLY-HKDSTQTRVRHTFLLLSTIFPVYQSKF 249
           F  T V  Y H+D TQ +VRH    LS   PV + KF
Sbjct: 139 FKATLVEQYFHQDPTQAQVRHAIFKLSFTHPVDRQKF 175


>sp|A5VKY3|MURC_LACRD UDP-N-acetylmuramate--L-alanine ligase
           OS=Lactobacillus reuteri (strain DSM 20016) GN=murC PE=3
           SV=1
          Length = 434

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 17  FLWLIENDDPSLRDLNLGDLVEYYGS 94
           F W    DDPSLRDLN+   V YYG+
Sbjct: 203 FAW---GDDPSLRDLNVDVPVYYYGT 225


>sp|P50108|MNN10_YEAST Probable alpha-1,6-mannosyltransferase MNN10
           OS=Saccharomyces cerevisiae GN=MNN10 PE=1 SV=1
          Length = 393

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 21/74 (28%), Positives = 34/74 (45%)
 Frame = +3

Query: 36  MMIHLCGILTLETL*STMDRNPDFFSIQAQEPHMCFLNNLGAPIPQRLYTNESKAYFSFA 215
           ++I L   L +    ST+ RNP   S Q Q  +   L+N G+ I  + Y         ++
Sbjct: 55  LLISLALFLFIWISDSTISRNPSTTSFQGQNSNDNKLSNTGSSINSKRYVPPYSKRSRWS 114

Query: 216 FYNISGLSI*ILAS 257
           F+N     + ILA+
Sbjct: 115 FWNQDPRIVIILAA 128
tr_hit_id A7PCC3
Definition tr|A7PCC3|A7PCC3_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera
Align length 33
Score (bit) 36.6
E-value 0.64
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915346|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_D12.
         (373 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PCC3|A7PCC3_VITVI Chromosome chr2 scaffold_11, whole genome...    37   0.64 
tr|Q8GWV0|Q8GWV0_ARATH Putative uncharacterized protein At2g3529...    35   1.4  
tr|O82164|O82164_ARATH Putative uncharacterized protein At2g3529...    35   1.4  
tr|Q6ZKQ7|Q6ZKQ7_ORYSJ Os08g0452500 protein OS=Oryza sativa subs...    34   4.1  
tr|Q69LK3|Q69LK3_ORYSJ Auxin-induced protein-like OS=Oryza sativ...    34   4.1  
tr|B6U6A8|B6U6A8_MAIZE SAUR37-auxin-responsive SAUR family membe...    34   4.1  
tr|B6SSU1|B6SSU1_MAIZE SAUR37-auxin-responsive SAUR family membe...    34   4.1  
tr|B4FC68|B4FC68_MAIZE Putative uncharacterized protein OS=Zea m...    34   4.1  
tr|A2YVU1|A2YVU1_ORYSI Putative uncharacterized protein OS=Oryza...    34   4.1  
tr|Q8VAC3|Q8VAC3_WSSV Wsv502 OS=White spot syndrome virus PE=4 SV=1    34   4.1  
tr|Q8QTH2|Q8QTH2_WSSV WSSV027 OS=White spot syndrome virus PE=4 ...    34   4.1  
tr|Q5EM24|Q5EM24_WSSV Variable region Orf23/24 (Fragment) OS=Whi...    34   4.1  
tr|B6TWI9|B6TWI9_MAIZE SAUR33-auxin-responsive SAUR family membe...    33   5.4  
tr|A7PWT7|A7PWT7_VITVI Chromosome chr19 scaffold_35, whole genom...    33   7.0  
tr|A7PDR2|A7PDR2_VITVI Chromosome chr11 scaffold_13, whole genom...    33   7.0  
tr|Q9XTY5|Q9XTY5_CAEEL Protein T03D8.2, confirmed by transcript ...    33   7.0  
tr|B6TUQ7|B6TUQ7_MAIZE SAUR33-auxin-responsive SAUR family membe...    33   9.2  
tr|B6T035|B6T035_MAIZE SAUR33-auxin-responsive SAUR family membe...    33   9.2  
tr|B6SH19|B6SH19_MAIZE SAUR33-auxin-responsive SAUR family membe...    33   9.2  
tr|B0ZBG7|B0ZBG7_WSSV ORF23/24 (Fragment) OS=White spot syndrome...    33   9.2  
tr|A6TG15|A6TG15_KLEP7 Putative uncharacterized protein OS=Klebs...    33   9.2  
tr|Q5ATF7|Q5ATF7_EMENI Putative uncharacterized protein OS=Emeri...    33   9.2  

>tr|A7PCC3|A7PCC3_VITVI Chromosome chr2 scaffold_11, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015804001
           PE=4 SV=1
          Length = 124

 Score = 36.6 bits (83), Expect = 0.64
 Identities = 15/33 (45%), Positives = 23/33 (69%)
 Frame = +2

Query: 2   ILFEFFLWLIENDDPSLRDLNLGDLVEYYGSES 100
           ILFE  LWL+ ND  SL  LNL +++++Y  ++
Sbjct: 92  ILFEHMLWLMYNDCSSLFQLNLREIIDFYAQDN 124


>tr|Q8GWV0|Q8GWV0_ARATH Putative uncharacterized protein At2g35290
           (At2g35290) OS=Arabidopsis thaliana GN=At2g35290 PE=2
           SV=1
          Length = 121

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 2   ILFEFFLWLIENDDPSLRDLNLGDLVEYYGSE 97
           ILFE  LWL+ ND  +  DL++ +++E+Y  +
Sbjct: 89  ILFEHLLWLLRNDASTFSDLDVLEIIEFYAQD 120


>tr|O82164|O82164_ARATH Putative uncharacterized protein At2g35290
           OS=Arabidopsis thaliana GN=At2g35290 PE=4 SV=1
          Length = 91

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 13/32 (40%), Positives = 22/32 (68%)
 Frame = +2

Query: 2   ILFEFFLWLIENDDPSLRDLNLGDLVEYYGSE 97
           ILFE  LWL+ ND  +  DL++ +++E+Y  +
Sbjct: 59  ILFEHLLWLLRNDASTFSDLDVLEIIEFYAQD 90


>tr|Q6ZKQ7|Q6ZKQ7_ORYSJ Os08g0452500 protein OS=Oryza sativa subsp.
           japonica GN=OJ1117_F10.20 PE=2 SV=1
          Length = 133

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 2   ILFEFFLWLIENDDPSLRDLNLGDLVEYY 88
           +LFE  LW++EN DP    L+  +LVEYY
Sbjct: 105 VLFEHLLWMLENADPQPESLD--ELVEYY 131


>tr|Q69LK3|Q69LK3_ORYSJ Auxin-induced protein-like OS=Oryza sativa
           subsp. japonica GN=OJ1328_D07.12 PE=4 SV=1
          Length = 165

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 2   ILFEFFLWLIENDDPSLRDLNLGDLVEYY 88
           +LFE  LW++EN DP    L+  +LVEYY
Sbjct: 137 VLFEHLLWMLENADPQPESLD--ELVEYY 163


>tr|B6U6A8|B6U6A8_MAIZE SAUR37-auxin-responsive SAUR family member
           OS=Zea mays PE=2 SV=1
          Length = 160

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 2   ILFEFFLWLIENDDPSLRDLNLGDLVEYY 88
           +LFE  LW++EN DP    L+  +LVEYY
Sbjct: 132 VLFEHLLWMLENADPQPESLD--ELVEYY 158


>tr|B6SSU1|B6SSU1_MAIZE SAUR37-auxin-responsive SAUR family member
           OS=Zea mays PE=2 SV=1
          Length = 157

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +2

Query: 2   ILFEFFLWLIENDDPSLRDLNLGDLVEYY 88
           +LFE  LW++EN DP  +  +L +LVEYY
Sbjct: 129 VLFEHLLWMLENADP--QPESLAELVEYY 155


>tr|B4FC68|B4FC68_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 156

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 2   ILFEFFLWLIENDDPSLRDLNLGDLVEYY 88
           +LFE  LW++EN DP    L+  +LVEYY
Sbjct: 128 VLFEHLLWMLENADPQPESLD--ELVEYY 154


>tr|A2YVU1|A2YVU1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_29446 PE=4 SV=1
          Length = 136

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 2   ILFEFFLWLIENDDPSLRDLNLGDLVEYY 88
           +LFE  LW++EN DP    L+  +LVEYY
Sbjct: 108 VLFEHLLWMLENADPQPESLD--ELVEYY 134


>tr|Q8VAC3|Q8VAC3_WSSV Wsv502 OS=White spot syndrome virus PE=4 SV=1
          Length = 1009

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -3

Query: 227 NIVESKRKVCLTLVCVESLWYRGTEVIEKAHMWLLSLDGEEIRIPIHSTLQGLQ 66
           N +  K K CLTL    SL+YRG  V+   H+ + +L      I  HST+  L+
Sbjct: 31  NTIMLKGKTCLTLSSELSLFYRGKNVVASHHLKIRALIIYNFYILYHSTVVHLR 84