BP915349 |
Clone id |
YMU001_000070_E03 |
Library |
YMU01 |
Length |
458 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000070_E03. |
Accession |
BP915349 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL230Contig1 |
Sequence |
ATCTGTGTATTTTAGCACTCGCAGCTTCAAGTCATGGTGTTTGGCAAGGCAAAGAATGCG GCTCTGCAAGTGGTTAAAGGTGTAGACCCTGAGCGCTACCAAGGAAAATGGTATGAGATA GCCAACCTTCCGTCGCGTTTCCAACCTAAAGGAGGCAAGAACACAACTGCGACATACACT TTGCAGCCTGATGGTACCATCCATGTCTTGAATGAGACCTGGCTCGATGGGAAACGAGCC TCCATTGAAGGTTCTGCATGGAAGGTTGATCCCAACAGTGACGAAGCGAAGTTGAAAGTT CGTTTTTGGCTGCCCCCTTTCCTTCCCCTCTTTCCTGTGAATGGCGATTACTGGGTTATG GTCCTTGATTCGGAGTACCGATGGGCTCTCGTCGGCCAGCCCTCAAGGAATTACCTTTGG GTTCTGAGTCGGACCCCACAGTTGAGTGATGATGTATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q46036 |
Definition |
sp|Q46036|BLC_CITFR Outer membrane lipoprotein blc OS=Citrobacter freundii |
Align length |
132 |
Score (bit) |
86.7 |
E-value |
5.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915349|Adiantum capillus-veneris mRNA, clone: YMU001_000070_E03. (458 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q46036|BLC_CITFR Outer membrane lipoprotein blc OS=Citrobacte... 87 5e-17 sp|P0A901|BLC_ECOLI Outer membrane lipoprotein blc OS=Escherichi... 86 8e-17 sp|P0A902|BLC_ECO57 Outer membrane lipoprotein blc OS=Escherichi... 86 8e-17 sp|Q08790|BLC_VIBCH Outer membrane lipoprotein blc OS=Vibrio cho... 67 5e-11 sp|P05090|APOD_HUMAN Apolipoprotein D OS=Homo sapiens GN=APOD PE... 60 6e-09 sp|Q8SPI0|APOD_MACFA Apolipoprotein D OS=Macaca fascicularis GN=... 59 1e-08 sp|P23593|APOD_RAT Apolipoprotein D OS=Rattus norvegicus GN=Apod... 57 5e-08 sp|Q5URA7|YR877_MIMIV Putative lipocalin R877 OS=Acanthamoeba po... 56 7e-08 sp|P51910|APOD_MOUSE Apolipoprotein D OS=Mus musculus GN=Apod PE... 55 1e-07 sp|Q32KY0|APOD_BOVIN Apolipoprotein D OS=Bos taurus GN=APOD PE=2... 55 2e-07 sp|P51909|APOD_CAVPO Apolipoprotein D OS=Cavia porcellus GN=APOD... 52 9e-07 sp|P37153|APOD_RABIT Apolipoprotein D OS=Oryctolagus cuniculus G... 49 1e-05 sp|P09464|BBP_PIEBR Bilin-binding protein OS=Pieris brassicae PE... 40 0.006 sp|P49291|LAZA_SCHAM Lazarillo protein OS=Schistocerca americana... 37 0.054 sp|P08938|PURP_CHICK Purpurin OS=Gallus gallus PE=1 SV=1 36 0.070 sp|Q5R5N6|BGLR_PONAB Beta-glucuronidase OS=Pongo abelii GN=GUSB ... 35 0.20 sp|P24775|RETB2_ONCMY Plasma retinol-binding protein 2 OS=Oncorh... 34 0.27 sp|P08236|BGLR_HUMAN Beta-glucuronidase OS=Homo sapiens GN=GUSB ... 33 0.59 sp|A2R9H9|INO80_ASPNC Putative DNA helicase ino80 OS=Aspergillus... 32 1.7 sp|P24774|RETB1_ONCMY Plasma retinol-binding protein 1 OS=Oncorh... 31 2.9 sp|Q02836|POL_SIVG1 Gag-Pol polyprotein OS=Simian immunodeficien... 31 2.9 sp|P02755|LACB_BUBBU Beta-lactoglobulin OS=Bubalus bubalis GN=LG... 30 3.8 sp|P02754|LACB_BOVIN Beta-lactoglobulin OS=Bos taurus GN=LGB PE=... 30 3.8 sp|A8AB06|SYR_IGNH4 Arginyl-tRNA synthetase OS=Ignicoccus hospit... 30 5.0 sp|P02756|LACB_CAPHI Beta-lactoglobulin OS=Capra hircus GN=LGB P... 30 5.0 sp|O87388|SOXB_RHIME Sarcosine oxidase subunit beta OS=Rhizobium... 30 6.6 sp|P60437|RL2_YERPS 50S ribosomal protein L2 OS=Yersinia pseudot... 30 6.6 sp|A4TGZ5|RL2_YERPP 50S ribosomal protein L2 OS=Yersinia pestis ... 30 6.6 sp|Q1CCU7|RL2_YERPN 50S ribosomal protein L2 OS=Yersinia pestis ... 30 6.6 sp|P60436|RL2_YERPE 50S ribosomal protein L2 OS=Yersinia pestis ... 30 6.6
>sp|Q46036|BLC_CITFR Outer membrane lipoprotein blc OS=Citrobacter freundii PE=3 SV=1 Length = 177
Score = 86.7 bits (213), Expect = 5e-17 Identities = 56/132 (42%), Positives = 75/132 (56%), Gaps = 3/132 (2%) Frame = +1
Query: 70 VVKGVDPERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLDGKRA--S 243 VV D +RY G WYEIA RF+ +G TATY+L+ DG I+V+N+ + + Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLDKVTATYSLRDDGGINVINKGYNPDREMWQK 88
Query: 244 IEGSAWKV-DPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLW 420 EG A+ DP++ A LKV G Y V+ LD EYR ALV P R+YLW Sbjct: 89 TEGKAYFTGDPST--AALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLW 139
Query: 421 VLSRTPQLSDDV 456 +LSRTP +SD++ Sbjct: 140 ILSRTPTISDEM 151
>sp|P0A901|BLC_ECOLI Outer membrane lipoprotein blc OS=Escherichia coli (strain K12) GN=blc PE=1 SV=1 Length = 177
Score = 85.9 bits (211), Expect = 8e-17 Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 2/131 (1%) Frame = +1
Query: 70 VVKGVDPERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLD--GKRAS 243 VV D +RY G WYEIA RF+ +G + TATY+L+ DG ++V+N+ + G Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 88
Query: 244 IEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLWV 423 EG A+ + A LKV G Y V+ LD EYR ALV P R+YLW+ Sbjct: 89 SEGKAYFTGAPT-RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 140
Query: 424 LSRTPQLSDDV 456 LSRTP +SD+V Sbjct: 141 LSRTPTISDEV 151
>sp|P0A902|BLC_ECO57 Outer membrane lipoprotein blc OS=Escherichia coli O157:H7 GN=blc PE=3 SV=1 Length = 177
Score = 85.9 bits (211), Expect = 8e-17 Identities = 55/131 (41%), Positives = 73/131 (55%), Gaps = 2/131 (1%) Frame = +1
Query: 70 VVKGVDPERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLD--GKRAS 243 VV D +RY G WYEIA RF+ +G + TATY+L+ DG ++V+N+ + G Sbjct: 30 VVNNFDAKRYLGTWYEIARFDHRFE-RGLEKVTATYSLRDDGGLNVINKGYNPDRGMWQQ 88
Query: 244 IEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLWV 423 EG A+ + A LKV G Y V+ LD EYR ALV P R+YLW+ Sbjct: 89 SEGKAYFTGAPT-RAALKVSFFGPFY-------GGYNVIALDREYRHALVCGPDRDYLWI 140
Query: 424 LSRTPQLSDDV 456 LSRTP +SD+V Sbjct: 141 LSRTPTISDEV 151
>sp|Q08790|BLC_VIBCH Outer membrane lipoprotein blc OS=Vibrio cholerae GN=blc PE=3 SV=2 Length = 171
Score = 66.6 bits (161), Expect = 5e-11 Identities = 47/129 (36%), Positives = 66/129 (51%), Gaps = 3/129 (2%) Frame = +1
Query: 61 ALQVVKGVDPERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLD--GK 234 +++ V + Y GKWYE+A L F+ +G TA Y ++ DG I VLN + + G+ Sbjct: 22 SVKPVSDFELNNYLGKWYEVARLDHSFE-RGLSQVTAEYRVRNDGGISVLNRGYSEEKGE 80
Query: 235 RASIEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSE-YRWALVGQPSRN 411 EG A+ V+ ++D LKV G Y V LD E Y +A V P+ Sbjct: 81 WKEAEGKAYFVNGSTD-GYLKVSFFGPFY-------GSYVVFELDRENYSYAFVSGPNTE 132
Query: 412 YLWVLSRTP 438 YLW+LSRTP Sbjct: 133 YLWLLSRTP 141
>sp|P05090|APOD_HUMAN Apolipoprotein D OS=Homo sapiens GN=APOD PE=1 SV=1 Length = 189
Score = 59.7 bits (143), Expect = 6e-09 Identities = 47/147 (31%), Positives = 71/147 (48%), Gaps = 8/147 (5%) Frame = +1
Query: 28 QVMVFGKAKNAALQVVKGVDPERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHV 207 Q GK N +Q + D +Y G+WYEI +P+ F+ G+ A Y+L +G I V Sbjct: 21 QAFHLGKCPNPPVQ--ENFDVNKYLGRWYEIEKIPTTFE--NGRCIQANYSLMENGKIKV 76
Query: 208 LN-ETWLDGKRASIEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRW 384 LN E DG IEG A V+ ++ AKL+V+ + YW++ D E + Sbjct: 77 LNQELRADGTVNQIEGEATPVN-LTEPAKLEVKFSWFMP------SAPYWILATDYE-NY 128
Query: 385 ALVGQPS-------RNYLWVLSRTPQL 444 ALV + ++ W+L+R P L Sbjct: 129 ALVYSCTCIIQLFHVDFAWILARNPNL 155
>sp|Q8SPI0|APOD_MACFA Apolipoprotein D OS=Macaca fascicularis GN=APOD PE=2 SV=1 Length = 189
Score = 58.5 bits (140), Expect = 1e-08 Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 8/146 (5%) Frame = +1
Query: 40 FGKAKNAALQVVKGVDPERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLN-E 216 F K + V + DP +Y G+WYEI +P+ F+ G+ A Y+L+ +G I VLN E Sbjct: 23 FRLGKCTSPPVQENFDPNKYFGRWYEIEKIPTTFEK--GRCIQANYSLKENGKIKVLNQE 80
Query: 217 TWLDGKRASIEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVG 396 DG IEG A V+ ++ AKL+V+ + YWV+ D E +ALV Sbjct: 81 LRADGTVNQIEGEASPVN-ITEPAKLEVKFFWFMP------SAPYWVLATDYE-NYALVY 132
Query: 397 QPSR-------NYLWVLSRTPQLSDD 453 +Y W+L+R L + Sbjct: 133 SCVSIINLFRVDYAWILARNRHLPSE 158
>sp|P23593|APOD_RAT Apolipoprotein D OS=Rattus norvegicus GN=Apod PE=1 SV=1 Length = 189
Score = 56.6 bits (135), Expect = 5e-08 Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 8/133 (6%) Frame = +1
Query: 70 VVKGVDPERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLN-ETWLDGKRASI 246 V + D ++Y G+WYEI +P F+ G A Y+L +G I VLN E DG + Sbjct: 33 VQENFDVKKYLGRWYEIEKIPVSFEK--GNCIQANYSLMENGNIKVLNKELRPDGTLNQV 90
Query: 247 EGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSR------ 408 EG A K S+ AKL+V+ YW++ D E +ALV + Sbjct: 91 EGEA-KQSNMSEPAKLEVQFFSLMPP------APYWILATDYE-SYALVYSCTTFFWFFH 142
Query: 409 -NYLWVLSRTPQL 444 +Y+W+L R P L Sbjct: 143 VDYVWILGRNPYL 155
>sp|Q5URA7|YR877_MIMIV Putative lipocalin R877 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R877 PE=1 SV=1 Length = 169
Score = 56.2 bits (134), Expect = 7e-08 Identities = 42/123 (34%), Positives = 58/123 (47%), Gaps = 6/123 (4%) Frame = +1
Query: 82 VDPERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLNETWLDGKRASIEGSAW 261 +D +RY G WYEIA LP+ FQ KG N+TA Y L I V N ++G+ S+ G+A Sbjct: 28 LDIQRYMGTWYEIARLPTSFQ-KGCVNSTANYQLLEPNKIQVTNNCEINGRINSVTGTAI 86
Query: 262 K------VDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSRNYLWV 423 V A L V Y V+ +D Y++A+V + LW+ Sbjct: 87 PAANTRIVSGFLTPASLMVNFGYGF--------SPYNVIFIDENYQYAIV-SGGNDTLWI 137
Query: 424 LSR 432 LSR Sbjct: 138 LSR 140
>sp|P51910|APOD_MOUSE Apolipoprotein D OS=Mus musculus GN=Apod PE=2 SV=1 Length = 189
Score = 55.5 bits (132), Expect = 1e-07 Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 8/133 (6%) Frame = +1
Query: 70 VVKGVDPERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHVLN-ETWLDGKRASI 246 V + D ++Y G+WYEI +P+ F+ G A Y+L +G I VLN E DG + Sbjct: 33 VQENFDVKKYLGRWYEIEKIPASFEK--GNCIQANYSLMENGNIEVLNKELSPDGTMNQV 90
Query: 247 EGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRWALVGQPSR------ 408 +G A K S+ AKL+V+ YW++ D E +ALV + Sbjct: 91 KGEA-KQSNVSEPAKLEVQFFPLMPP------APYWILATDYE-NYALVYSCTTFFWLFH 142
Query: 409 -NYLWVLSRTPQL 444 +++W+L R P L Sbjct: 143 VDFVWILGRNPYL 155
>sp|Q32KY0|APOD_BOVIN Apolipoprotein D OS=Bos taurus GN=APOD PE=2 SV=1 Length = 189
Score = 54.7 bits (130), Expect = 2e-07 Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 8/147 (5%) Frame = +1
Query: 28 QVMVFGKAKNAALQVVKGVDPERYQGKWYEIANLPSRFQPKGGKNTTATYTLQPDGTIHV 207 Q GK + +Q + D +Y GKWYEI +P F+ G A Y+L+ +G + V Sbjct: 21 QAFHLGKCPHPPVQ--ENFDVNKYLGKWYEIEKIPVSFEK--GSCIQANYSLKENGNVEV 76
Query: 208 LN-ETWLDGKRASIEGSAWKVDPNSDEAKLKVRXXXXXXXXXXXVNGDYWVMVLDSEYRW 384 +N E DG IEG A + ++ AKL V+ + YWV+ D E + Sbjct: 77 INKELRADGTVNQIEGEA-TPENITEPAKLAVKFFWFMP------SAPYWVLATDYE-NY 128
Query: 385 ALVGQPS-------RNYLWVLSRTPQL 444 ALV + +++W+L R P L Sbjct: 129 ALVYSCTTIIWLFHMDHVWILGRNPYL 155
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q38JC5 |
Definition |
tr|Q38JC5|Q38JC5_PRUPE Temperature-induced lipocalin OS=Prunus persica |
Align length |
131 |
Score (bit) |
184.0 |
E-value |
2.0e-45 |
Report |
|