BP915354 |
Clone id |
YMU001_000070_E08 |
Library |
YMU01 |
Length |
238 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000070_E08. |
Accession |
BP915354 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TCTAAGAAGCCCTCGCGCCCTGTAATTCGCGTCTTGCACTCTCACTTTCAATGTGCCCAC ATCTGTATCGAATGTGTCCAGTGCAACAGTTTGGCTTGATATCTCTGATCCCATGTCTTG ACTCATGATCTTTAAGTCATCCAACACATTACTTATAGCTGATAGTGCATCATCTTGTTT GGCCTTTTCAACCTCCAATTTGTCATATGTCGTTTGCTTGATGTTGGCAGAGGGTGTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LMG8 |
Definition |
sp|Q9LMG8|SNP30_ARATH Putative SNAP25 homologous protein SNAP30 OS=Arabidopsis thaliana |
Align length |
77 |
Score (bit) |
73.2 |
E-value |
4.0e-13 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PDF9 |
Definition |
tr|A7PDF9|A7PDF9_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
66 |
Score (bit) |
73.2 |
E-value |
6.0e-12 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915354|Adiantum capillus-veneris mRNA, clone: YMU001_000070_E08. (238 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PDF9|A7PDF9_VITVI Chromosome chr17 scaffold_12, whole genom... 73 6e-12 tr|A9PB46|A9PB46_POPTR Putative uncharacterized protein OS=Popul... 72 1e-11 tr|Q6X9T3|Q6X9T3_HORVD SNAP-28 OS=Hordeum vulgare var. distichum... 72 2e-11 tr|Q10Q25|Q10Q25_ORYSJ Os03g0212400 protein OS=Oryza sativa subs... 71 3e-11 tr|B8AQS2|B8AQS2_ORYSI Putative uncharacterized protein OS=Oryza... 71 3e-11 tr|A3AFE9|A3AFE9_ORYSJ Putative uncharacterized protein OS=Oryza... 71 3e-11 tr|B6TWZ4|B6TWZ4_MAIZE SNAP25 homologous protein SNAP30 OS=Zea m... 70 5e-11 tr|B8LQ80|B8LQ80_PICSI Putative uncharacterized protein OS=Picea... 70 7e-11 tr|Q5EEP3|Q5EEP3_ORYSJ SNAP1 OS=Oryza sativa subsp. japonica GN=... 69 1e-10 tr|A3A6C0|A3A6C0_ORYSJ Putative uncharacterized protein OS=Oryza... 69 1e-10 tr|A2X4A5|A2X4A5_ORYSI Putative uncharacterized protein OS=Oryza... 69 1e-10 tr|A7P2H5|A7P2H5_VITVI Chromosome chr1 scaffold_5, whole genome ... 68 2e-10 tr|A5BGC6|A5BGC6_VITVI Putative uncharacterized protein OS=Vitis... 68 2e-10 tr|Q6H766|Q6H766_ORYSJ Os02g0529500 protein OS=Oryza sativa subs... 67 3e-10 tr|A2X5K5|A2X5K5_ORYSI Putative uncharacterized protein OS=Oryza... 67 3e-10 tr|A3A7K2|A3A7K2_ORYSJ Putative uncharacterized protein OS=Oryza... 66 7e-10 tr|Q6X9T4|Q6X9T4_HORVD SNAP-34 OS=Hordeum vulgare var. distichum... 64 4e-09 tr|B6SUS9|B6SUS9_MAIZE SNAP25 homologous protein SNAP29 OS=Zea m... 60 5e-08 tr|A9T617|A9T617_PHYPA Qb+Qc-SNARE, SNAP33-family OS=Physcomitre... 55 2e-06 tr|A9TIB5|A9TIB5_PHYPA Qb+Qc-SNARE, SNAP33-family OS=Physcomitre... 54 4e-06 tr|Q6X9T2|Q6X9T2_HORVD SNAP25-like protein C (Fragment) OS=Horde... 52 1e-05 tr|B4FMD5|B4FMD5_MAIZE Putative uncharacterized protein OS=Zea m... 50 7e-05 tr|A5A0E1|A5A0E1_LATJA Synaptosomal-associated protein OS=Lateol... 48 2e-04 tr|Q4REP6|Q4REP6_TETNG Synaptosomal-associated protein (Fragment... 48 3e-04 tr|A9SYL3|A9SYL3_PHYPA Predicted protein OS=Physcomitrella paten... 47 4e-04 tr|A9UL74|A9UL74_XENTR LOC100135161 protein OS=Xenopus tropicali... 46 0.001 tr|Q869G6|Q869G6_LYMST Synaptosomal-associated protein OS=Lymnae... 46 0.001 tr|O01389|O01389_HIRME Synaptosomal-associated protein OS=Hirudo... 45 0.001 tr|A7S070|A7S070_NEMVE Predicted protein OS=Nematostella vectens... 45 0.001 tr|Q6FQD6|Q6FQD6_CANGA Strain CBS138 chromosome I complete seque... 44 0.004
>tr|A7PDF9|A7PDF9_VITVI Chromosome chr17 scaffold_12, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016266001 PE=4 SV=1 Length = 305
Score = 73.2 bits (178), Expect = 6e-12 Identities = 37/66 (56%), Positives = 47/66 (71%) Frame = -2
Query: 201 KLEVEKAKQDDALSAISNVLDDLKIMSQDMGSEISSQTVALDTFDTDVGTLKVRVQDANY 22 K+EVE AKQDD LS +SN+LD+LK M+ DMG+EI S AL + DV L +R++D N Sbjct: 238 KVEVEHAKQDDTLSDLSNLLDELKYMAVDMGTEIESHNRALAPMEDDVDVLSIRIKDGNQ 297
Query: 21 RARGLL 4 RAR LL Sbjct: 298 RARRLL 303
>tr|A9PB46|A9PB46_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 282
Score = 72.4 bits (176), Expect = 1e-11 Identities = 39/66 (59%), Positives = 46/66 (69%) Frame = -2
Query: 201 KLEVEKAKQDDALSAISNVLDDLKIMSQDMGSEISSQTVALDTFDTDVGTLKVRVQDANY 22 K+E EK KQDDALS +SN+L DLK M+ DMGSE+ SQ +LD DV L RV+ AN Sbjct: 215 KVEAEKGKQDDALSDLSNILGDLKGMAIDMGSELDSQNKSLDHLSDDVDELNSRVKGANQ 274
Query: 21 RARGLL 4 RAR LL Sbjct: 275 RARRLL 280
>tr|Q6X9T3|Q6X9T3_HORVD SNAP-28 OS=Hordeum vulgare var. distichum PE=2 SV=1 Length = 249
Score = 71.6 bits (174), Expect = 2e-11 Identities = 37/70 (52%), Positives = 47/70 (67%) Frame = -2
Query: 213 TTYDKLEVEKAKQDDALSAISNVLDDLKIMSQDMGSEISSQTVALDTFDTDVGTLKVRVQ 34 T DK++ EKA+QDDA + +SN+L LK M+ DMG+EI Q +LDTF DV L RV+ Sbjct: 178 TEMDKIKAEKARQDDAFADLSNILGGLKDMALDMGTEIDRQNKSLDTFGDDVDELNFRVK 237
Query: 33 DANYRARGLL 4 AN R R LL Sbjct: 238 GANQRGRRLL 247
>tr|Q10Q25|Q10Q25_ORYSJ Os03g0212400 protein OS=Oryza sativa subsp. japonica GN=Os03g0212400 PE=2 SV=1 Length = 244
Score = 70.9 bits (172), Expect = 3e-11 Identities = 38/70 (54%), Positives = 48/70 (68%) Frame = -2
Query: 213 TTYDKLEVEKAKQDDALSAISNVLDDLKIMSQDMGSEISSQTVALDTFDTDVGTLKVRVQ 34 T +K++VE AKQDDALS +SN+L +LK M+ DMG+EI Q +LD F DV L RV+ Sbjct: 173 TAIEKVQVEIAKQDDALSDLSNMLGELKGMALDMGTEIERQNKSLDAFGDDVDELNFRVK 232
Query: 33 DANYRARGLL 4 AN R R LL Sbjct: 233 GANQRGRRLL 242
>tr|B8AQS2|B8AQS2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10502 PE=4 SV=1 Length = 244
Score = 70.9 bits (172), Expect = 3e-11 Identities = 38/70 (54%), Positives = 48/70 (68%) Frame = -2
Query: 213 TTYDKLEVEKAKQDDALSAISNVLDDLKIMSQDMGSEISSQTVALDTFDTDVGTLKVRVQ 34 T +K++VE AKQDDALS +SN+L +LK M+ DMG+EI Q +LD F DV L RV+ Sbjct: 173 TAIEKVQVEIAKQDDALSDLSNMLGELKGMALDMGTEIERQNKSLDAFGDDVDELNFRVK 232
Query: 33 DANYRARGLL 4 AN R R LL Sbjct: 233 GANQRGRRLL 242
>tr|A3AFE9|A3AFE9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009521 PE=4 SV=1 Length = 264
Score = 70.9 bits (172), Expect = 3e-11 Identities = 38/70 (54%), Positives = 48/70 (68%) Frame = -2
Query: 213 TTYDKLEVEKAKQDDALSAISNVLDDLKIMSQDMGSEISSQTVALDTFDTDVGTLKVRVQ 34 T +K++VE AKQDDALS +SN+L +LK M+ DMG+EI Q +LD F DV L RV+ Sbjct: 193 TAIEKVQVEIAKQDDALSDLSNMLGELKGMALDMGTEIERQNKSLDAFGDDVDELNFRVK 252
Query: 33 DANYRARGLL 4 AN R R LL Sbjct: 253 GANQRGRRLL 262
>tr|B6TWZ4|B6TWZ4_MAIZE SNAP25 homologous protein SNAP30 OS=Zea mays PE=2 SV=1 Length = 284
Score = 70.1 bits (170), Expect = 5e-11 Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 6/83 (7%) Frame = -2
Query: 234 PSANIKQ------TTYDKLEVEKAKQDDALSAISNVLDDLKIMSQDMGSEISSQTVALDT 73 P +N +Q + +K+E+EKAKQDD LS +SN+L +LK M+ DMGSEI QT A+ Sbjct: 200 PPSNARQFRSEPSSALEKVEIEKAKQDDDLSDLSNILTELKGMAVDMGSEIERQTKAMGD 259
Query: 72 FDTDVGTLKVRVQDANYRARGLL 4 + D L RV+ AN RAR LL Sbjct: 260 AEKDYDELNFRVKGANTRARRLL 282
>tr|B8LQ80|B8LQ80_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 462
Score = 69.7 bits (169), Expect = 7e-11 Identities = 40/73 (54%), Positives = 46/73 (63%) Frame = -2
Query: 222 IKQTTYDKLEVEKAKQDDALSAISNVLDDLKIMSQDMGSEISSQTVALDTFDTDVGTLKV 43 + T ++EVEK KQDDAL +SNVLD LK M+ DMGSEI Q ALD DV L Sbjct: 388 VADTPQVRIEVEKTKQDDALLDLSNVLDQLKEMAVDMGSEIERQNHALDPLADDVTELGY 447
Query: 42 RVQDANYRARGLL 4 RV+ AN R R LL Sbjct: 448 RVKGANARGRRLL 460
>tr|Q5EEP3|Q5EEP3_ORYSJ SNAP1 OS=Oryza sativa subsp. japonica GN=SNAP1 PE=2 SV=1 Length = 283
Score = 68.9 bits (167), Expect = 1e-10 Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 6/83 (7%) Frame = -2
Query: 234 PSANIKQ------TTYDKLEVEKAKQDDALSAISNVLDDLKIMSQDMGSEISSQTVALDT 73 P +N +Q + K+E+EKAKQDD LS +SN+L +LK M+ DMG+EI QT AL Sbjct: 199 PQSNARQFHSEPTSALQKVEMEKAKQDDGLSDLSNILTELKGMAVDMGTEIDRQTKALGD 258
Query: 72 FDTDVGTLKVRVQDANYRARGLL 4 + D L R++ AN RAR LL Sbjct: 259 SEKDYDELNFRIKGANTRARRLL 281
>tr|A3A6C0|A3A6C0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_006342 PE=4 SV=1 Length = 1452
Score = 68.9 bits (167), Expect = 1e-10 Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 6/83 (7%) Frame = -2
Query: 234 PSANIKQ------TTYDKLEVEKAKQDDALSAISNVLDDLKIMSQDMGSEISSQTVALDT 73 P +N +Q + K+E+EKAKQDD LS +SN+L +LK M+ DMG+EI QT AL Sbjct: 1368 PQSNARQFHSEPTSALQKVEMEKAKQDDGLSDLSNILTELKGMAVDMGTEIDRQTKALGD 1427
Query: 72 FDTDVGTLKVRVQDANYRARGLL 4 + D L R++ AN RAR LL Sbjct: 1428 SEKDYDELNFRIKGANTRARRLL 1450
|