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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915355
Clone id YMU001_000070_E09
Library
Length 512
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGGGAATATCAGCTCACAGAATCCCTACCAGTCTACACTGTGCAAGGCACTTAAGAATCC
CTACCAGTCTACATTGTGCAAGGCACTTATAGTTTTGGTTCTCACGTTGAGGCCATCACT
CTTCGCACGGGCTTACAATTCTGCATGCAAAGCATGCTAGGGCGATGGATTTGATTCTAC
CGCTTCATGCATTACGCTTCCGCTATCACACTCGCAGCTCTGTCAAGGACAGACTAAGAA
TGGATTGTTAATATGATTGTTGGTTGCTATCAACACACAACAACACTAAAAAGAACCTAA
AATTTTGACTAGATTCACCGACAAAGTGTCCTATTCAAGTCATCCTCCTACAATCACGAC
CCATACACGGTAGATGGTCAAGATTTGAATTGTGTATCATGTTGCCTCTCTTGATGAGAG
CGTCATACAGAAAGATTCTTGTATGCTTATAGGATAAGCTGCAAATCAGGCATAAGATGC
CTAAGAGCACACATTTTGGGCACACACACACT
■■Homology search results ■■ -
sp_hit_id Q55CY9
Definition sp|Q55CY9|GDT8_DICDI Probable serine/threonine-protein kinase gdt8 OS=Dictyostelium discoideum
Align length 65
Score (bit) 30.8
E-value 3.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915355|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_E09.
         (512 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q55CY9|GDT8_DICDI Probable serine/threonine-protein kinase gd...    31   3.8  

>sp|Q55CY9|GDT8_DICDI Probable serine/threonine-protein kinase gdt8
           OS=Dictyostelium discoideum GN=gdt8 PE=3 SV=1
          Length = 1326

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
 Frame = +3

Query: 312 DSPTKCPIQVILLQSRPIH----GRWSRFELCIMLPLLMRASYR---KILVCL*DKLQIR 470
           D+PT+ P Q  +L S+PI      R    EL I LP+ +  +      I++C+  K+Q  
Sbjct: 751 DTPTQTPTQTPILTSKPITQISVDRNENLELKIALPICLSLALLIGIIIMICIFKKVQSN 810

Query: 471 HKMPK 485
            K+ K
Sbjct: 811 SKLKK 815
tr_hit_id A7T327
Definition tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectensis
Align length 58
Score (bit) 35.0
E-value 2.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915355|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_E09.
         (512 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectens...    35   2.1  
tr|B7U381|B7U381_HRSV Glycoprotein (Fragment) OS=Human respirato...    34   4.8  
tr|B7BM42|B7BM42_9CLOT Putative uncharacterized protein OS=Clost...    33   8.1  

>tr|A7T327|A7T327_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g143825 PE=4 SV=1
          Length = 244

 Score = 35.0 bits (79), Expect = 2.1
 Identities = 21/58 (36%), Positives = 27/58 (46%)
 Frame = +3

Query: 33  LHCARHLRIPTSLHCARHL*FWFSR*GHHSSHGLTILHAKHARAMDLILPLHALRFRY 206
           LHC RHL +   LHC RHL   +     H    L + +  H R   L+L  H  R R+
Sbjct: 95  LHCMRHLVLQYHLHCMRHLVLQYHL---HRMQHLVLQYHLH-RMQHLVLQYHLHRMRH 148



 Score = 33.5 bits (75), Expect = 6.2
 Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
 Frame = +3

Query: 33  LHCARHLRIPTSLHCARHL*FWFSR*GHHSSHGLTILHAKHARAMDLILPLHALR---FR 203
           LHC RHL +   LHC RHL   +    H   H +   H    + + L   LH ++    +
Sbjct: 35  LHCMRHLVLQYHLHCMRHLVLQYHL--HRMQHLVLQYHLHRMQHLVLQYHLHCMQHLVLQ 92

Query: 204 YH 209
           YH
Sbjct: 93  YH 94


>tr|B7U381|B7U381_HRSV Glycoprotein (Fragment) OS=Human respiratory
           syncytial virus GN=G PE=4 SV=1
          Length = 107

 Score = 33.9 bits (76), Expect = 4.8
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
 Frame = +3

Query: 15  HRIPTSLHCARHLRIPT--------SLHCARHL*FWFSR*GHHSSHGLTILH--AKHARA 164
           H+ PT +HCARH  I T        ++HCARH     +    H+S  + +L+   KH + 
Sbjct: 31  HQYPT-IHCARHNHIKTHRKRHQHLTIHCARH-----NHIKTHNSTAIPLLNHPRKHNQL 84

Query: 165 MDLILPLHALRFRYHTRSSV 224
                 + AL  ++H ++ V
Sbjct: 85  HTNTHSIRALHIKFHPKTLV 104


>tr|B7BM42|B7BM42_9CLOT Putative uncharacterized protein
           OS=Clostridium hylemonae DSM 15053 GN=CLOHYLEM_01577
           PE=4 SV=1
          Length = 384

 Score = 33.1 bits (74), Expect = 8.1
 Identities = 22/70 (31%), Positives = 32/70 (45%)
 Frame = +3

Query: 33  LHCARHLRIPTSLHCARHL*FWFSR*GHHSSHGLTILHAKHARAMDLILPLHALRFRYHT 212
           LH A+ +      +C   + +  S  GH+ S  + IL  K      + LPLH LR     
Sbjct: 217 LHGAQSVGCGHIQYCGSPMKYSVSESGHNKSLAMVILREKGEEPEVVRLPLHPLRDVIRK 276

Query: 213 RSSVKDRLRM 242
           R  +KD LR+
Sbjct: 277 RGKLKDILRV 286