BP915362 |
Clone id |
YMU001_000070_F05 |
Library |
YMU01 |
Length |
544 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000070_F05. |
Accession |
BP915362 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL548Contig1 |
Sequence |
GTCGCGTGTTTCGTACTACAAGAAGCTCGTCATCACACCTCTTGCCACAGGCAGATATAG GAATATTATGGACATGAATGCTGGCTTGGGTGGATTTGCAGCCGCTTTAGGTGTTGACAA AAGCTGGGTCATGAATGTAGTTCCGTATGATGCCAATACACTCGGTGTTATTTATGAAAG AGGGCTAATTGGAACATATCAGAACTGGTGTGAAGCTTTTTCGACATACCCAAGAACATA TGATCTCCTGCATGCAACTTCGCTGTTGAGCTTGTACCAAGACAGGTGCAACATGTCTGA CATCCTTCTGGAAATGGATCGCATCCTGCGTCCCGAGGGCGCAGTTCTGATGCGTGACAA TGTTGATGTACTAAATAAGGCAAGAAAGATAATGAGCAGCATGAGATGGGAAAGTAAACT GGTTGACCATGAGAATGGCCCGTTTGTGGAGGAGAAGATACTTGTAGCTGTGAAGAAATA TTGGGTGGACAATGGGGAGAGCGTGTCAAAAAATGAGACGAGTTCATAGTCTACTTATAA TCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O35930 |
Definition |
sp|O35930|GP1BA_MOUSE Platelet glycoprotein Ib alpha chain OS=Mus musculus |
Align length |
78 |
Score (bit) |
33.1 |
E-value |
0.89 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TML1 |
Definition |
tr|A9TML1|A9TML1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
Align length |
170 |
Score (bit) |
233.0 |
E-value |
5.0e-60 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915362|Adiantum capillus-veneris mRNA, clone: YMU001_000070_F05. (544 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TML1|A9TML1_PHYPA Predicted protein (Fragment) OS=Physcomit... 233 5e-60 tr|A9TI06|A9TI06_PHYPA Predicted protein OS=Physcomitrella paten... 230 3e-59 tr|A9S2L0|A9S2L0_PHYPA Predicted protein OS=Physcomitrella paten... 222 1e-56 tr|B8LMQ4|B8LMQ4_PICSI Putative uncharacterized protein OS=Picea... 220 3e-56 tr|A9TVL9|A9TVL9_PHYPA Predicted protein OS=Physcomitrella paten... 219 7e-56 tr|B7FM75|B7FM75_MEDTR Putative uncharacterized protein OS=Medic... 219 1e-55 tr|Q8S7P9|Q8S7P9_ORYSJ Putative uncharacterized protein OSJNBa00... 217 4e-55 tr|Q336Q2|Q336Q2_ORYSJ cDNA clone:J023121D12, full insert sequen... 217 4e-55 tr|Q0IVI1|Q0IVI1_ORYSJ Os10g0569300 protein (Fragment) OS=Oryza ... 217 4e-55 tr|A3C7H5|A3C7H5_ORYSJ Putative uncharacterized protein OS=Oryza... 217 4e-55 tr|A2ZAE7|A2ZAE7_ORYSI Putative uncharacterized protein OS=Oryza... 216 8e-55 tr|Q9ZPH9|Q9ZPH9_ARATH F15P23.1 protein (Putative uncharacterize... 214 2e-54 tr|Q52PK2|Q52PK2_WHEAT Dehydration-induced protein OS=Triticum a... 214 2e-54 tr|Q9SZX8|Q9SZX8_ARATH Putative uncharacterized protein AT4g1044... 213 5e-54 tr|A4UV20|A4UV20_SOLTU Putative methyltransferase OS=Solanum tub... 213 7e-54 tr|Q94GX1|Q94GX1_ORYSJ Os10g0510400 protein OS=Oryza sativa subs... 212 1e-53 tr|B8BHU3|B8BHU3_ORYSI Putative uncharacterized protein OS=Oryza... 212 1e-53 tr|A3C6E0|A3C6E0_ORYSJ Putative uncharacterized protein OS=Oryza... 212 1e-53 tr|Q94C19|Q94C19_ARATH At1g26850/T2P11_4 OS=Arabidopsis thaliana... 211 2e-53 tr|A4UV48|A4UV48_SOLTU Putative methyltransferase OS=Solanum tub... 211 2e-53 tr|A7QVJ2|A7QVJ2_VITVI Chromosome chr16 scaffold_189, whole geno... 210 3e-53 tr|A2Q5C6|A2Q5C6_MEDTR Generic methyltransferase OS=Medicago tru... 210 5e-53 tr|Q9M609|Q9M609_MALDO Putative uncharacterized protein OS=Malus... 208 2e-52 tr|A7QEE6|A7QEE6_VITVI Chromosome chr1 scaffold_84, whole genome... 208 2e-52 tr|B2D077|B2D077_NICBE Methyltransferase OS=Nicotiana benthamian... 207 3e-52 tr|B1PSM0|B1PSM0_NICBE Putative methyltransferase OS=Nicotiana b... 207 3e-52 tr|A2Z188|A2Z188_ORYSI Putative uncharacterized protein OS=Oryza... 207 4e-52 tr|B6T972|B6T972_MAIZE Ankyrin protein kinase-like OS=Zea mays P... 206 7e-52 tr|Q8W396|Q8W396_ORYSA Putative uncharacterized protein OSJNBa00... 205 1e-51 tr|Q6EQ17|Q6EQ17_ORYSJ Os09g0415700 protein OS=Oryza sativa subs... 205 1e-51
>tr|A9TML1|A9TML1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_147760 PE=4 SV=1 Length = 636
Score = 233 bits (594), Expect = 5e-60 Identities = 111/170 (65%), Positives = 131/170 (77%), Gaps = 2/170 (1%) Frame = +2
Query: 5 RVSYYKKLVITPLATGRYRNIMDMNXXXXXXXXXXXVDKSWVMNVVPYDA--NTLGVIYE 178 RVSYYK ++TPLA+GRYRNIMDMN D WVMNV+P D NTLGVIYE Sbjct: 463 RVSYYKTRLVTPLASGRYRNIMDMNAGLGGFAASLVKDPVWVMNVMPSDVKDNTLGVIYE 522
Query: 179 RGLIGTYQNWCEAFSTYPRTYDLLHATSLLSLYQDRCNMSDILLEMDRILRPEGAVLMRD 358 RGLIGTYQNWCEAFSTYPRTYDL+HA+ L S+YQDRC++ DILLEMDRILRPEGAV++RD Sbjct: 523 RGLIGTYQNWCEAFSTYPRTYDLIHASGLFSMYQDRCDIVDILLEMDRILRPEGAVIIRD 582
Query: 359 NVDVLNKARKIMSSMRWESKLVDHENGPFVEEKILVAVKKYWVDNGESVS 508 V+VLN+ I MRWE+++ DHE+GP V EKILV VK YWV + + + Sbjct: 583 EVEVLNRVMMISQGMRWETRMADHEDGPLVPEKILVGVKTYWVGSSANAT 632
>tr|A9TI06|A9TI06_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_195256 PE=4 SV=1 Length = 602
Score = 230 bits (587), Expect = 3e-59 Identities = 108/168 (64%), Positives = 129/168 (76%), Gaps = 2/168 (1%) Frame = +2
Query: 5 RVSYYKKLVITPLATGRYRNIMDMNXXXXXXXXXXXVDKSWVMNVVPYDA--NTLGVIYE 178 RV+YY +ITPL +GRYRNIMDMN WVMNV+P+DA NTLGVIYE Sbjct: 429 RVNYYTAHLITPLVSGRYRNIMDMNAGLGGFAAALVKYPVWVMNVMPFDAKLNTLGVIYE 488
Query: 179 RGLIGTYQNWCEAFSTYPRTYDLLHATSLLSLYQDRCNMSDILLEMDRILRPEGAVLMRD 358 RGLIGTYQNWCEAFSTYPRTYDL+HA+ + S+YQDRCN+ DILLEMDRILRPEGA+++RD Sbjct: 489 RGLIGTYQNWCEAFSTYPRTYDLIHASGVFSMYQDRCNIEDILLEMDRILRPEGAIIIRD 548
Query: 359 NVDVLNKARKIMSSMRWESKLVDHENGPFVEEKILVAVKKYWVDNGES 502 VDVLN I + MRWE+++ DHE+GP V EKIL+ VK YWV + + Sbjct: 549 EVDVLNNVMMISNGMRWETRIADHEDGPLVSEKILIGVKTYWVGSNSN 596
>tr|A9S2L0|A9S2L0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_208036 PE=4 SV=1 Length = 629
Score = 222 bits (565), Expect = 1e-56 Identities = 110/176 (62%), Positives = 128/176 (72%), Gaps = 2/176 (1%) Frame = +2
Query: 5 RVSYYKKLVITPLATGRYRNIMDMNXXXXXXXXXXXVDKSWVMNVVPYDA--NTLGVIYE 178 RV YYK +I PL GRYRNIMDMN D WVMN +P +A +TLGVI+E Sbjct: 451 RVKYYKNHLIPPLTNGRYRNIMDMNAGLGGFAAALVKDPVWVMNAMPPEAKTDTLGVIFE 510
Query: 179 RGLIGTYQNWCEAFSTYPRTYDLLHATSLLSLYQDRCNMSDILLEMDRILRPEGAVLMRD 358 RG IGTYQNWCEAFSTYPRTYDL+HA ++ S+YQDRC+++ +LLEMDRILRPEGAVL+RD Sbjct: 511 RGFIGTYQNWCEAFSTYPRTYDLIHADNVFSMYQDRCDITYVLLEMDRILRPEGAVLIRD 570
Query: 359 NVDVLNKARKIMSSMRWESKLVDHENGPFVEEKILVAVKKYWVDNGESVSKNETSS 526 VDV+NK I MRWE +L DHE GPF+ EKILV VK YWV GE + N T S Sbjct: 571 EVDVVNKVMIITQGMRWECRLADHEEGPFIREKILVCVKTYWV--GEIKAANATLS 624
>tr|B8LMQ4|B8LMQ4_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 626
Score = 220 bits (561), Expect = 3e-56 Identities = 108/162 (66%), Positives = 126/162 (77%), Gaps = 2/162 (1%) Frame = +2
Query: 5 RVSYYKKLVITPLATGRYRNIMDMNXXXXXXXXXXXVDKSWVMNVVPYDA--NTLGVIYE 178 RV+ YK+L I L GRYRNIMDMN D WVMNVVP DA NTLGVIYE Sbjct: 457 RVANYKRL-IGQLGQGRYRNIMDMNAGLGGFAAALANDPVWVMNVVPSDAKHNTLGVIYE 515
Query: 179 RGLIGTYQNWCEAFSTYPRTYDLLHATSLLSLYQDRCNMSDILLEMDRILRPEGAVLMRD 358 RG IGTYQ+WCEAFSTYPRTYDL+HA+ LLS+YQDRC +SDILLEMDRILRPEG V+ RD Sbjct: 516 RGFIGTYQDWCEAFSTYPRTYDLIHASGLLSMYQDRCEISDILLEMDRILRPEGTVIFRD 575
Query: 359 NVDVLNKARKIMSSMRWESKLVDHENGPFVEEKILVAVKKYW 484 VDVL K ++ MRW+S+++DHE+GPF +EKIL+AVK+YW Sbjct: 576 TVDVLVKVENLIGGMRWQSQMMDHESGPFNQEKILIAVKQYW 617
>tr|A9TVL9|A9TVL9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_97869 PE=4 SV=1 Length = 629
Score = 219 bits (558), Expect = 7e-56 Identities = 107/176 (60%), Positives = 129/176 (73%), Gaps = 2/176 (1%) Frame = +2
Query: 5 RVSYYKKLVITPLATGRYRNIMDMNXXXXXXXXXXXVDKSWVMNVVPYDA--NTLGVIYE 178 R+ YYK +I PL GRYRNIMDMN + WVMN +P +A +TLGVI+E Sbjct: 451 RIKYYKTHLIPPLTNGRYRNIMDMNAGLGGFAAALVKEPVWVMNAMPPEAKVDTLGVIFE 510
Query: 179 RGLIGTYQNWCEAFSTYPRTYDLLHATSLLSLYQDRCNMSDILLEMDRILRPEGAVLMRD 358 RG IGTYQNWCEAFSTYPRTYDL+HA + S+YQDRC++ +LLEMDRILRPEGAVL+RD Sbjct: 511 RGFIGTYQNWCEAFSTYPRTYDLIHADKVFSMYQDRCDIVYVLLEMDRILRPEGAVLIRD 570
Query: 359 NVDVLNKARKIMSSMRWESKLVDHENGPFVEEKILVAVKKYWVDNGESVSKNETSS 526 V+++NK I MRWE +L DHE+GPFV+EKILV VK YWV GE + N T+S Sbjct: 571 EVEIVNKVMVITQGMRWECRLADHEDGPFVKEKILVCVKNYWV--GEIKAANTTAS 624
>tr|B7FM75|B7FM75_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 610
Score = 219 bits (557), Expect = 1e-55 Identities = 109/169 (64%), Positives = 127/169 (75%), Gaps = 2/169 (1%) Frame = +2
Query: 8 VSYYKKLVITPLATGRYRNIMDMNXXXXXXXXXXXVDKSWVMNVVPYDA--NTLGVIYER 181 V+ YKK + + L +GRYRNIMDMN KSWVMNVVP A +TLGVIYER Sbjct: 441 VNAYKK-INSLLDSGRYRNIMDMNAGLGSFAAAIHSSKSWVMNVVPTIAEKSTLGVIYER 499
Query: 182 GLIGTYQNWCEAFSTYPRTYDLLHATSLLSLYQDRCNMSDILLEMDRILRPEGAVLMRDN 361 GLIG Y +WCE FSTYPRTYDL+HA L SLYQD+CN DILLEMDRILRPEGAV++RD Sbjct: 500 GLIGIYHDWCEGFSTYPRTYDLIHANGLFSLYQDKCNTEDILLEMDRILRPEGAVIIRDE 559
Query: 362 VDVLNKARKIMSSMRWESKLVDHENGPFVEEKILVAVKKYWVDNGESVS 508 VDVL K +K++ MRW KLVDHE+GP V EK+L+AVK+YWV +G S S Sbjct: 560 VDVLIKVKKLIGGMRWNMKLVDHEDGPLVPEKVLIAVKQYWVTDGNSTS 608
>tr|Q8S7P9|Q8S7P9_ORYSJ Putative uncharacterized protein OSJNBa0095C07.16 OS=Oryza sativa subsp. japonica GN=OSJNBa0095C07.16 PE=4 SV=1 Length = 686
Score = 217 bits (552), Expect = 4e-55 Identities = 108/169 (63%), Positives = 128/169 (75%), Gaps = 2/169 (1%) Frame = +2
Query: 8 VSYYKKLVITPLATGRYRNIMDMNXXXXXXXXXXXVDKSWVMNVVPY--DANTLGVIYER 181 VS YK+ + + + RYRNIMDMN SWVMNVVP + NTLG+IYER Sbjct: 518 VSTYKR-INKLIGSLRYRNIMDMNAGLGSFAAIIDSPISWVMNVVPTISEKNTLGIIYER 576
Query: 182 GLIGTYQNWCEAFSTYPRTYDLLHATSLLSLYQDRCNMSDILLEMDRILRPEGAVLMRDN 361 GLIG Y +WCEAFSTYPRTYDL+HA L SLYQ++CNM DILLEMDRILRPEGAV++RDN Sbjct: 577 GLIGIYHDWCEAFSTYPRTYDLIHANGLFSLYQNKCNMEDILLEMDRILRPEGAVILRDN 636
Query: 362 VDVLNKARKIMSSMRWESKLVDHENGPFVEEKILVAVKKYWVDNGESVS 508 V+VLNK R+ + MRW+SKL+DHE+GP + EKILV+VKKYWV N E S Sbjct: 637 VEVLNKVRRTVMGMRWKSKLLDHEDGPHIPEKILVSVKKYWVGNEEENS 685
>tr|Q336Q2|Q336Q2_ORYSJ cDNA clone:J023121D12, full insert sequence OS=Oryza sativa subsp. japonica GN=LOC_Os10g41970 PE=2 SV=1 Length = 605
Score = 217 bits (552), Expect = 4e-55 Identities = 108/169 (63%), Positives = 128/169 (75%), Gaps = 2/169 (1%) Frame = +2
Query: 8 VSYYKKLVITPLATGRYRNIMDMNXXXXXXXXXXXVDKSWVMNVVPY--DANTLGVIYER 181 VS YK+ + + + RYRNIMDMN SWVMNVVP + NTLG+IYER Sbjct: 437 VSTYKR-INKLIGSLRYRNIMDMNAGLGSFAAIIDSPISWVMNVVPTISEKNTLGIIYER 495
Query: 182 GLIGTYQNWCEAFSTYPRTYDLLHATSLLSLYQDRCNMSDILLEMDRILRPEGAVLMRDN 361 GLIG Y +WCEAFSTYPRTYDL+HA L SLYQ++CNM DILLEMDRILRPEGAV++RDN Sbjct: 496 GLIGIYHDWCEAFSTYPRTYDLIHANGLFSLYQNKCNMEDILLEMDRILRPEGAVILRDN 555
Query: 362 VDVLNKARKIMSSMRWESKLVDHENGPFVEEKILVAVKKYWVDNGESVS 508 V+VLNK R+ + MRW+SKL+DHE+GP + EKILV+VKKYWV N E S Sbjct: 556 VEVLNKVRRTVMGMRWKSKLLDHEDGPHIPEKILVSVKKYWVGNEEENS 604
>tr|Q0IVI1|Q0IVI1_ORYSJ Os10g0569300 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os10g0569300 PE=4 SV=1 Length = 637
Score = 217 bits (552), Expect = 4e-55 Identities = 108/169 (63%), Positives = 128/169 (75%), Gaps = 2/169 (1%) Frame = +2
Query: 8 VSYYKKLVITPLATGRYRNIMDMNXXXXXXXXXXXVDKSWVMNVVPY--DANTLGVIYER 181 VS YK+ + + + RYRNIMDMN SWVMNVVP + NTLG+IYER Sbjct: 469 VSTYKR-INKLIGSLRYRNIMDMNAGLGSFAAIIDSPISWVMNVVPTISEKNTLGIIYER 527
Query: 182 GLIGTYQNWCEAFSTYPRTYDLLHATSLLSLYQDRCNMSDILLEMDRILRPEGAVLMRDN 361 GLIG Y +WCEAFSTYPRTYDL+HA L SLYQ++CNM DILLEMDRILRPEGAV++RDN Sbjct: 528 GLIGIYHDWCEAFSTYPRTYDLIHANGLFSLYQNKCNMEDILLEMDRILRPEGAVILRDN 587
Query: 362 VDVLNKARKIMSSMRWESKLVDHENGPFVEEKILVAVKKYWVDNGESVS 508 V+VLNK R+ + MRW+SKL+DHE+GP + EKILV+VKKYWV N E S Sbjct: 588 VEVLNKVRRTVMGMRWKSKLLDHEDGPHIPEKILVSVKKYWVGNEEENS 636
>tr|A3C7H5|A3C7H5_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_031247 PE=4 SV=1 Length = 589
Score = 217 bits (552), Expect = 4e-55 Identities = 108/169 (63%), Positives = 128/169 (75%), Gaps = 2/169 (1%) Frame = +2
Query: 8 VSYYKKLVITPLATGRYRNIMDMNXXXXXXXXXXXVDKSWVMNVVPY--DANTLGVIYER 181 VS YK+ + + + RYRNIMDMN SWVMNVVP + NTLG+IYER Sbjct: 421 VSTYKR-INKLIGSLRYRNIMDMNAGLGSFAAIIDSPISWVMNVVPTISEKNTLGIIYER 479
Query: 182 GLIGTYQNWCEAFSTYPRTYDLLHATSLLSLYQDRCNMSDILLEMDRILRPEGAVLMRDN 361 GLIG Y +WCEAFSTYPRTYDL+HA L SLYQ++CNM DILLEMDRILRPEGAV++RDN Sbjct: 480 GLIGIYHDWCEAFSTYPRTYDLIHANGLFSLYQNKCNMEDILLEMDRILRPEGAVILRDN 539
Query: 362 VDVLNKARKIMSSMRWESKLVDHENGPFVEEKILVAVKKYWVDNGESVS 508 V+VLNK R+ + MRW+SKL+DHE+GP + EKILV+VKKYWV N E S Sbjct: 540 VEVLNKVRRTVMGMRWKSKLLDHEDGPHIPEKILVSVKKYWVGNEEENS 588
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