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NBDC - LSDB Archive
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BP915363
Clone id YMU001_000070_F06
Library
Length 530
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGTTGCATCATCTGATTGAGCGAACATTTCCTCATTGTCCTCTGAACAGTTAGCACTCT
GCACATACGTCGTATCATTCTGCTGAAGATCAACCTTCTGTAGCTCCCTTGTCCTTAACC
ACCCAGAAACCTCAGCTGCCTTGGGCGGCGGTTTAACTGGAGAGAGCAAGAACAAAGCCG
TCCCATCATTACAAAAATGTGAAGGTAAAATTGCAGCATCATTTTCCACACATGGAGCCC
ATGCAGTCTCGGACAAATAAACGCTCGAGAGACATGCCCCTCTTATATCTCTTCCAAACT
GAAAAGAAGGTAAATTATCCACTCCCTTGGAACATACTTTAAACAGCATGCCAGCCATCA
CGGTTGGCTGATTGGGCAGGTCTTCTGCATTCCCATAAAATACCTCTCCGTGGTTAGCTG
AAGGTAAGTTGTAGTTTTGAAAAGTGGTCGACAGATGCTCTGCCGTTGGTGGCTTCTTCC
AGAAAGCCAAGTTATTTGAGGCTACTTTGGACTTAACCACGTCAGGACAC
■■Homology search results ■■ -
sp_hit_id Q61493
Definition sp|Q61493|DPOLZ_MOUSE DNA polymerase zeta catalytic subunit OS=Mus musculus
Align length 131
Score (bit) 41.2
E-value 0.003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915363|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_F06.
         (530 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q61493|DPOLZ_MOUSE DNA polymerase zeta catalytic subunit OS=M...    41   0.003
sp|O60673|DPOLZ_HUMAN DNA polymerase zeta catalytic subunit OS=H...    38   0.026
sp|P14284|DPOZ_YEAST DNA polymerase zeta catalytic subunit OS=Sa...    33   0.85 
sp|A5UMW9|PURL_METS3 Phosphoribosylformylglycinamidine synthase ...    31   4.2  
sp|Q8JZX3|WD51A_MOUSE WD repeat-containing protein 51A OS=Mus mu...    30   7.2  
sp|Q9P376|FCP1_SCHPO RNA polymerase II subunit A C-terminal doma...    30   7.2  

>sp|Q61493|DPOLZ_MOUSE DNA polymerase zeta catalytic subunit OS=Mus
            musculus GN=Rev3l PE=2 SV=2
          Length = 3122

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 31/131 (23%), Positives = 54/131 (41%), Gaps = 8/131 (6%)
 Frame = -2

Query: 472  PPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNLPSFQFG 293
            PP+ E +  T  +++L  A + E F  N  D+P +P  + G L  V ++  ++L  F+  
Sbjct: 1881 PPSREEIVATLLDHDLSEAIYQEPFCSNPSDVPEKPREIGGRLLMVETRLPNDLIEFEGD 1940

Query: 292  RDIRGACLSSVYLSETAWAP----CVENDAAILPSHFCNDGTAL----FLLSPVKPPPKA 137
              + G  L     S     P     + N  A++     N    +     ++ P K  P  
Sbjct: 1941 FSLEGLRLWKTAFSAMTQNPRPGSPLRNGQAVVNKESSNSHKMVEDKKIVIMPCKYAPSR 2000

Query: 136  AEVSGWLRTRE 104
              V  WL+ +E
Sbjct: 2001 QLVQAWLQAKE 2011


>sp|O60673|DPOLZ_HUMAN DNA polymerase zeta catalytic subunit OS=Homo
            sapiens GN=REV3L PE=1 SV=2
          Length = 3130

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 13/136 (9%)
 Frame = -2

Query: 472  PPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNLPSFQFG 293
            PP+ E +  T  +++L    + E F  N  D+P +P  + G L  V ++  ++L  F+  
Sbjct: 1884 PPSREEIMATLLDHDLSETIYQEPFCSNPSDVPEKPREIGGRLLMVETRLANDLAEFEGD 1943

Query: 292  RDIRGACLSSVYLSETAWAPCVENDAAILP----SHFCNDGTA---------LFLLSPVK 152
              + G     + L +TA++   +N     P        N G++           ++ P K
Sbjct: 1944 FSLEG-----LRLWKTAFSAMTQNPRPGSPLRSGQGVVNKGSSNSPKMVEDKKIVIMPCK 1998

Query: 151  PPPKAAEVSGWLRTRE 104
              P    V  WL+ +E
Sbjct: 1999 CAPSRQLVQVWLQAKE 2014


>sp|P14284|DPOZ_YEAST DNA polymerase zeta catalytic subunit
           OS=Saccharomyces cerevisiae GN=REV3 PE=1 SV=1
          Length = 1504

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
 Frame = -2

Query: 514 KSKVASNNLAFWKK------PPTA-EHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVM 356
           + KV +  L + K+      PP   + +    ++   P  ++ + F+ N  DL N+P   
Sbjct: 506 RKKVMAAGLRYGKRAFVYGEPPFGYQDILNKLEDEGFPKIDYKDPFFSNPVDLENKPYAY 565

Query: 355 AGMLFKVCSKGVDNLPSFQFG 293
           AG  F++ S  V      QFG
Sbjct: 566 AGKRFEISSTHVSTRIPVQFG 586


>sp|A5UMW9|PURL_METS3 Phosphoribosylformylglycinamidine synthase 2
           OS=Methanobrevibacter smithii (strain PS / ATCC 35061 /
           DSM 861) GN=purL PE=3 SV=1
          Length = 716

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 16/61 (26%), Positives = 28/61 (45%)
 Frame = -2

Query: 481 WKKPPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNLPSF 302
           W+   T E +S   +N+N P  +    FY   E +   PT   G++      GV+N+ + 
Sbjct: 488 WQFKRTIEGMSLVAENFNAPVISGNVSFYNETEGIKINPTPAVGVI------GVENIENI 541

Query: 301 Q 299
           +
Sbjct: 542 R 542


>sp|Q8JZX3|WD51A_MOUSE WD repeat-containing protein 51A OS=Mus
           musculus GN=Wdr51a PE=2 SV=2
          Length = 405

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 8/88 (9%)
 Frame = -2

Query: 241 WAPCVENDAAILPSH--------FCNDGTALFLLSPVKPPPKAAEVSGWLRTRELQKVDL 86
           W P V+ ++ +  +H        FC+DG +L   S  K       V  W   R+     L
Sbjct: 88  WVPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDK------TVKVWSTHRQRFLFSL 141

Query: 85  QQNDTTYVQSANCSEDNEEMFAQSDDAT 2
            Q+   +V+ A  S D   + + SDD T
Sbjct: 142 TQH-INWVRCAKFSPDGRLIVSASDDKT 168


>sp|Q9P376|FCP1_SCHPO RNA polymerase II subunit A C-terminal domain
           phosphatase OS=Schizosaccharomyces pombe GN=fcp1 PE=1
           SV=1
          Length = 723

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = -2

Query: 520 VVKSKVASNNLAFWKKPPTAEHLSTTFQNYNLPSANHGEVFYGNAED 380
           VVK    + +L+ WK+ P +++L   + +Y+LP  N  E  Y ++ D
Sbjct: 556 VVKLNWLTESLSQWKRLPESDYL--LYPSYDLPDRNLSEHSYSSSSD 600
tr_hit_id A7EFB8
Definition tr|A7EFB8|A7EFB8_SCLS1 DNA polymerase OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1)
Align length 177
Score (bit) 63.5
E-value 6.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915363|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_F06.
         (530 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7EFB8|A7EFB8_SCLS1 DNA polymerase OS=Sclerotinia sclerotioru...    64   6e-09
tr|A6SQK2|A6SQK2_BOTFB DNA polymerase OS=Botryotinia fuckeliana ...    55   2e-06
tr|Q2KFC1|Q2KFC1_MAGGR DNA polymerase OS=Magnaporthe grisea 70-1...    54   4e-06
tr|A4RB72|A4RB72_MAGGR DNA polymerase OS=Magnaporthe grisea GN=M...    54   4e-06
tr|Q2H423|Q2H423_CHAGB DNA polymerase OS=Chaetomium globosum GN=...    49   2e-04
tr|B2ABH1|B2ABH1_PODAN Predicted CDS Pa_1_20650 OS=Podospora ans...    49   2e-04
tr|Q2L7B3|Q2L7B3_NEUCR REV3 (Fragment) OS=Neurospora crassa GN=u...    45   0.003
tr|Q27RS4|Q27RS4_NEUCR DNA polymerase OS=Neurospora crassa GN=up...    45   0.003
tr|Q27RS3|Q27RS3_NEUCR DNA polymerase OS=Neurospora crassa GN=up...    45   0.003
tr|Q4FH88|Q4FH88_NEUCR DNA polymerase OS=Neurospora crassa GN=up...    44   0.005
tr|Q2L7B9|Q2L7B9_NEUCR REV3 (Fragment) OS=Neurospora crassa GN=u...    44   0.005
tr|Q27Q97|Q27Q97_NEUCR DNA polymerase (Fragment) OS=Neurospora c...    44   0.005
tr|B2WA95|B2WA95_PYRTR DNA polymerase zeta catalytic subunit OS=...    44   0.005
tr|Q2L7B6|Q2L7B6_NEUCR REV3 (Fragment) OS=Neurospora crassa GN=u...    43   0.009
tr|Q27RS2|Q27RS2_NEUCR DNA polymerase OS=Neurospora crassa GN=up...    43   0.009
tr|Q309F8|Q309F8_NEUTT DNA polymerase OS=Neurospora tetrasperma ...    43   0.011
tr|Q309F7|Q309F7_NEUTT DNA polymerase OS=Neurospora tetrasperma ...    43   0.011
tr|A8N1H4|A8N1H4_COPC7 DNA polymerase OS=Coprinopsis cinerea (st...    43   0.011
tr|A1D832|A1D832_NEOFI DNA polymerase OS=Neosartorya fischeri (s...    42   0.019
tr|Q2L7B5|Q2L7B5_NEUCR REV3 (Fragment) OS=Neurospora crassa GN=u...    42   0.025
tr|Q2L7B4|Q2L7B4_NEUCR REV3 (Fragment) OS=Neurospora crassa GN=u...    42   0.025
tr|Q27RS6|Q27RS6_NEUCR DNA polymerase OS=Neurospora crassa GN=up...    42   0.025
tr|Q27RS5|Q27RS5_NEUCR DNA polymerase OS=Neurospora crassa GN=up...    42   0.025
tr|B6QT88|B6QT88_PENMA DNA polymerase zeta catalytic subunit, pu...    41   0.043
tr|Q2L7B8|Q2L7B8_NEUCR REV3 (Fragment) OS=Neurospora crassa GN=u...    40   0.056
tr|Q27RS7|Q27RS7_NEUCR DNA polymerase OS=Neurospora crassa GN=up...    40   0.056
tr|Q5A4E5|Q5A4E5_CANAL DNA polymerase OS=Candida albicans GN=REV...    40   0.074
tr|Q8X1U8|Q8X1U8_NEUCR DNA polymerase OS=Neurospora crassa GN=UP...    40   0.096
tr|Q2U4J3|Q2U4J3_ASPOR DNA polymerase OS=Aspergillus oryzae GN=A...    39   0.13 
tr|Q2L7B7|Q2L7B7_NEUCR REV3 (Fragment) OS=Neurospora crassa GN=u...    39   0.13 

>tr|A7EFB8|A7EFB8_SCLS1 DNA polymerase OS=Sclerotinia sclerotiorum
           (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_04009 PE=3
           SV=1
          Length = 1430

 Score = 63.5 bits (153), Expect = 6e-09
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
 Frame = -2

Query: 523 DVVKSKVASNNLAFWKKPPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGML 344
           D  + ++ S  LA  + PP+A+++S+T  N+N+P+  + + FY N ED+P +P   AG  
Sbjct: 437 DEFEGRIGSLVLAHQQPPPSAQYISSTMSNFNIPTVLYQDAFYSNEEDVPERPREWAGRE 496

Query: 343 FKVCSKGVDNLPSFQFGRDIRGAC-LSSVYLSETAWAPCVENDAAILPSHFCNDGTALFL 167
           FK+ S  +  LP F           L SV LS+         D  I   H      +L +
Sbjct: 497 FKLGSTSLPFLPDFDPSATSDATFGLRSVVLSDKT------KDEEIY--HHRRRECSLRV 548

Query: 166 LSPVKPPPKAAEVSGWLRTRELQKVDLQQ--NDTTYVQSANCSEDNEEMFAQSDDAT 2
            +  + PP  A+V  W R   L++ +  +   + T  +S+  +   E   +Q D  T
Sbjct: 549 WTFAETPPTYADVHCWARNETLRQGNKSEKSKEGTTSKSSVSNRRKEAKLSQIDGPT 605


>tr|A6SQK2|A6SQK2_BOTFB DNA polymerase OS=Botryotinia fuckeliana
           (strain B05.10) GN=BC1G_15151 PE=3 SV=1
          Length = 1710

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 27/63 (42%), Positives = 35/63 (55%)
 Frame = -2

Query: 490 LAFWKKPPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNL 311
           LA  + PP+A  + TT  N+NLP   H + FY   ED+P +P   AG  FK+ S  V  L
Sbjct: 681 LAHHQSPPSAHSVFTTMSNFNLPLILHQDAFYSREEDVPERPREWAGREFKLGSTSVPFL 740

Query: 310 PSF 302
           P F
Sbjct: 741 PDF 743


>tr|Q2KFC1|Q2KFC1_MAGGR DNA polymerase OS=Magnaporthe grisea 70-15
            GN=MGCH7_ch7g765 PE=3 SV=1
          Length = 1736

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 4/161 (2%)
 Frame = -2

Query: 472  PPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNLPSFQFG 293
            PPTAE +  T  +Y +P   + + +Y   +D+P +P   AG  F++    +  LP F   
Sbjct: 692  PPTAEEVCATMADYGIPDVVYRDAYYSKEKDVPLRPREFAGRQFRLRGNTLPYLPEFTAD 751

Query: 292  RDIRGACLSSVYLSETAW----APCVENDAAILPSHFCNDGTALFLLSPVKPPPKAAEVS 125
            R            +  AW    A   +     +      +   +      +PPP   EVS
Sbjct: 752  R-----------AAPDAWAVPEARLPDKSKLKIEEEIRRNKCTIKTWEIAQPPPTFEEVS 800

Query: 124  GWLRTRELQKVDLQQNDTTYVQSANCSEDNEEMFAQSDDAT 2
            GW   +E++K +      ++  S   ++      +Q + AT
Sbjct: 801  GWWEEKEIKKKESGSRPKSHPASPQSTQLARRQLSQIEGAT 841


>tr|A4RB72|A4RB72_MAGGR DNA polymerase OS=Magnaporthe grisea
            GN=MGG_02986 PE=3 SV=1
          Length = 1715

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 4/161 (2%)
 Frame = -2

Query: 472  PPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNLPSFQFG 293
            PPTAE +  T  +Y +P   + + +Y   +D+P +P   AG  F++    +  LP F   
Sbjct: 692  PPTAEEVCATMADYGIPDVVYRDAYYSKEKDVPLRPREFAGRQFRLRGNTLPYLPEFTAD 751

Query: 292  RDIRGACLSSVYLSETAW----APCVENDAAILPSHFCNDGTALFLLSPVKPPPKAAEVS 125
            R            +  AW    A   +     +      +   +      +PPP   EVS
Sbjct: 752  R-----------AAPDAWAVPEARLPDKSKLKIEEEIRRNKCTIKTWEIAQPPPTFEEVS 800

Query: 124  GWLRTRELQKVDLQQNDTTYVQSANCSEDNEEMFAQSDDAT 2
            GW   +E++K +      ++  S   ++      +Q + AT
Sbjct: 801  GWWEEKEIKKKESGSRPKSHPASPQSTQLARRQLSQIEGAT 841


>tr|Q2H423|Q2H423_CHAGB DNA polymerase OS=Chaetomium globosum
            GN=CHGG_06592 PE=3 SV=1
          Length = 1755

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
 Frame = -2

Query: 475  KPPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNLPSFQF 296
            +PP+   + +T Q+Y LP   + + FY   +D+P +P   AG  +++    +  LP F  
Sbjct: 701  RPPSVAEVCSTMQSYGLPDVIYQDAFYSKDDDVPPRPREYAGREYRLDGNTLPYLPDF-- 758

Query: 295  GRDIRGACLSSVYLSETAWAPCVENDAAILPSHFCNDGTALFLLS--PVKPPPKAAEVSG 122
              D  G   ++  +      P +  D A +   +    +   L S    +PPP  AEVSG
Sbjct: 759  --DPTGQSPATFGVK-----PDLAPDLAEMELRYEKQQSLCTLRSWEIAEPPPTFAEVSG 811

Query: 121  WLRTRE 104
            W   +E
Sbjct: 812  WWEEKE 817


>tr|B2ABH1|B2ABH1_PODAN Predicted CDS Pa_1_20650 OS=Podospora anserina
            PE=4 SV=1
          Length = 1751

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
 Frame = -2

Query: 475  KPPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNLPSFQF 296
            +PPTA+ + +T Q Y LP   + + FY   ED+P +P   AG  +++ S  +  LP F  
Sbjct: 699  QPPTAQEVLSTMQTYGLPDVIYRDAFYSQDEDVPRRPREYAGKEYRLGSDTLPYLPDF-- 756

Query: 295  GRDIRGACLSSVYLSETAWAPCVENDAAILPSHFCNDGTALFLLS--PVKPPPKAAEVSG 122
              D +G   ++  +      P    D A L   +     A  L +     PPP   EVS 
Sbjct: 757  --DPKGESPATYGIK-----PEQGPDLAALELSYKEQRMACTLRTWEIATPPPAFQEVSQ 809

Query: 121  W 119
            W
Sbjct: 810  W 810


>tr|Q2L7B3|Q2L7B3_NEUCR REV3 (Fragment) OS=Neurospora crassa
           GN=upr-1 PE=4 SV=1
          Length = 610

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
 Frame = -2

Query: 478 KKPPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNLPSFQ 299
           KKPP+   +  T Q + LP   + + +Y   ED+P++P   AG  +++    V  LP F 
Sbjct: 384 KKPPSLSEVRCTMQVHGLPDVIYQDAYYSKDEDVPSRPREYAGREYRLDGSSVPWLPDF- 442

Query: 298 FGRDIRGACLSSVYLSETAWA--PCVENDAAILPSHFCNDGTALFLLSPVKPPPKAAEVS 125
              D  G   ++     T+ A  P +E   AI  +    +  A+       PPP   EVS
Sbjct: 443 ---DPTGTSSATYGEKPTSGADWPMLE---AIYEAQ--QEECAMRGWEIADPPPSFKEVS 494

Query: 124 GW 119
            W
Sbjct: 495 NW 496


>tr|Q27RS4|Q27RS4_NEUCR DNA polymerase OS=Neurospora crassa GN=upr-1
            PE=3 SV=1
          Length = 1926

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
 Frame = -2

Query: 478  KKPPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNLPSFQ 299
            KKPP+   +  T Q + LP   + + +Y   ED+P++P   AG  +++    V  LP F 
Sbjct: 761  KKPPSLSEVRCTMQVHGLPDVIYQDAYYSKDEDVPSRPREYAGREYRLDGSSVPWLPDF- 819

Query: 298  FGRDIRGACLSSVYLSETAWA--PCVENDAAILPSHFCNDGTALFLLSPVKPPPKAAEVS 125
               D  G   ++     T+ A  P +E   AI  +    +  A+       PPP   EVS
Sbjct: 820  ---DPTGTSSATYGEKPTSGADWPMLE---AIYEAQ--QEECAMRGWEIADPPPSFKEVS 871

Query: 124  GW 119
             W
Sbjct: 872  NW 873


>tr|Q27RS3|Q27RS3_NEUCR DNA polymerase OS=Neurospora crassa GN=upr-1
            PE=3 SV=1
          Length = 1926

 Score = 44.7 bits (104), Expect = 0.003
 Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
 Frame = -2

Query: 478  KKPPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNLPSFQ 299
            KKPP+   +  T Q + LP   + + +Y   ED+P++P   AG  +++    V  LP F 
Sbjct: 761  KKPPSLSEVRCTMQVHGLPDVIYQDAYYSKDEDVPSRPREYAGREYRLDGSSVPWLPDF- 819

Query: 298  FGRDIRGACLSSVYLSETAWA--PCVENDAAILPSHFCNDGTALFLLSPVKPPPKAAEVS 125
               D  G   ++     T+ A  P +E   AI  +    +  A+       PPP   EVS
Sbjct: 820  ---DPTGTSSATYGEKPTSGADWPMLE---AIYEAQ--QEECAMRGWEIADPPPSFKEVS 871

Query: 124  GW 119
             W
Sbjct: 872  NW 873


>tr|Q4FH88|Q4FH88_NEUCR DNA polymerase OS=Neurospora crassa GN=upr-1
            PE=3 SV=1
          Length = 1926

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
 Frame = -2

Query: 475  KPPTAEHLSTTFQNYNLPSANHGEVFYGNAEDLPNQPTVMAGMLFKVCSKGVDNLPSFQF 296
            KPP+   +S T Q + LP   + + +Y   ED+P++P   AG  +++    V  LP F  
Sbjct: 762  KPPSLSEVSGTMQVHGLPDVIYQDAYYSKDEDVPSRPREYAGREYRLDGSSVPWLPDF-- 819

Query: 295  GRDIRGACLSSVYLSETAWA--PCVENDAAILPSHFCNDGTALFLLSPVKPPPKAAEVSG 122
              D  G   ++     T+ A  P +E   AI  +    +  A+       PPP   EVS 
Sbjct: 820  --DPTGTSSATYGEKPTSGADWPMLE---AIYEAQ--QEECAMRGWEIADPPPSFKEVSD 872

Query: 121  W 119
            W
Sbjct: 873  W 873