BP915365
Clone id YMU001_000070_F08
Library
Length 136
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ACTGTGTGAAGTCGATAGGGATAGCCCTGCAGAAGATACACGATGTGGACTTCATGTACA
AATGTATGTGTTTATGCACATACTTAATGTGGAATTGCTGCAGGTCTCTGCTGCAATGGT
AGCCGATGAGGGGATG
■■Homology search results ■■ -
sp_hit_id Q54F08
Definition sp|Q54F08|TSPE_DICDI Probable tetraspanin tspE OS=Dictyostelium discoideum
Align length 31
Score (bit) 29.6
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915365|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_F08.
(136 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q54F08|TSPE_DICDI Probable tetraspanin tspE OS=Dictyostelium ... 30 4.8

>sp|Q54F08|TSPE_DICDI Probable tetraspanin tspE OS=Dictyostelium
discoideum GN=tspE PE=3 SV=1
Length = 231

Score = 29.6 bits (65), Expect = 4.8
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2

Query: 41 RCGLHVQMYVFMHILNVELLQVSAAMVADEG 133
+ GLH+ VF+ +L V L+ VSA M+ D G
Sbjct: 83 KLGLHLTFMVFLVVLIVCLVGVSAKMIVDSG 113


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915365|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_F08.
(136 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******