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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915368
Clone id YMU001_000070_F11
Library
Length 302
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCCGCAGGCTGAGGGTGGCTTGGGGATTATTGATCCAGAGATGCAGAGTTGTGCCTTACT
TTCTAAGCTCATTGTTCTTGGTTTGTTCCGGGGCAATGAGCCTTGGAAAGTCTTTCTGCA
TTGTAATGTGTTCCACATGATCCCCAGATATGGTGCGCTGGATGCAGGTAGTTGGTGCCA
TACTTGTCTGCTATATCTCCACAGATGCTCCCTTGTGTTTTTCTTGTTGTTCACCCCTTA
TTTGTCATTTCTGGTGGATATAGTTTATCCACAGATGCTCCCTGGTGTTTTTCTCATTGT
TC
■■Homology search results ■■ -
sp_hit_id Q32LI2
Definition sp|Q32LI2|TRYX3_BOVIN Probable inactive trypsin-X3 OS=Bos taurus
Align length 25
Score (bit) 31.2
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915368|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_F11.
         (302 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q32LI2|TRYX3_BOVIN Probable inactive trypsin-X3 OS=Bos taurus...    31   1.7  
sp|Q8BW11|TRYX3_MOUSE Putative trypsin-X3 OS=Mus musculus GN=Try...    30   2.9  
sp|Q8IYP2|TRYX3_HUMAN Trypsin-X3 OS=Homo sapiens GN=TRYX3 PE=2 SV=1    30   2.9  
sp|Q89AI1|MVIN_BUCBP Virulence factor mviN homolog OS=Buchnera a...    30   2.9  
sp|Q6IE06|TRYX3_RAT Putative trypsin-X3 OS=Rattus norvegicus GN=...    30   3.8  
sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1...    29   6.4  
sp|Q6DGZ0|CCD75_DANRE Coiled-coil domain-containing protein 75 O...    29   6.4  
sp|Q8QHL3|VGFR1_CHICK Vascular endothelial growth factor recepto...    29   8.4  
sp|P43071|CDR1_CANAL Multidrug resistance protein CDR1 OS=Candid...    29   8.4  
sp|Q5T8D3|ACBD5_HUMAN Acyl-CoA-binding domain-containing protein...    29   8.4  

>sp|Q32LI2|TRYX3_BOVIN Probable inactive trypsin-X3 OS=Bos taurus
           GN=TRYX3 PE=2 SV=1
          Length = 242

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 178 PYLSAISPQMLPCVFLVVHPLFVIS 252
           PYL  +    LPCV +++HPL+VI+
Sbjct: 29  PYLIYLKSDYLPCVGVLIHPLWVIT 53


>sp|Q8BW11|TRYX3_MOUSE Putative trypsin-X3 OS=Mus musculus GN=Tryx3
           PE=2 SV=1
          Length = 241

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 178 PYLSAISPQMLPCVFLVVHPLFVISGGY 261
           PYL  +    LPC  +++HPL+VI+  +
Sbjct: 29  PYLVYLKSDYLPCTGVLIHPLWVITAAH 56


>sp|Q8IYP2|TRYX3_HUMAN Trypsin-X3 OS=Homo sapiens GN=TRYX3 PE=2 SV=1
          Length = 241

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 178 PYLSAISPQMLPCVFLVVHPLFVISGGY 261
           PYL  +    LPC  +++HPL+VI+  +
Sbjct: 29  PYLVYLKSDYLPCAGVLIHPLWVITAAH 56


>sp|Q89AI1|MVIN_BUCBP Virulence factor mviN homolog OS=Buchnera
           aphidicola subsp. Baizongia pistaciae GN=mviN PE=3 SV=1
          Length = 513

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +2

Query: 155 ALDAGSWCHTCLLYLHRCSLVFFLLFTPYLSFLVDIVYPQMLPGVFLIV 301
           A+   SW +  LLY   C   FF+  T +L FL+ I    M+  + L +
Sbjct: 413 AISLASWINFFLLYRKLCQSEFFIPSTNWLRFLLKIFAAAMVMLILLFI 461


>sp|Q6IE06|TRYX3_RAT Putative trypsin-X3 OS=Rattus norvegicus
           GN=Tryx3 PE=2 SV=1
          Length = 240

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +1

Query: 178 PYLSAISPQMLPCVFLVVHPLFVISGGY 261
           PYL  +    LPC  +++HPL+V++  +
Sbjct: 28  PYLVYLKSDYLPCTGVLIHPLWVVTSAH 55


>sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2
          Length = 5635

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
 Frame = -2

Query: 238  RGEQQEKHKGASVEI*QTSMAPT---TCIQRTISGDHVEHITMQKDFPRLIAPEQTKNNE 68
            RG+        ++EI  T +      TC+ R  +G    H+T+    P +I P+ ++   
Sbjct: 3940 RGDGYRILSSGAIEILATQLNHAGRYTCVARNAAGSAHRHVTLHVHEPPVIQPQPSE--- 3996

Query: 67   LRK*GTTLHLWINNP 23
                   LH+ +NNP
Sbjct: 3997 -------LHVILNNP 4004


>sp|Q6DGZ0|CCD75_DANRE Coiled-coil domain-containing protein 75
           OS=Danio rerio GN=ccdc75 PE=2 SV=1
          Length = 262

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 176 TNYLHPAHHIWGSCGTHYNAERLSKAHCPG 87
           T+YL   H+    CGT YN E     +CPG
Sbjct: 225 TSYLRGVHYYCIWCGTAYNDEEDLGTNCPG 254


>sp|Q8QHL3|VGFR1_CHICK Vascular endothelial growth factor receptor 1
            OS=Gallus gallus GN=FLT1 PE=2 SV=1
          Length = 1327

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -3

Query: 219  NTREHLWRYSRQVWHQLPASSAPYLGIMWNTLQCRKTFQGSLPR 88
            NT+  +W Y   +W      ++PY G+  +   C K  +G+  R
Sbjct: 1070 NTKSDVWSYGVLLWEIFSLGASPYPGVQIDEDFCSKLKEGTRMR 1113


>sp|P43071|CDR1_CANAL Multidrug resistance protein CDR1 OS=Candida
            albicans GN=CDR1 PE=3 SV=1
          Length = 1501

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = +3

Query: 9    LRVAWGLLIQRCRVVPYFLSSLFLVCSGAMSLGKSF 116
            L V+W  ++Q  R   Y  S +FLV S A+  G SF
Sbjct: 1180 LLVSWRTIVQDWRSPGYIYSKIFLVVSAALFNGFSF 1215


>sp|Q5T8D3|ACBD5_HUMAN Acyl-CoA-binding domain-containing protein 5
           OS=Homo sapiens GN=ACBD5 PE=1 SV=1
          Length = 534

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = -2

Query: 265 NYIHQK*QIRGEQQEKHKGASVEI*QTSMAPTTCIQRTISGDHVEHIT 122
           N IH    + G   E+ K     + QT  +   CI + I+ DHVE +T
Sbjct: 250 NDIHASSSLNGRSTEEVKPIDENLGQTGKS-AVCIHQDINDDHVEDVT 296
tr_hit_id A9RCP1
Definition tr|A9RCP1|A9RCP1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 41
Score (bit) 46.6
E-value 0.0006
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915368|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_F11.
         (302 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RCP1|A9RCP1_PHYPA Predicted protein OS=Physcomitrella paten...    47   6e-04
tr|A9TJ48|A9TJ48_PHYPA Predicted protein OS=Physcomitrella paten...    40   0.057
tr|A9SSE4|A9SSE4_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.098
tr|Q7XW91|Q7XW91_ORYSJ OSJNBb0043H09.5 protein OS=Oryza sativa s...    34   4.1  
tr|B6HH07|B6HH07_PENCH Pc20g13700 protein OS=Penicillium chrysog...    34   4.1  
tr|Q7F8T0|Q7F8T0_ORYSJ Os02g0192100 protein OS=Oryza sativa subs...    33   5.4  
tr|B8AJA0|B8AJA0_ORYSI Putative uncharacterized protein OS=Oryza...    33   5.4  
tr|A9TB40|A9TB40_PHYPA Predicted protein OS=Physcomitrella paten...    33   5.4  
tr|A3A416|A3A416_ORYSJ Putative uncharacterized protein OS=Oryza...    33   5.4  
tr|A9SAX7|A9SAX7_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.0  
tr|A2EYR6|A2EYR6_TRIVA Adenylate and Guanylate cyclase catalytic...    33   7.0  
tr|A0QQD5|A0QQD5_MYCS2 Major facilitator superfamily protein OS=...    27   7.9  
tr|Q84T47|Q84T47_ORYSJ Putative reverse transcriptase (Retrotran...    33   9.1  
tr|Q2QVM7|Q2QVM7_ORYSJ Exostosin family protein, expressed OS=Or...    33   9.1  
tr|B6SKQ4|B6SKQ4_MAIZE MYB2 OS=Zea mays PE=2 SV=1                      33   9.1  
tr|A3CFZ8|A3CFZ8_ORYSJ Putative uncharacterized protein OS=Oryza...    33   9.1  

>tr|A9RCP1|A9RCP1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64171 PE=4 SV=1
          Length = 985

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = +2

Query: 8   AEGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFLHCNV 130
           A GG+ I+DP++Q+ AL++KL+V  L  G EPWKVF   N+
Sbjct: 800 ASGGVKILDPKLQTQALMTKLVVQSLQPGYEPWKVFARHNL 840


>tr|A9TJ48|A9TJ48_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_93427 PE=4 SV=1
          Length = 170

 Score = 40.0 bits (92), Expect = 0.057
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = +2

Query: 11  EGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFL 118
           +GGL II P  ++ ALL+KLI  GL  G EPWK+ +
Sbjct: 30  QGGLKIIGPATKARALLAKLIARGLTPGLEPWKIMV 65


>tr|A9SSE4|A9SSE4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_230851 PE=4 SV=1
          Length = 209

 Score = 39.3 bits (90), Expect = 0.098
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +2

Query: 2   PQAEGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFLHCNVFHMIPRYGALDAGS 172
           P   GG+ ++DPE Q  AL++KL+V  L  G  PWK  +   +  ++   G +   S
Sbjct: 48  PHKLGGIKLLDPETQIHALMAKLLVRSLLPGFVPWKTLMQHRLRGLVGDLGGVGKSS 104


>tr|Q7XW91|Q7XW91_ORYSJ OSJNBb0043H09.5 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBb0043H09.5 PE=4 SV=1
          Length = 858

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = +2

Query: 2   PQAEGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFLHCNVFHM---IPRYGALDAGS 172
           P+  GGLGII+ E Q+CALL K +     +   PW V L  N ++     PR+   + GS
Sbjct: 721 PKHRGGLGIINLEFQNCALLMKHLDKFYNKRGLPW-VRLLWNAYYKNNPHPRHAMQEKGS 779

Query: 173 W 175
           +
Sbjct: 780 F 780


>tr|B6HH07|B6HH07_PENCH Pc20g13700 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc20g13700 PE=4 SV=1
          Length = 353

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = -3

Query: 180 WHQLPASSAPYLG---IMWNTLQCRKTFQGSLPRNKPRTMSLESKAQLCISGSIIPKPPS 10
           W  +P SS P++G   +   +L+ R+TFQ S PR K   M   +K   C   S+ P  P+
Sbjct: 226 WVVVPESSDPFVGSSELASPSLRTRRTFQASSPRRKSAVMPRLAKRVSC--SSVRPHSPT 283


>tr|Q7F8T0|Q7F8T0_ORYSJ Os02g0192100 protein OS=Oryza sativa subsp.
           japonica GN=P0437H03.102 PE=2 SV=1
          Length = 252

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = -1

Query: 284 QGASVDKLYPPEMTNKG*TTRKTQGSICGDIADKYGTNYLHPAHHIWGSCGTHYNAERLS 105
           +GA  D    P +  +      T  +  G  AD YG+N   P  + WG   + Y + ++ 
Sbjct: 102 KGAGYDPSKAPALGGQA-----TAAAAHGSSADYYGSNQATPPSYAWGQAASAYGSAQVP 156

Query: 104 KAHCPG 87
           ++H  G
Sbjct: 157 QSHASG 162


>tr|B8AJA0|B8AJA0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06196 PE=4 SV=1
          Length = 485

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = -1

Query: 284 QGASVDKLYPPEMTNKG*TTRKTQGSICGDIADKYGTNYLHPAHHIWGSCGTHYNAERLS 105
           +GA  D    P +  +      T  +  G  AD YG+N   P  + WG   + Y + ++ 
Sbjct: 335 KGAGYDPSKAPALGGQA-----TAAAAHGSSADYYGSNQATPPSYAWGQAASAYGSAQVP 389

Query: 104 KAHCPG 87
           ++H  G
Sbjct: 390 QSHASG 395


>tr|A9TB40|A9TB40_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_90441 PE=4 SV=1
          Length = 263

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = +2

Query: 14  GGLGIIDPEMQSCALLSKLIVLGLFRG 94
           GGL ++DPE+Q  ALL++L+V GL  G
Sbjct: 40  GGLKLLDPELQMQALLTQLLVSGLLLG 66


>tr|A3A416|A3A416_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_005538 PE=4 SV=1
          Length = 439

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = -1

Query: 284 QGASVDKLYPPEMTNKG*TTRKTQGSICGDIADKYGTNYLHPAHHIWGSCGTHYNAERLS 105
           +GA  D    P +  +      T  +  G  AD YG+N   P  + WG   + Y + ++ 
Sbjct: 289 KGAGYDPSKAPALGGQA-----TAAAAHGSSADYYGSNQATPPSYAWGQAASAYGSAQVP 343

Query: 104 KAHCPG 87
           ++H  G
Sbjct: 344 QSHASG 349


>tr|A9SAX7|A9SAX7_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_76902 PE=4 SV=1
          Length = 442

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/41 (43%), Positives = 23/41 (56%)
 Frame = +2

Query: 53  ALLSKLIVLGLFRGNEPWKVFLHCNVFHMIPRYGALDAGSW 175
           +LL+KLIV GL  G EPWK+ L     H +    A   G+W
Sbjct: 297 SLLAKLIVRGLTPGLEPWKILLR----HRLETTRAKHYGTW 333