BP915368
Clone id YMU001_000070_F11
Library
Length 302
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GCCGCAGGCTGAGGGTGGCTTGGGGATTATTGATCCAGAGATGCAGAGTTGTGCCTTACT
TTCTAAGCTCATTGTTCTTGGTTTGTTCCGGGGCAATGAGCCTTGGAAAGTCTTTCTGCA
TTGTAATGTGTTCCACATGATCCCCAGATATGGTGCGCTGGATGCAGGTAGTTGGTGCCA
TACTTGTCTGCTATATCTCCACAGATGCTCCCTTGTGTTTTTCTTGTTGTTCACCCCTTA
TTTGTCATTTCTGGTGGATATAGTTTATCCACAGATGCTCCCTGGTGTTTTTCTCATTGT
TC
■■Homology search results ■■ -
sp_hit_id Q32LI2
Definition sp|Q32LI2|TRYX3_BOVIN Probable inactive trypsin-X3 OS=Bos taurus
Align length 25
Score (bit) 31.2
E-value 1.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915368|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_F11.
(302 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q32LI2|TRYX3_BOVIN Probable inactive trypsin-X3 OS=Bos taurus... 31 1.7
sp|Q8BW11|TRYX3_MOUSE Putative trypsin-X3 OS=Mus musculus GN=Try... 30 2.9
sp|Q8IYP2|TRYX3_HUMAN Trypsin-X3 OS=Homo sapiens GN=TRYX3 PE=2 SV=1 30 2.9
sp|Q89AI1|MVIN_BUCBP Virulence factor mviN homolog OS=Buchnera a... 30 2.9
sp|Q6IE06|TRYX3_RAT Putative trypsin-X3 OS=Rattus norvegicus GN=... 30 3.8
sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1... 29 6.4
sp|Q6DGZ0|CCD75_DANRE Coiled-coil domain-containing protein 75 O... 29 6.4
sp|Q8QHL3|VGFR1_CHICK Vascular endothelial growth factor recepto... 29 8.4
sp|P43071|CDR1_CANAL Multidrug resistance protein CDR1 OS=Candid... 29 8.4
sp|Q5T8D3|ACBD5_HUMAN Acyl-CoA-binding domain-containing protein... 29 8.4

>sp|Q32LI2|TRYX3_BOVIN Probable inactive trypsin-X3 OS=Bos taurus
GN=TRYX3 PE=2 SV=1
Length = 242

Score = 31.2 bits (69), Expect = 1.7
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1

Query: 178 PYLSAISPQMLPCVFLVVHPLFVIS 252
PYL + LPCV +++HPL+VI+
Sbjct: 29 PYLIYLKSDYLPCVGVLIHPLWVIT 53


>sp|Q8BW11|TRYX3_MOUSE Putative trypsin-X3 OS=Mus musculus GN=Tryx3
PE=2 SV=1
Length = 241

Score = 30.4 bits (67), Expect = 2.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1

Query: 178 PYLSAISPQMLPCVFLVVHPLFVISGGY 261
PYL + LPC +++HPL+VI+ +
Sbjct: 29 PYLVYLKSDYLPCTGVLIHPLWVITAAH 56


>sp|Q8IYP2|TRYX3_HUMAN Trypsin-X3 OS=Homo sapiens GN=TRYX3 PE=2 SV=1
Length = 241

Score = 30.4 bits (67), Expect = 2.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1

Query: 178 PYLSAISPQMLPCVFLVVHPLFVISGGY 261
PYL + LPC +++HPL+VI+ +
Sbjct: 29 PYLVYLKSDYLPCAGVLIHPLWVITAAH 56


>sp|Q89AI1|MVIN_BUCBP Virulence factor mviN homolog OS=Buchnera
aphidicola subsp. Baizongia pistaciae GN=mviN PE=3 SV=1
Length = 513

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2

Query: 155 ALDAGSWCHTCLLYLHRCSLVFFLLFTPYLSFLVDIVYPQMLPGVFLIV 301
A+ SW + LLY C FF+ T +L FL+ I M+ + L +
Sbjct: 413 AISLASWINFFLLYRKLCQSEFFIPSTNWLRFLLKIFAAAMVMLILLFI 461


>sp|Q6IE06|TRYX3_RAT Putative trypsin-X3 OS=Rattus norvegicus
GN=Tryx3 PE=2 SV=1
Length = 240

Score = 30.0 bits (66), Expect = 3.8
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +1

Query: 178 PYLSAISPQMLPCVFLVVHPLFVISGGY 261
PYL + LPC +++HPL+V++ +
Sbjct: 28 PYLVYLKSDYLPCTGVLIHPLWVVTSAH 55


>sp|Q96RW7|HMCN1_HUMAN Hemicentin-1 OS=Homo sapiens GN=HMCN1 PE=1 SV=2
Length = 5635

Score = 29.3 bits (64), Expect = 6.4
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = -2

Query: 238 RGEQQEKHKGASVEI*QTSMAPT---TCIQRTISGDHVEHITMQKDFPRLIAPEQTKNNE 68
RG+ ++EI T + TC+ R +G H+T+ P +I P+ ++
Sbjct: 3940 RGDGYRILSSGAIEILATQLNHAGRYTCVARNAAGSAHRHVTLHVHEPPVIQPQPSE--- 3996

Query: 67 LRK*GTTLHLWINNP 23
LH+ +NNP
Sbjct: 3997 -------LHVILNNP 4004


>sp|Q6DGZ0|CCD75_DANRE Coiled-coil domain-containing protein 75
OS=Danio rerio GN=ccdc75 PE=2 SV=1
Length = 262

Score = 29.3 bits (64), Expect = 6.4
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1

Query: 176 TNYLHPAHHIWGSCGTHYNAERLSKAHCPG 87
T+YL H+ CGT YN E +CPG
Sbjct: 225 TSYLRGVHYYCIWCGTAYNDEEDLGTNCPG 254


>sp|Q8QHL3|VGFR1_CHICK Vascular endothelial growth factor receptor 1
OS=Gallus gallus GN=FLT1 PE=2 SV=1
Length = 1327

Score = 28.9 bits (63), Expect = 8.4
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = -3

Query: 219 NTREHLWRYSRQVWHQLPASSAPYLGIMWNTLQCRKTFQGSLPR 88
NT+ +W Y +W ++PY G+ + C K +G+ R
Sbjct: 1070 NTKSDVWSYGVLLWEIFSLGASPYPGVQIDEDFCSKLKEGTRMR 1113


>sp|P43071|CDR1_CANAL Multidrug resistance protein CDR1 OS=Candida
albicans GN=CDR1 PE=3 SV=1
Length = 1501

Score = 28.9 bits (63), Expect = 8.4
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3

Query: 9 LRVAWGLLIQRCRVVPYFLSSLFLVCSGAMSLGKSF 116
L V+W ++Q R Y S +FLV S A+ G SF
Sbjct: 1180 LLVSWRTIVQDWRSPGYIYSKIFLVVSAALFNGFSF 1215


>sp|Q5T8D3|ACBD5_HUMAN Acyl-CoA-binding domain-containing protein 5
OS=Homo sapiens GN=ACBD5 PE=1 SV=1
Length = 534

Score = 28.9 bits (63), Expect = 8.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -2

Query: 265 NYIHQK*QIRGEQQEKHKGASVEI*QTSMAPTTCIQRTISGDHVEHIT 122
N IH + G E+ K + QT + CI + I+ DHVE +T
Sbjct: 250 NDIHASSSLNGRSTEEVKPIDENLGQTGKS-AVCIHQDINDDHVEDVT 296


tr_hit_id A9RCP1
Definition tr|A9RCP1|A9RCP1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 41
Score (bit) 46.6
E-value 0.0006
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915368|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_F11.
(302 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9RCP1|A9RCP1_PHYPA Predicted protein OS=Physcomitrella paten... 47 6e-04
tr|A9TJ48|A9TJ48_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.057
tr|A9SSE4|A9SSE4_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.098
tr|Q7XW91|Q7XW91_ORYSJ OSJNBb0043H09.5 protein OS=Oryza sativa s... 34 4.1
tr|B6HH07|B6HH07_PENCH Pc20g13700 protein OS=Penicillium chrysog... 34 4.1
tr|Q7F8T0|Q7F8T0_ORYSJ Os02g0192100 protein OS=Oryza sativa subs... 33 5.4
tr|B8AJA0|B8AJA0_ORYSI Putative uncharacterized protein OS=Oryza... 33 5.4
tr|A9TB40|A9TB40_PHYPA Predicted protein OS=Physcomitrella paten... 33 5.4
tr|A3A416|A3A416_ORYSJ Putative uncharacterized protein OS=Oryza... 33 5.4
tr|A9SAX7|A9SAX7_PHYPA Predicted protein OS=Physcomitrella paten... 33 7.0
tr|A2EYR6|A2EYR6_TRIVA Adenylate and Guanylate cyclase catalytic... 33 7.0
tr|A0QQD5|A0QQD5_MYCS2 Major facilitator superfamily protein OS=... 27 7.9
tr|Q84T47|Q84T47_ORYSJ Putative reverse transcriptase (Retrotran... 33 9.1
tr|Q2QVM7|Q2QVM7_ORYSJ Exostosin family protein, expressed OS=Or... 33 9.1
tr|B6SKQ4|B6SKQ4_MAIZE MYB2 OS=Zea mays PE=2 SV=1 33 9.1
tr|A3CFZ8|A3CFZ8_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.1

>tr|A9RCP1|A9RCP1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_64171 PE=4 SV=1
Length = 985

Score = 46.6 bits (109), Expect = 6e-04
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2

Query: 8 AEGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFLHCNV 130
A GG+ I+DP++Q+ AL++KL+V L G EPWKVF N+
Sbjct: 800 ASGGVKILDPKLQTQALMTKLVVQSLQPGYEPWKVFARHNL 840


>tr|A9TJ48|A9TJ48_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_93427 PE=4 SV=1
Length = 170

Score = 40.0 bits (92), Expect = 0.057
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2

Query: 11 EGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFL 118
+GGL II P ++ ALL+KLI GL G EPWK+ +
Sbjct: 30 QGGLKIIGPATKARALLAKLIARGLTPGLEPWKIMV 65


>tr|A9SSE4|A9SSE4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_230851 PE=4 SV=1
Length = 209

Score = 39.3 bits (90), Expect = 0.098
Identities = 19/57 (33%), Positives = 30/57 (52%)
Frame = +2

Query: 2 PQAEGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFLHCNVFHMIPRYGALDAGS 172
P GG+ ++DPE Q AL++KL+V L G PWK + + ++ G + S
Sbjct: 48 PHKLGGIKLLDPETQIHALMAKLLVRSLLPGFVPWKTLMQHRLRGLVGDLGGVGKSS 104


>tr|Q7XW91|Q7XW91_ORYSJ OSJNBb0043H09.5 protein OS=Oryza sativa
subsp. japonica GN=OSJNBb0043H09.5 PE=4 SV=1
Length = 858

Score = 33.9 bits (76), Expect = 4.1
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2

Query: 2 PQAEGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFLHCNVFHM---IPRYGALDAGS 172
P+ GGLGII+ E Q+CALL K + + PW V L N ++ PR+ + GS
Sbjct: 721 PKHRGGLGIINLEFQNCALLMKHLDKFYNKRGLPW-VRLLWNAYYKNNPHPRHAMQEKGS 779

Query: 173 W 175
+
Sbjct: 780 F 780


>tr|B6HH07|B6HH07_PENCH Pc20g13700 protein OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc20g13700 PE=4 SV=1
Length = 353

Score = 33.9 bits (76), Expect = 4.1
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -3

Query: 180 WHQLPASSAPYLG---IMWNTLQCRKTFQGSLPRNKPRTMSLESKAQLCISGSIIPKPPS 10
W +P SS P++G + +L+ R+TFQ S PR K M +K C S+ P P+
Sbjct: 226 WVVVPESSDPFVGSSELASPSLRTRRTFQASSPRRKSAVMPRLAKRVSC--SSVRPHSPT 283


>tr|Q7F8T0|Q7F8T0_ORYSJ Os02g0192100 protein OS=Oryza sativa subsp.
japonica GN=P0437H03.102 PE=2 SV=1
Length = 252

Score = 33.5 bits (75), Expect = 5.4
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = -1

Query: 284 QGASVDKLYPPEMTNKG*TTRKTQGSICGDIADKYGTNYLHPAHHIWGSCGTHYNAERLS 105
+GA D P + + T + G AD YG+N P + WG + Y + ++
Sbjct: 102 KGAGYDPSKAPALGGQA-----TAAAAHGSSADYYGSNQATPPSYAWGQAASAYGSAQVP 156

Query: 104 KAHCPG 87
++H G
Sbjct: 157 QSHASG 162


>tr|B8AJA0|B8AJA0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_06196 PE=4 SV=1
Length = 485

Score = 33.5 bits (75), Expect = 5.4
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = -1

Query: 284 QGASVDKLYPPEMTNKG*TTRKTQGSICGDIADKYGTNYLHPAHHIWGSCGTHYNAERLS 105
+GA D P + + T + G AD YG+N P + WG + Y + ++
Sbjct: 335 KGAGYDPSKAPALGGQA-----TAAAAHGSSADYYGSNQATPPSYAWGQAASAYGSAQVP 389

Query: 104 KAHCPG 87
++H G
Sbjct: 390 QSHASG 395


>tr|A9TB40|A9TB40_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_90441 PE=4 SV=1
Length = 263

Score = 33.5 bits (75), Expect = 5.4
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +2

Query: 14 GGLGIIDPEMQSCALLSKLIVLGLFRG 94
GGL ++DPE+Q ALL++L+V GL G
Sbjct: 40 GGLKLLDPELQMQALLTQLLVSGLLLG 66


>tr|A3A416|A3A416_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_005538 PE=4 SV=1
Length = 439

Score = 33.5 bits (75), Expect = 5.4
Identities = 17/66 (25%), Positives = 29/66 (43%)
Frame = -1

Query: 284 QGASVDKLYPPEMTNKG*TTRKTQGSICGDIADKYGTNYLHPAHHIWGSCGTHYNAERLS 105
+GA D P + + T + G AD YG+N P + WG + Y + ++
Sbjct: 289 KGAGYDPSKAPALGGQA-----TAAAAHGSSADYYGSNQATPPSYAWGQAASAYGSAQVP 343

Query: 104 KAHCPG 87
++H G
Sbjct: 344 QSHASG 349


>tr|A9SAX7|A9SAX7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_76902 PE=4 SV=1
Length = 442

Score = 33.1 bits (74), Expect = 7.0
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2

Query: 53 ALLSKLIVLGLFRGNEPWKVFLHCNVFHMIPRYGALDAGSW 175
+LL+KLIV GL G EPWK+ L H + A G+W
Sbjct: 297 SLLAKLIVRGLTPGLEPWKILLR----HRLETTRAKHYGTW 333