BP915372 [AcEST]

BP915372
Clone id	YMU001_000070_G03
Library	YMU01
Length	210
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000070_G03.
Accession	BP915372
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	AAAGGTTAGATGGTGAATTGACCTTTTCGAGAACAATGTCCAGGAGCAAGCCTCCCTTGT GACTAAGAAGAAGGCTGGCATTACTATTGCTGTAAATTACAAAGCTCCTCGTATGTAAGA GAAGTGTTGACTCGAGGGTCGTCCCTGCAACAAATGCCTCCTGGCATCTCTCTTCAGCCT ACATATGTCAGTTTTCATTTGCTTGTATTT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	O75445
Definition	sp\|O75445\|USH2A_HUMAN Usherin OS=Homo sapiens
Align length	25
Score (bit)	29.3
E-value	6.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP915372\|Adiantum capillus-veneris mRNA, clone: YMU001_000070_G03. (210 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|O75445\|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3 29 6.4 sp\|Q8RDZ8\|SYE_FUSNN Glutamyl-tRNA synthetase OS=Fusobacterium nu... 29 6.4 >sp\|O75445\|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3 Length = 5202 Score = 29.3 bits (64), Expect = 6.4 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +2 Query: 131 LEGRPCNKCLLASLFSLHMSVFICL 205 +EGR CNKCL + + + F+CL Sbjct: 821 VEGRQCNKCLEGNFYLRQNNSFLCL 845 >sp\|Q8RDZ8\|SYE_FUSNN Glutamyl-tRNA synthetase OS=Fusobacterium nucleatum subsp. nucleatum GN=gltX PE=3 SV=2 Length = 510 Score = 29.3 bits (64), Expect = 6.4 Identities = 12/30 (40%), Positives = 18/30 (60%) Frame = +3 Query: 114 CKRSVDSRVVPATNASWHLSSAYICQFSFA 203 CK+ V +RV P+ H+ +AYI F+ A Sbjct: 5 CKKRVRTRVAPSPTGDPHVGTAYIALFNIA 34
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP915372\|Adiantum capillus-veneris mRNA, clone: YMU001_000070_G03. (210 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****