BP915385
Clone id YMU001_000070_H05
Library
Length 556
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000070_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GATGTGATATCAGGATGATTGGAGATGTATGCTTTATGTGGTTTTCAGACAAAAAGGGTT
TCAGAGAGGGCCTGTCGGGATGGAGGGTGAGGGGTGTCCAAAGTGTTGATTTTTGGCTTG
GATATGTAGAGCTTGAAGTGCTAAATGGGCAGGTTCAAACAACTCATCAAACAGAGCTAC
AAAGTACAAGATAATTGAGTTTGAAGTTGGAGGTGTTTGCAAATTCGTGCCAGATTGGGT
AGTCGCAGATGAAGATTGGGTAGTCGTAGATGAAGGGCCAGAGTTGAAGTGAATGCATGG
GCCTAAAGTGCTCGTCATGTGGAGCATGTTGGTCTTTCCAGATTGCCATTTGGAGCTGTG
GCTGCCAAGATATTGCCCATTGAAGTTACACCGGGGGTCGATTCCGTAACAGTATGGTCG
TCCCGGTCCGTGTGCCATCTGGGAGTTTGTGGGCTTCAACCAGGTACCCGAATATGGTGC
ACTTCATAGAGCAATAAGTGCTCGGGGAGAACCTAGTCGAGAATGTCTATCTCTTGCAGT
GCATTGGAAGCTGGGT
■■Homology search results ■■ -
sp_hit_id Q90592
Definition sp|Q90592|GTR2_CHICK Solute carrier family 2, facilitated glucose transporter member 2 OS=Gallus gallus
Align length 56
Score (bit) 33.5
E-value 0.71
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915385|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_H05.
(556 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q90592|GTR2_CHICK Solute carrier family 2, facilitated glucos... 33 0.71
sp|Q18DN4|HMU_HALWD Halomucin OS=Haloquadratum walsbyi (strain D... 32 1.6
sp|P38972|PUR4_YEAST Phosphoribosylformylglycinamidine synthase ... 30 6.1
sp|Q9Z238|CCNE2_MOUSE G1/S-specific cyclin-E2 OS=Mus musculus GN... 30 6.1

>sp|Q90592|GTR2_CHICK Solute carrier family 2, facilitated glucose
transporter member 2 OS=Gallus gallus GN=SLC2A2 PE=2
SV=1
Length = 533

Score = 33.5 bits (75), Expect = 0.71
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3

Query: 485 EVHHIRVPG*SPQTPR-WHTDRDDHTVTESTPGVTSMGNILAATAPNGNLERPTCS 321
E H+ R+ G P +T RD+ T+T + PG + G+ AP+ E PT S
Sbjct: 46 EAHYGRMLGAIPMVRHATNTSRDNATITVTIPGTEAWGSSEGTLAPSAGFEDPTVS 101


>sp|Q18DN4|HMU_HALWD Halomucin OS=Haloquadratum walsbyi (strain DSM
16790) GN=hmu PE=4 SV=1
Length = 9159

Score = 32.3 bits (72), Expect = 1.6
Identities = 15/31 (48%), Positives = 16/31 (51%)
Frame = -3

Query: 431 TDRDDHTVTESTPGVTSMGNILAATAPNGNL 339
TD DHTVT STP S G + P G L
Sbjct: 7674 TDSHDHTVTGSTPTFVSSGTVTTPENPGGTL 7704


>sp|P38972|PUR4_YEAST Phosphoribosylformylglycinamidine synthase
OS=Saccharomyces cerevisiae GN=ADE6 PE=1 SV=2
Length = 1358

Score = 30.4 bits (67), Expect = 6.1
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1

Query: 310 ARHVEHVGLSRLPFGAVAAKILPIEVTPGVDSVTVWSSRSVCHLGVCGLQ 459
AR + + LP A+ I V P +++ WSS++ VCGLQ
Sbjct: 78 ARQLNDAVANNLPSSALGEDTYLIRVVPRSGTISPWSSKATNIAHVCGLQ 127


>sp|Q9Z238|CCNE2_MOUSE G1/S-specific cyclin-E2 OS=Mus musculus
GN=Ccne2 PE=2 SV=1
Length = 404

Score = 30.4 bits (67), Expect = 6.1
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Frame = -1

Query: 385 LQWAIS---WQPQLQMAIWKDQHAPHDEHFRPMHS---LQLWPFIYDYPIFICDYPIWH 227
L WA S WQ LQ K+ HD+HF+ +HS Q+ + D+ + +C+ H
Sbjct: 105 LSWACSQEVWQNMLQ----KENRYVHDKHFQVLHSDLEPQMRSILLDWLLEVCEVYTLH 159


tr_hit_id Q8S7Y0
Definition tr|Q8S7Y0|Q8S7Y0_ORYSA Putative retroelement OS=Oryza sativa
Align length 66
Score (bit) 33.9
E-value 6.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915385|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_H05.
(556 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8S7Y0|Q8S7Y0_ORYSA Putative retroelement OS=Oryza sativa GN=... 34 6.1
tr|Q7XHA9|Q7XHA9_ORYSJ Retrotransposon protein, putative, LINE s... 34 6.1
tr|Q3U606|Q3U606_MOUSE Putative uncharacterized protein OS=Mus m... 33 7.8

>tr|Q8S7Y0|Q8S7Y0_ORYSA Putative retroelement OS=Oryza sativa
GN=OSJNBa0015O22.23 PE=4 SV=1
Length = 335

Score = 33.9 bits (76), Expect = 6.1
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Frame = +1

Query: 334 LSRLPFGAVAAKILPIEVTPGVDS---VTVWSSRSVCHLGVCGLQPGTR---IWCTS*SN 495
LS +P A LP V +D V +W+ H G C L PG R +WC +
Sbjct: 111 LSSIPVHVSMAIGLPAWVVKAIDKKRRVFLWTGTDAVHGGQCQLSPGVRDRLVWCWTSDQ 170

Query: 496 KCSGRT 513
+ S R+
Sbjct: 171 RYSARS 176


>tr|Q7XHA9|Q7XHA9_ORYSJ Retrotransposon protein, putative, LINE
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os10g02090 PE=4 SV=1
Length = 335

Score = 33.9 bits (76), Expect = 6.1
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 6/66 (9%)
Frame = +1

Query: 334 LSRLPFGAVAAKILPIEVTPGVDS---VTVWSSRSVCHLGVCGLQPGTR---IWCTS*SN 495
LS +P A LP V +D V +W+ H G C L PG R +WC +
Sbjct: 111 LSSIPVHVSMAIGLPAWVVKAIDKKRRVFLWTGTDAVHGGQCQLSPGVRDRLVWCWTSDQ 170

Query: 496 KCSGRT 513
+ S R+
Sbjct: 171 RYSARS 176


>tr|Q3U606|Q3U606_MOUSE Putative uncharacterized protein OS=Mus
musculus GN=Dhx58 PE=2 SV=1
Length = 672

Score = 33.5 bits (75), Expect = 7.8
Identities = 21/60 (35%), Positives = 27/60 (45%)
Frame = +3

Query: 303 LKCSSCGACWSFQIAIWSCGCQDIAH*SYTGGRFRNSMVVPVRVPSGSLWASTRYPNMVH 482
++CS+CG W FQ+ S + S TG R V VP L S RYP +H
Sbjct: 610 IRCSNCGEVWGFQMIYKSVTLLVLKIGSITGNTSREDPGQKV-VPGAFLHTSLRYPAGLH 668