BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915389|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_H10.
         (433 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5U2V9|TM39A_RAT Transmembrane protein 39A OS=Rattus norvegic...    30   5.6  
sp|Q9CYC3|TM39A_MOUSE Transmembrane protein 39A OS=Mus musculus ...    30   5.6  
sp|Q9NV64|TM39A_HUMAN Transmembrane protein 39A OS=Homo sapiens ...    30   5.6  
sp|Q0VCF5|TM39A_BOVIN Transmembrane protein 39A OS=Bos taurus GN...    30   5.6  
sp|Q9DED5|CPEB1_CARAU Cytoplasmic polyadenylation element-bindin...    30   5.6  
sp|Q80W57|ABCG2_RAT ATP-binding cassette sub-family G member 2 O...    29   7.3  

>sp|Q5U2V9|TM39A_RAT Transmembrane protein 39A OS=Rattus norvegicus
           GN=Tmem39a PE=2 SV=1
          Length = 497

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
 Frame = +1

Query: 73  SIPEPFNNQITLPLDSSPSADSVKLKGFDSILDQLYPSLS--VFNLCLSWA*PNLLNLYS 246
           S+ E FNN   +P  S P +  +     + +       +   +FN        +L + Y 
Sbjct: 245 SLKEQFNNSTPIPTHSCPLSPDLIRNEVECLKADFNHRIKDVLFN--------SLFSAYY 296

Query: 247 IPFLSFCLSSETQFFDM 297
           + FL  C    TQ++DM
Sbjct: 297 VAFLPLCFVKSTQYYDM 313


>sp|Q9CYC3|TM39A_MOUSE Transmembrane protein 39A OS=Mus musculus
           GN=Tmem39a PE=2 SV=1
          Length = 486

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 73  SIPEPFNNQITLPLDSSPSADSVKLKGFDSILDQLYPSLSVFNLCLSWA*PN-LLNLYSI 249
           S+ E FNN   +P  S P +        D I +++    + FN  +     N L + Y +
Sbjct: 245 SLKEQFNNATPIPTHSCPLSP-------DLIRNEVECLKADFNHRIKEVLFNSLFSAYYV 297

Query: 250 PFLSFCLSSETQFFDM 297
            FL  C    TQ++DM
Sbjct: 298 AFLPLCFVKSTQYYDM 313


>sp|Q9NV64|TM39A_HUMAN Transmembrane protein 39A OS=Homo sapiens
           GN=TMEM39A PE=2 SV=1
          Length = 488

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 73  SIPEPFNNQITLPLDSSPSADSVKLKGFDSILDQLYPSLSVFNLCLSWA*PN-LLNLYSI 249
           S+ E FNN   +P  S P +        D I +++    + FN  +     N L + Y +
Sbjct: 247 SLKEQFNNATPIPTHSCPLSP-------DLIRNEVECLKADFNHRIKEVLFNSLFSAYYV 299

Query: 250 PFLSFCLSSETQFFDM 297
            FL  C    TQ++DM
Sbjct: 300 AFLPLCFVKSTQYYDM 315


>sp|Q0VCF5|TM39A_BOVIN Transmembrane protein 39A OS=Bos taurus
           GN=TMEM39A PE=2 SV=1
          Length = 488

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 73  SIPEPFNNQITLPLDSSPSADSVKLKGFDSILDQLYPSLSVFNLCLSWA*PN-LLNLYSI 249
           S+ E FNN   +P  S P +        D I +++    + FN  +     N L + Y +
Sbjct: 247 SLKEQFNNATPIPTHSCPLSP-------DLIRNEVECLKADFNHRIKEVLFNSLFSAYYV 299

Query: 250 PFLSFCLSSETQFFDM 297
            FL  C    TQ++DM
Sbjct: 300 AFLPLCFVKSTQYYDM 315


>sp|Q9DED5|CPEB1_CARAU Cytoplasmic polyadenylation element-binding
           protein 1 OS=Carassius auratus GN=cpeb1 PE=2 SV=1
          Length = 559

 Score = 29.6 bits (65), Expect = 5.6
 Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +1

Query: 223 PNLLNLYS--IPFLSFCLSSETQFFDMHKCLNASVSLSGVC 339
           P LLN     IP LS C +++T F  M+  L  S+ LSGVC
Sbjct: 9   PRLLNCLDSDIPALSTCSNADT-FSRMNTMLGNSLDLSGVC 48


>sp|Q80W57|ABCG2_RAT ATP-binding cassette sub-family G member 2
           OS=Rattus norvegicus GN=Abcg2 PE=1 SV=1
          Length = 657

 Score = 29.3 bits (64), Expect = 7.3
 Identities = 17/65 (26%), Positives = 26/65 (40%)
 Frame = +1

Query: 154 FDSILDQLYPSLSVFNLCLSWA*PNLLNLYSIPFLSFCLSSETQFFDMHKCLNASVSLSG 333
           F  +   L  +L      LSW     L  +SIP   F      +F     C   +V+++ 
Sbjct: 547 FMMLFSGLLVNLRTIGPWLSW-----LQYFSIPRYGFTALQHNEFLGQEFCPGLNVTMNS 601

Query: 334 VCINS 348
            C+NS
Sbjct: 602 TCVNS 606

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915389|Adiantum capillus-veneris mRNA, clone:
YMU001_000070_H10.
         (433 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******