BP915391 [AcEST]

BP915391
Clone id	YMU001_000071_A05
Library	YMU01
Length	505
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000071_A05.
Accession	BP915391
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	AGTTGTTGCAGAACAAATCTCTGTGAAGTCTGAACTCACCCTATAATCAAAGAGAGGCCA CCTTGTCTATTCCCTAGAAGTGTACAATGGGACCCATCAGCCCCAGCAGCTACAAATGGC ATGGCCTAGCAAGCAGCATGCAGAGCTTCAGATGAAGGTTGTGGGTTCCGTTGCTTGGGC ACTGAGCTTTAACCTCAGTCAATGATTAACCTTAGCCAATGTTGATGGAGGGAATCTCGG AGCCCTTGTATGGACTTAAGTCTATGTAGAAGAGGGACTTCACCTGTCTTATTGTTCAAG GTCCCTCGGGATTGCTCCTACAACGAAGAGAAGAAGAGTTGTACAGCCTCAAAGCCATTG AAAGATACGTTGCTCGCGAAACTGCATGCGTTTCAAACTACCGCTTAAAGCGTTTCTACA CTTCAAATATTGCACCTTGGAAACTTGTTCAAGTGTATTTCATGGTGACCATCATTGGCT TTCATGGTTTCCTTATATAATGGGA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q04833
Definition	sp\|Q04833\|LRP_CAEEL Low-density lipoprotein receptor-related protein OS=Caenorhabditis elegans
Align length	90
Score (bit)	30.4
E-value	4.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP915391\|Adiantum capillus-veneris mRNA, clone: YMU001_000071_A05. (505 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q04833\|LRP_CAEEL Low-density lipoprotein receptor-related pro... 30 4.9 >sp\|Q04833\|LRP_CAEEL Low-density lipoprotein receptor-related protein OS=Caenorhabditis elegans GN=lrp-1 PE=1 SV=1 Length = 4753 Score = 30.4 bits (67), Expect = 4.9 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 13/90 (14%) Frame = +1 Query: 139 CRASDEGCGFRCLGTELP-------QSMINLSQCWRESRSPCMDLSLCRRGTSPVLLF 297 C A GC F+C + P + ++N ++C E + C+D S C + Sbjct: 1401 CSADRAGCSFKCHNSPNGPICSCPFGEQLVNKTKC---EPENECLDSSSCSQRCKDE--- 1454 Query: 298 KVPRDCSYNE------EKKSCTASKPLKDT 369 K CS +E +K++C + +KDT Sbjct: 1455 KHGFTCSCDEGYELDVDKRTCKVADNVKDT 1484
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A5IF74
Definition	tr\|A5IF74\|A5IF74_LEGPC Putative uncharacterized protein OS=Legionella pneumophila (strain Corby)
Align length	64
Score (bit)	34.7
E-value	2.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP915391\|Adiantum capillus-veneris mRNA, clone: YMU001_000071_A05. (505 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A5IF74\|A5IF74_LEGPC Putative uncharacterized protein OS=Legio... 35 2.7 >tr\|A5IF74\|A5IF74_LEGPC Putative uncharacterized protein OS=Legionella pneumophila (strain Corby) GN=LPC_2094 PE=4 SV=1 Length = 296 Score = 34.7 bits (78), Expect = 2.7 Identities = 21/64 (32%), Positives = 33/64 (51%) Frame = +1 Query: 259 SLCRRGTSPVLLFKVPRDCSYNEEKKSCTASKPLKDTLLAKLHAFQTTA*SVSTLQILHL 438 S+ R+ PVLL K D SYN+ + S+ K+TL H F +T Q+LH+ Sbjct: 130 SIIRQSHVPVLLIKAEPDFSYNKILIATDLSEASKETLQFVFHCFPN-----ATFQLLHI 184 Query: 439 GNLF 450 +++ Sbjct: 185 VDVY 188