BP915399 |
Clone id |
YMU001_000071_B02 |
Library |
YMU01 |
Length |
483 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000071_B02. |
Accession |
BP915399 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTGCAGGGATGATTGGGTTGCAACCATTGCAGAGGCTAATGCTTGATGAAAACTACTTGA CAGGGCCGCTTCCAGCCCTTTTCACTAAATTGCTTCCGGAGAACATAATGGCTAGCTTTG TGGATAACTGCCTCTTGAATTGCCCTCCCAAGTTCTTCTTCTGCCGCGGCGCTAGCCAGA AGCCGAGCACACTATGCAGGCTTTTTAATACAAGTGTGTGACCTGTAGGGTTGCGAGGCA GAGCTGCGGCTTGTTCCCTCCTAAAGCCTCAGGTGCTATGTCAGGAAAATATGGCCCTTT GTAGGCTTGATGTATTCGAATGTGGCTTGGCCATGGGAAATCATGGCGAGAACTCATTTG TGATGCGGAAGCTGTGCTTGATAGCCAGTCAAGCACTTGCTGACAATGTGTATGACATGA ATAGTGTTGAGCATGTGCTCTTGCTGAGAAGCGAGAGTTATGGTACGAAAGGCCGTGCAG GAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6PHN7 |
Definition |
sp|Q6PHN7|TM164_MOUSE Transmembrane protein 164 OS=Mus musculus |
Align length |
57 |
Score (bit) |
30.8 |
E-value |
3.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV54 |
Definition |
tr|A9NV54|A9NV54_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
68 |
Score (bit) |
69.7 |
E-value |
7.0e-11 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915399|Adiantum capillus-veneris mRNA, clone: YMU001_000071_B02. (483 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV54|A9NV54_PICSI Putative uncharacterized protein OS=Picea... 70 7e-11 tr|A5AN28|A5AN28_VITVI Putative uncharacterized protein (Chromos... 66 7e-10 tr|B6TKJ6|B6TKJ6_MAIZE Receptor-like protein kinase OS=Zea mays ... 65 2e-09 tr|A7NT21|A7NT21_VITVI Chromosome chr18 scaffold_1, whole genome... 63 6e-09 tr|B8AG12|B8AG12_ORYSI Putative uncharacterized protein OS=Oryza... 61 2e-08 tr|Q6H6X2|Q6H6X2_ORYSJ Os02g0647300 protein OS=Oryza sativa subs... 60 7e-08 tr|A9TS91|A9TS91_PHYPA Predicted protein OS=Physcomitrella paten... 56 1e-06 tr|Q9SHU4|Q9SHU4_ARATH Putative leucine-rich repeat disease resi... 48 3e-04 tr|Q8LDD9|Q8LDD9_ARATH Putative leucine-rich repeat disease resi... 47 4e-04 tr|Q9FH56|Q9FH56_ARATH Similarity to elicitor-inducible receptor... 47 5e-04 tr|A7P9P1|A7P9P1_VITVI Chromosome chr3 scaffold_8, whole genome ... 42 0.020 tr|O62259|O62259_CAEEL Protein F53F8.1, partially confirmed by t... 34 4.1 tr|B2UCR9|B2UCR9_RALPJ Putative uncharacterized protein OS=Ralst... 33 7.0 tr|Q9M6D8|Q9M6D8_ORYSA LRK1 protein OS=Oryza sativa GN=LRK1 PE=2... 33 7.0 tr|Q6ZLK5|Q6ZLK5_ORYSJ Os07g0134200 protein OS=Oryza sativa subs... 33 7.0 tr|A7PJI8|A7PJI8_VITVI Chromosome chr12 scaffold_18, whole genom... 33 7.0 tr|A2YHX1|A2YHX1_ORYSI Putative uncharacterized protein OS=Oryza... 33 7.0
>tr|A9NV54|A9NV54_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 428
Score = 69.7 bits (169), Expect = 7e-11 Identities = 31/68 (45%), Positives = 41/68 (60%) Frame = +3
Query: 3 AGMIGLQPLQRLMLDENYLTGPLPALFTKLLPENIMASFVDNCLLNCPPKFFFCRGASQK 182 A + G +PL RL L N+L G +P F L + + SF DNCLL+CP FFC+G QK Sbjct: 356 ASLAGKEPLVRLFLAGNFLFGEIPTPFMNLSTQEVNVSFGDNCLLDCPKSLFFCQGGDQK 415
Query: 183 PSTLCRLF 206 ++ CR F Sbjct: 416 AASTCRAF 423
Score = 32.7 bits (73), Expect = 9.2 Identities = 15/30 (50%), Positives = 19/30 (63%) Frame = +3
Query: 3 AGMIGLQPLQRLMLDENYLTGPLPALFTKL 92 A + L LQ+L LD+N L GP+PA F L Sbjct: 158 ASLSSLSNLQQLSLDDNSLEGPIPATFNNL 187
>tr|A5AN28|A5AN28_VITVI Putative uncharacterized protein (Chromosome chr4 scaffold_83, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00036844001 PE=4 SV=1 Length = 422
Score = 66.2 bits (160), Expect = 7e-10 Identities = 29/64 (45%), Positives = 37/64 (57%) Frame = +3
Query: 15 GLQPLQRLMLDENYLTGPLPALFTKLLPENIMASFVDNCLLNCPPKFFFCRGASQKPSTL 194 G+ P +RLML NYL GP+P+ +L P+ VDNCL CP F FC+G QK Sbjct: 354 GVSPFERLMLGGNYLFGPIPSPLMELRPDGATVRLVDNCLYRCPAMFSFCQGGEQKSLME 413
Query: 195 CRLF 206 C+ F Sbjct: 414 CKRF 417
>tr|B6TKJ6|B6TKJ6_MAIZE Receptor-like protein kinase OS=Zea mays PE=2 SV=1 Length = 440
Score = 65.1 bits (157), Expect = 2e-09 Identities = 30/65 (46%), Positives = 38/65 (58%) Frame = +3
Query: 24 PLQRLMLDENYLTGPLPALFTKLLPENIMASFVDNCLLNCPPKFFFCRGASQKPSTLCRL 203 P RLML NYL G LP ++ ++ + S DNCL CP KFFFC+GA QK C Sbjct: 366 PFVRLMLQGNYLCGALPRQLRQIKEDSAVVSLADNCLPRCPHKFFFCQGAPQKDHATCPK 425
Query: 204 FNTSV 218 +TS+ Sbjct: 426 CDTSI 430
>tr|A7NT21|A7NT21_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014503001 PE=4 SV=1 Length = 427
Score = 63.2 bits (152), Expect = 6e-09 Identities = 30/68 (44%), Positives = 37/68 (54%) Frame = +3
Query: 15 GLQPLQRLMLDENYLTGPLPALFTKLLPENIMASFVDNCLLNCPPKFFFCRGASQKPSTL 194 G +RL+L NYL GP+P L P S VDNCL CP FFFC+G +QK Sbjct: 359 GTASFERLLLGGNYLFGPIPGPLMFLKPGYANVSLVDNCLYRCPNSFFFCQGGTQKSLVD 418
Query: 195 CRLFNTSV 218 C+ F S+ Sbjct: 419 CKNFRHSI 426
>tr|B8AG12|B8AG12_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_08279 PE=4 SV=1 Length = 440
Score = 61.2 bits (147), Expect = 2e-08 Identities = 28/58 (48%), Positives = 34/58 (58%) Frame = +3
Query: 24 PLQRLMLDENYLTGPLPALFTKLLPENIMASFVDNCLLNCPPKFFFCRGASQKPSTLC 197 P RLML N+L G LP+ +L + + S DNCL CP KF FCRGA QK + C Sbjct: 378 PFVRLMLQGNFLCGTLPSQLRQLKEDGAVVSLADNCLPKCPHKFSFCRGAPQKSNATC 435
>tr|Q6H6X2|Q6H6X2_ORYSJ Os02g0647300 protein OS=Oryza sativa subsp. japonica GN=P0519A12.21 PE=2 SV=1 Length = 440
Score = 59.7 bits (143), Expect = 7e-08 Identities = 27/58 (46%), Positives = 34/58 (58%) Frame = +3
Query: 24 PLQRLMLDENYLTGPLPALFTKLLPENIMASFVDNCLLNCPPKFFFCRGASQKPSTLC 197 P RLML N+L G LP+ +L + + S DNCL CP +F FCRGA QK + C Sbjct: 378 PFVRLMLQGNFLCGALPSQLRQLKEDGAVVSLADNCLPKCPHQFSFCRGAPQKSNATC 435
>tr|A9TS91|A9TS91_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_197698 PE=4 SV=1 Length = 435
Score = 55.8 bits (133), Expect = 1e-06 Identities = 26/63 (41%), Positives = 37/63 (58%) Frame = +3
Query: 15 GLQPLQRLMLDENYLTGPLPALFTKLLPENIMASFVDNCLLNCPPKFFFCRGASQKPSTL 194 G L +L +D+NYLTG +P+ L + A+FV NCL +CP FC+GA+QK Sbjct: 367 GTVRLGQLYMDDNYLTGSIPSPLLNLTLPDFRANFVRNCLESCPDTLSFCQGATQKTPAE 426
Query: 195 CRL 203 C + Sbjct: 427 CNV 429
>tr|Q9SHU4|Q9SHU4_ARATH Putative leucine-rich repeat disease resistance protein OS=Arabidopsis thaliana GN=At2g15320 PE=2 SV=1 Length = 382
Score = 47.8 bits (112), Expect = 3e-04 Identities = 27/58 (46%), Positives = 34/58 (58%) Frame = +3
Query: 27 LQRLMLDENYLTGPLPALFTKLLPENIMASFVDNCLLNCPPKFFFCRGASQKPSTLCR 200 L+RL LD N+LTG PA F + E +M S +NCL CP K C SQKP +C+ Sbjct: 318 LRRLYLDGNFLTGKPPARFVRTDAE-VMGSLGNNCLQGCPGKAKMC-APSQKPFYICK 373
>tr|Q8LDD9|Q8LDD9_ARATH Putative leucine-rich repeat disease resistance protein OS=Arabidopsis thaliana PE=2 SV=1 Length = 384
Score = 47.4 bits (111), Expect = 4e-04 Identities = 27/58 (46%), Positives = 34/58 (58%) Frame = +3
Query: 27 LQRLMLDENYLTGPLPALFTKLLPENIMASFVDNCLLNCPPKFFFCRGASQKPSTLCR 200 L+RL LD N+LTG PA F + E +M S +NCL CP K C SQKP +C+ Sbjct: 320 LRRLYLDGNFLTGKPPARFVRTDAE-VMGSLGNNCLQGCPGKAKVC-APSQKPFYICK 375
>tr|Q9FH56|Q9FH56_ARATH Similarity to elicitor-inducible receptor-like protein (Putative uncharacterized protein At5g66330) OS=Arabidopsis thaliana GN=At5g66330 PE=2 SV=1 Length = 418
Score = 47.0 bits (110), Expect = 5e-04 Identities = 23/63 (36%), Positives = 30/63 (47%) Frame = +3
Query: 30 QRLMLDENYLTGPLPALFTKLLPENIMASFVDNCLLNCPPKFFFCRGASQKPSTLCRLFN 209 QRL+L N+L G +P L P + NC CP FFC+G Q+ CR F+ Sbjct: 355 QRLLLGGNFLFGVVPGPLMALKPGSANVQLAGNCFSWCPATLFFCQGQEQRSPKECRKFS 414
Query: 210 TSV 218 V Sbjct: 415 RVV 417
|