BP915405 |
Clone id |
YMU001_000071_B10 |
Library |
YMU01 |
Length |
565 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000071_B10. |
Accession |
BP915405 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL211Contig1 |
Sequence |
TGCATACAGACGAGGGCAATGTGATGATGAGCTGGTGAATGTTACAAACAAAAACTCACT TTTTAAGCTTCAAGCAAGGTACATCGTTGAAAGGATGGAGCCAGATTTGTGGGCTAAAGT GCTGGATCCAGAAAATCCATATAGGCGACAGCTTATTGATCAGGTTGTGTCTACAGCTTT GCCAGAAAGTAAGAACCCAGAACAAGTCTCAGCAACAGTTAAAGCTTTCATGACAGCGGA TTTGCCTCATGAGCTTATTGAGCTTCTTGAAAAAATAGTACTTCAGAATTCTGCATTCAG TGACAATCCAAATTTGCAAAACTTGCTCATTTTGACGGCCATAAAAGCTGATAGGTCTCG AGTAATGGATTATGTGAACCGTTTGGATAACTTTGATGGGCCTGCAGTGGGAGAGATAGC TGTTGGCTCAGAGTTGTATGAGGAGGCTTTTGCGATCTTCAAGAAGTTCAACTTGAATGT GCAAGCTGTTAATGTGCTTCTAGATAATATTCGCAGCATTGAAAGAGCTATTGAATTTGC CTCTCGTGTCGAGGAGGGTGAGGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P11442 |
Definition |
sp|P11442|CLH_RAT Clathrin heavy chain 1 OS=Rattus norvegicus |
Align length |
188 |
Score (bit) |
252.0 |
E-value |
1.0e-66 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T0L4 |
Definition |
tr|A9T0L4|A9T0L4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
188 |
Score (bit) |
341.0 |
E-value |
2.0e-92 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915405|Adiantum capillus-veneris mRNA, clone: YMU001_000071_B10. (565 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T0L4|A9T0L4_PHYPA Predicted protein OS=Physcomitrella paten... 341 2e-92 tr|A9U2Z4|A9U2Z4_PHYPA Predicted protein OS=Physcomitrella paten... 338 2e-91 tr|A9RFW2|A9RFW2_PHYPA Predicted protein OS=Physcomitrella paten... 335 8e-91 tr|A7Q3K1|A7Q3K1_VITVI Chromosome chr13 scaffold_48, whole genom... 324 2e-87 tr|A5ACP0|A5ACP0_VITVI Putative uncharacterized protein OS=Vitis... 324 2e-87 tr|A7NYC7|A7NYC7_VITVI Chromosome chr6 scaffold_3, whole genome ... 323 3e-87 tr|Q2RBN7|Q2RBN7_ORYSJ Clathrin heavy chain, putative, expressed... 323 4e-87 tr|Q2QYW2|Q2QYW2_ORYSJ Clathrin heavy chain, putative, expressed... 323 4e-87 tr|Q0IV90|Q0IV90_ORYSJ Os11g0104900 protein OS=Oryza sativa subs... 323 4e-87 tr|A3CE52|A3CE52_ORYSJ Putative uncharacterized protein OS=Oryza... 323 4e-87 tr|A3CE45|A3CE45_ORYSJ Putative uncharacterized protein OS=Oryza... 323 4e-87 tr|Q9CA00|Q9CA00_ARATH Putative clathrin heavy chain, 3' partial... 322 7e-87 tr|Q9C6U0|Q9C6U0_ARATH Clathrin heavy chain, putative OS=Arabido... 322 7e-87 tr|Q0WLB5|Q0WLB5_ARATH Putative uncharacterized protein At3g0853... 322 7e-87 tr|Q9SRM1|Q9SRM1_ARATH Clathrin heavy chain, putative; 28833-197... 322 9e-87 tr|Q0WNJ6|Q0WNJ6_ARATH Putative uncharacterized protein At3g1113... 322 9e-87 tr|Q39834|Q39834_SOYBN Clathrin heavy chain OS=Glycine max PE=2 ... 318 2e-85 tr|A9TN62|A9TN62_PHYPA Predicted protein OS=Physcomitrella paten... 314 2e-84 tr|Q01GQ0|Q01GQ0_OSTTA Clathrin heavy chain, putative (ISS) OS=O... 287 2e-76 tr|A4RQV5|A4RQV5_OSTLU Predicted protein OS=Ostreococcus lucimar... 286 4e-76 tr|A2ZH90|A2ZH90_ORYSI Putative uncharacterized protein OS=Oryza... 273 4e-72 tr|B8BNS6|B8BNS6_ORYSI Putative uncharacterized protein OS=Oryza... 263 5e-69 tr|B7PUK8|B7PUK8_IXOSC Clathrin heavy chain, putative (Fragment)... 262 1e-68 tr|B7XFU6|B7XFU6_BOMMO Clathrin OS=Bombyx mori PE=2 SV=1 261 2e-68 tr|B6NYG4|B6NYG4_BRAFL Putative uncharacterized protein OS=Branc... 260 4e-68 tr|B6MS43|B6MS43_BRAFL Putative uncharacterized protein OS=Branc... 260 4e-68 tr|A7RVC0|A7RVC0_NEMVE Predicted protein OS=Nematostella vectens... 259 9e-68 tr|Q4RUU0|Q4RUU0_TETNG Chromosome 12 SCAF14993, whole genome sho... 257 3e-67 tr|B0X5K8|B0X5K8_CULQU Clathrin heavy chain OS=Culex quinquefasc... 256 5e-67 tr|Q7PQY9|Q7PQY9_ANOGA AGAP003021-PA OS=Anopheles gambiae GN=AGA... 256 6e-67
>tr|A9T0L4|A9T0L4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_167464 PE=4 SV=1 Length = 1709
Score = 341 bits (874), Expect = 2e-92 Identities = 171/188 (90%), Positives = 182/188 (96%) Frame = +2
Query: 2 AYRRGQCDDELVNVTNKNSLFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTAL 181 AY+RG CDDELVNVTNKNSLFKLQARY+VERMEPDLW KVL+PENP RRQLIDQVVSTAL Sbjct: 934 AYKRGNCDDELVNVTNKNSLFKLQARYVVERMEPDLWLKVLNPENPCRRQLIDQVVSTAL 993
Query: 182 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSR 361 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFS NPNLQNLLILTAIKAD +R Sbjct: 994 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSGNPNLQNLLILTAIKADTTR 1053
Query: 362 VMDYVNRLDNFDGPAVGEIAVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFA 541 VMDY+NRLDNFDGPAVGEIAVG+ELYEEAFAIFKKFNLNVQAVNVLLDNIR+I+RA+EFA Sbjct: 1054 VMDYINRLDNFDGPAVGEIAVGAELYEEAFAIFKKFNLNVQAVNVLLDNIRNIDRAVEFA 1113
Query: 542 SRVEEGEV 565 +RVEE +V Sbjct: 1114 ARVEEDDV 1121
>tr|A9U2Z4|A9U2Z4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_227829 PE=4 SV=1 Length = 1715
Score = 338 bits (866), Expect = 2e-91 Identities = 167/188 (88%), Positives = 182/188 (96%) Frame = +2
Query: 2 AYRRGQCDDELVNVTNKNSLFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTAL 181 AY+RG CDDEL+NVTNKNS+FK QARY+VERM+P+LW KVLDPENP+RRQLIDQVVSTAL Sbjct: 938 AYKRGLCDDELINVTNKNSMFKPQARYVVERMDPELWLKVLDPENPFRRQLIDQVVSTAL 997
Query: 182 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSR 361 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFS NPNLQNLLILTAIKAD+SR Sbjct: 998 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSGNPNLQNLLILTAIKADKSR 1057
Query: 362 VMDYVNRLDNFDGPAVGEIAVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFA 541 VMDY+NRLDNFDGPAVGEIAVG+ELYEEAFAIFKKFNLNVQAVNVLLD++R I+RA+EFA Sbjct: 1058 VMDYINRLDNFDGPAVGEIAVGAELYEEAFAIFKKFNLNVQAVNVLLDHLRDIDRAVEFA 1117
Query: 542 SRVEEGEV 565 +RVEE EV Sbjct: 1118 ARVEEDEV 1125
>tr|A9RFW2|A9RFW2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_158810 PE=4 SV=1 Length = 1712
Score = 335 bits (860), Expect = 8e-91 Identities = 169/188 (89%), Positives = 181/188 (96%) Frame = +2
Query: 2 AYRRGQCDDELVNVTNKNSLFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTAL 181 AY+RG CDDELVNVTNKNSLFKLQARY+VERMEPDLW KVL+PEN RRQLIDQVVSTAL Sbjct: 934 AYKRGLCDDELVNVTNKNSLFKLQARYVVERMEPDLWLKVLNPENSCRRQLIDQVVSTAL 993
Query: 182 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSR 361 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFS NPNLQNLLILTAIKAD +R Sbjct: 994 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSGNPNLQNLLILTAIKADTTR 1053
Query: 362 VMDYVNRLDNFDGPAVGEIAVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFA 541 VMDY+NRLDNFDGPAVGEIAVG+EL+EEAFAIFKKFNLNVQAVNVLLDNIR+I+RA+EFA Sbjct: 1054 VMDYINRLDNFDGPAVGEIAVGAELFEEAFAIFKKFNLNVQAVNVLLDNIRNIDRAVEFA 1113
Query: 542 SRVEEGEV 565 +RVEE +V Sbjct: 1114 ARVEEDDV 1121
>tr|A7Q3K1|A7Q3K1_VITVI Chromosome chr13 scaffold_48, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00029319001 PE=4 SV=1 Length = 1702
Score = 324 bits (830), Expect = 2e-87 Identities = 164/188 (87%), Positives = 177/188 (94%) Frame = +2
Query: 2 AYRRGQCDDELVNVTNKNSLFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTAL 181 AYRRGQCD+EL+NVTNKNSLFKLQARY+VERM+ DLW KVLDP+N YRRQLIDQVVSTAL Sbjct: 932 AYRRGQCDEELINVTNKNSLFKLQARYVVERMDSDLWEKVLDPDNDYRRQLIDQVVSTAL 991
Query: 182 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSR 361 PESK+PEQVSA VKAFMTADLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SR Sbjct: 992 PESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSR 1051
Query: 362 VMDYVNRLDNFDGPAVGEIAVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFA 541 VMDY+NRLDNFDGPAVGE+AV ++L+EEAFAIFKKFNLNVQAVNVLLDNI+SIERA+EFA Sbjct: 1052 VMDYINRLDNFDGPAVGEVAVEAQLFEEAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFA 1111
Query: 542 SRVEEGEV 565 RVEE V Sbjct: 1112 FRVEEDAV 1119
>tr|A5ACP0|A5ACP0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_005429 PE=4 SV=1 Length = 1704
Score = 324 bits (830), Expect = 2e-87 Identities = 164/188 (87%), Positives = 177/188 (94%) Frame = +2
Query: 2 AYRRGQCDDELVNVTNKNSLFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTAL 181 AYRRGQCD+EL+NVTNKNSLFKLQARY+VERM+ DLW KVLDP+N YRRQLIDQVVSTAL Sbjct: 934 AYRRGQCDEELINVTNKNSLFKLQARYVVERMDSDLWEKVLDPDNDYRRQLIDQVVSTAL 993
Query: 182 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSR 361 PESK+PEQVSA VKAFMTADLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SR Sbjct: 994 PESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSR 1053
Query: 362 VMDYVNRLDNFDGPAVGEIAVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFA 541 VMDY+NRLDNFDGPAVGE+AV ++L+EEAFAIFKKFNLNVQAVNVLLDNI+SIERA+EFA Sbjct: 1054 VMDYINRLDNFDGPAVGEVAVEAQLFEEAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFA 1113
Query: 542 SRVEEGEV 565 RVEE V Sbjct: 1114 FRVEEDAV 1121
>tr|A7NYC7|A7NYC7_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024069001 PE=4 SV=1 Length = 1559
Score = 323 bits (829), Expect = 3e-87 Identities = 164/188 (87%), Positives = 176/188 (93%) Frame = +2
Query: 2 AYRRGQCDDELVNVTNKNSLFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTAL 181 AYRRGQCDDEL+NVTNKNSLFKLQARY+VERM+ DLW KVL P+N YRRQLIDQVVSTAL Sbjct: 788 AYRRGQCDDELINVTNKNSLFKLQARYVVERMDADLWEKVLSPDNEYRRQLIDQVVSTAL 847
Query: 182 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSR 361 PESK+PEQVSA VKAFMTADLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SR Sbjct: 848 PESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSR 907
Query: 362 VMDYVNRLDNFDGPAVGEIAVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFA 541 VMDY+NRLDNFDGPAVG++AV ++LYEEAFAIFKKFNLNVQAVNVLLDNI+SIERA+EFA Sbjct: 908 VMDYINRLDNFDGPAVGDVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFA 967
Query: 542 SRVEEGEV 565 RVEE V Sbjct: 968 FRVEEDAV 975
>tr|Q2RBN7|Q2RBN7_ORYSJ Clathrin heavy chain, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os11g01380 PE=4 SV=1 Length = 1708
Score = 323 bits (828), Expect = 4e-87 Identities = 167/188 (88%), Positives = 175/188 (93%) Frame = +2
Query: 2 AYRRGQCDDELVNVTNKNSLFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTAL 181 AYRRGQCDDEL+NVTNKNSLFKLQARY+VERM+ DLW KVL PEN YRRQLIDQVVSTAL Sbjct: 934 AYRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWDKVLQPENEYRRQLIDQVVSTAL 993
Query: 182 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSR 361 PESK+PEQVSA VKAFMTADLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SR Sbjct: 994 PESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSR 1053
Query: 362 VMDYVNRLDNFDGPAVGEIAVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFA 541 VMDYVNRLDNFDGPAVGE+AV ++L+EEAFAIFKKFNLNVQAVNVLLDNIRSIERA EFA Sbjct: 1054 VMDYVNRLDNFDGPAVGEVAVEAQLFEEAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFA 1113
Query: 542 SRVEEGEV 565 RVEE V Sbjct: 1114 FRVEEDAV 1121
>tr|Q2QYW2|Q2QYW2_ORYSJ Clathrin heavy chain, putative, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os12g01390 PE=4 SV=1 Length = 1708
Score = 323 bits (828), Expect = 4e-87 Identities = 167/188 (88%), Positives = 175/188 (93%) Frame = +2
Query: 2 AYRRGQCDDELVNVTNKNSLFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTAL 181 AYRRGQCDDEL+NVTNKNSLFKLQARY+VERM+ DLW KVL PEN YRRQLIDQVVSTAL Sbjct: 934 AYRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWDKVLQPENEYRRQLIDQVVSTAL 993
Query: 182 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSR 361 PESK+PEQVSA VKAFMTADLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SR Sbjct: 994 PESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSR 1053
Query: 362 VMDYVNRLDNFDGPAVGEIAVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFA 541 VMDYVNRLDNFDGPAVGE+AV ++L+EEAFAIFKKFNLNVQAVNVLLDNIRSIERA EFA Sbjct: 1054 VMDYVNRLDNFDGPAVGEVAVEAQLFEEAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFA 1113
Query: 542 SRVEEGEV 565 RVEE V Sbjct: 1114 FRVEEDAV 1121
>tr|Q0IV90|Q0IV90_ORYSJ Os11g0104900 protein OS=Oryza sativa subsp. japonica GN=Os11g0104900 PE=4 SV=1 Length = 1695
Score = 323 bits (828), Expect = 4e-87 Identities = 167/188 (88%), Positives = 175/188 (93%) Frame = +2
Query: 2 AYRRGQCDDELVNVTNKNSLFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTAL 181 AYRRGQCDDEL+NVTNKNSLFKLQARY+VERM+ DLW KVL PEN YRRQLIDQVVSTAL Sbjct: 921 AYRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWDKVLQPENEYRRQLIDQVVSTAL 980
Query: 182 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSR 361 PESK+PEQVSA VKAFMTADLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SR Sbjct: 981 PESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSR 1040
Query: 362 VMDYVNRLDNFDGPAVGEIAVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFA 541 VMDYVNRLDNFDGPAVGE+AV ++L+EEAFAIFKKFNLNVQAVNVLLDNIRSIERA EFA Sbjct: 1041 VMDYVNRLDNFDGPAVGEVAVEAQLFEEAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFA 1100
Query: 542 SRVEEGEV 565 RVEE V Sbjct: 1101 FRVEEDAV 1108
>tr|A3CE52|A3CE52_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_033574 PE=4 SV=1 Length = 1708
Score = 323 bits (828), Expect = 4e-87 Identities = 167/188 (88%), Positives = 175/188 (93%) Frame = +2
Query: 2 AYRRGQCDDELVNVTNKNSLFKLQARYIVERMEPDLWAKVLDPENPYRRQLIDQVVSTAL 181 AYRRGQCDDEL+NVTNKNSLFKLQARY+VERM+ DLW KVL PEN YRRQLIDQVVSTAL Sbjct: 934 AYRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWDKVLQPENEYRRQLIDQVVSTAL 993
Query: 182 PESKNPEQVSATVKAFMTADLPHELIELLEKIVLQNSAFSDNPNLQNLLILTAIKADRSR 361 PESK+PEQVSA VKAFMTADLPHELIELLEKIVLQNSAFS N NLQNLLILTAIKAD SR Sbjct: 994 PESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSR 1053
Query: 362 VMDYVNRLDNFDGPAVGEIAVGSELYEEAFAIFKKFNLNVQAVNVLLDNIRSIERAIEFA 541 VMDYVNRLDNFDGPAVGE+AV ++L+EEAFAIFKKFNLNVQAVNVLLDNIRSIERA EFA Sbjct: 1054 VMDYVNRLDNFDGPAVGEVAVEAQLFEEAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFA 1113
Query: 542 SRVEEGEV 565 RVEE V Sbjct: 1114 FRVEEDAV 1121
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