BP915406
Clone id YMU001_000071_B11
Library
Length 433
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGATGATGATGACGAATTGCGATCAATGACAGCTCCATAATGAACCCGATCACAATTCGA
GATAATAATCATGAATTTTGAATCATGATGAATGATTGAATGGAACTGTGGTGAGCGCAT
CAAGAGTTCCCGAGGGATGAGATGGCCTCACACTAAATGATTGAAACACTCTGTATGAAC
TCAGTATCTGATTGATGGATTGGAATTCCCAGGAAATAATTACTCACACATGATTGTGTT
TGAGAGCAGATAGAATGATTGGTTTCTCAAGACCGAAATGCTGCAATCATTTCGTCTATG
GACATGATCACAATAAAGATTAGTTAATTCGACATCAGTGAGGTCCACTGCAGATCTAGA
TGCGATTGCTAAATAAGTTGCCAGGAATCATGGTCCTAAATCAGAATAGATTCTATGTGA
TATTATCTGAATG
■■Homology search results ■■ -
sp_hit_id Q9IDV2
Definition sp|Q9IDV2|ENV_HV1YB Envelope glycoprotein gp160 OS=Human immunodeficiency virus type 1 (isolate YBF106 group N)
Align length 85
Score (bit) 28.9
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915406|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_B11.
(433 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9IDV2|ENV_HV1YB Envelope glycoprotein gp160 OS=Human immunod... 29 9.3

>sp|Q9IDV2|ENV_HV1YB Envelope glycoprotein gp160 OS=Human
immunodeficiency virus type 1 (isolate YBF106 group N)
GN=env PE=3 SV=1
Length = 836

Score = 28.9 bits (63), Expect = 9.3
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = -3

Query: 260 NHSICSQTQSCVSNYFLGIPIHQSDTEFIQSVSII*CEAISSLGNS*CAHHSSIQSFIMI 81
N + + TQ+C F IPIH +I+ C + GN C + S++Q I
Sbjct: 187 NCNTTAVTQACPKTTFEPIPIHYCAP---PGFAIMKCNEGNFSGNGSCTNVSTVQCTHGI 243

Query: 80 QNS*LLSRIVIGFIMELSLIAIRHH 6
+ + +++++ ++ I IRHH
Sbjct: 244 KPV-ISTQLILNGSLDTDDIVIRHH 267


tr_hit_id B8PUP0
Definition tr|B8PUP0|B8PUP0_TRICA Gustatory receptor OS=Tribolium castaneum
Align length 47
Score (bit) 32.7
E-value 9.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915406|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_B11.
(433 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8PUP0|B8PUP0_TRICA Gustatory receptor OS=Tribolium castaneum... 33 9.3

>tr|B8PUP0|B8PUP0_TRICA Gustatory receptor OS=Tribolium castaneum
GN=Gr95 PE=4 SV=1
Length = 358

Score = 32.7 bits (73), Expect = 9.3
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Frame = -2

Query: 138 IPRELLMRSPQFHSIIHHDSKF---MIIISNCDRVHYGAVIDRNSSS 7
+P ++++P F S+ H++SK M+IIS ++Y V D+N++S
Sbjct: 24 LPAYKIIKTPNFKSLTHNNSKLNYIMVIISTTAYLYYFKVGDKNTNS 70