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NBDC - LSDB Archive
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BP915408
Clone id YMU001_000071_C01
Library
Length 516
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_C01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CACAAAACGATGTGCAAACAAAGACTGTAGCACAAGAAACCAACAACCTAGAAATCAACT
AGATGATCAAGTAGTGGCTAACACCACTAGTGATGCAAGGTCAAGATCACAATTTATGGC
ACCTATCCCAGAGATAGATGAGCCGTGGCCAAATGAATTGTGGGAAGCAATTAGAAGTGC
AAAAGATGGAAGTGCGAATTTCCAATCTGCACCCATAACTGAGGTCAATACAGGGCATGA
AGTCTATCAGGGAGACATTCAATCTCTAAATGGAGATGCAGGGACGGAAGTTTCAATTGA
AAGAAAACCAGAGTCCTTGAAGACCTTACCCTCATACATAGGAGAACATGAGGTAGACTC
GGAGACTAGAGTGGTGCCATCTCAGAGGAAATCCATATCCAAGATGATAGATACAAAGAG
TATGCAAGAGTTGATGTAAGCTCCAATACAGTGCACCATTACTCTATCTGAACTGCTTAA
GATTAGACCACATGTATGGGATGAAGTAGGCAACAA
■■Homology search results ■■ -
sp_hit_id A8TSS9
Definition sp|A8TSS9|DMTA2_MONAL Doublesex- and mab-3-related transcription factor A2 OS=Monopterus albus
Align length 78
Score (bit) 35.0
E-value 0.21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915408|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_C01.
         (516 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8TSS9|DMTA2_MONAL Doublesex- and mab-3-related transcription...    35   0.21 
sp|Q6YHU8|DMTA2_ORENI Doublesex- and mab-3-related transcription...    33   0.60 
sp|Q13495|MAMD1_HUMAN Mastermind-like domain-containing protein ...    32   1.3  
sp|Q9AK84|GCSP_STRCO Glycine dehydrogenase [decarboxylating] OS=...    32   1.8  
sp|Q96NX9|DACH2_HUMAN Dachshund homolog 2 OS=Homo sapiens GN=DAC...    31   3.0  
sp|Q10411|SPO15_SCHPO Sporulation-specific protein 15 OS=Schizos...    30   5.1  
sp|Q9Y808|YN91_SCHPO Uncharacterized protein C146.01 OS=Schizosa...    30   6.7  
sp|Q8TAM2|TTC8_HUMAN Tetratricopeptide repeat protein 8 OS=Homo ...    30   6.7  
sp|Q44064|DRNF_AERHY Periplasmic deoxyribonuclease OS=Aeromonas ...    30   6.7  

>sp|A8TSS9|DMTA2_MONAL Doublesex- and mab-3-related transcription
           factor A2 OS=Monopterus albus GN=dmrta2 PE=2 SV=1
          Length = 448

 Score = 35.0 bits (79), Expect = 0.21
 Identities = 21/78 (26%), Positives = 40/78 (51%)
 Frame = +2

Query: 176 SAKDGSANFQSAPITEVNTGHEVYQGDIQSLNGDAGTEVSIERKPESLKTLPSYIGEHEV 355
           S    S +F S+P+++     E   G + SL  D+G+E   + +  S  +  S    + +
Sbjct: 204 SENGDSESFISSPVSKPIKDGEETPGSVSSLGSDSGSETDKDDQEPSPSSAASR-HMNAI 262

Query: 356 DSETRVVPSQRKSISKMI 409
           D  TRV PS ++S+ +++
Sbjct: 263 DILTRVFPSHKRSVQELV 280


>sp|Q6YHU8|DMTA2_ORENI Doublesex- and mab-3-related transcription
           factor A2 OS=Oreochromis niloticus GN=dmrta2 PE=3 SV=1
          Length = 449

 Score = 33.5 bits (75), Expect = 0.60
 Identities = 20/78 (25%), Positives = 40/78 (51%)
 Frame = +2

Query: 176 SAKDGSANFQSAPITEVNTGHEVYQGDIQSLNGDAGTEVSIERKPESLKTLPSYIGEHEV 355
           S    S +F S+P+++     E   G + S+  D+G+E   + +  S  +  S    + +
Sbjct: 205 SENGDSESFISSPVSKPLKDGEETPGSVSSIGSDSGSETDKDDQEPSPSSAASR-HMNAI 263

Query: 356 DSETRVVPSQRKSISKMI 409
           D  TRV PS ++S+ +++
Sbjct: 264 DILTRVFPSHKRSVLELV 281


>sp|Q13495|MAMD1_HUMAN Mastermind-like domain-containing protein 1
           OS=Homo sapiens GN=MAMLD1 PE=2 SV=2
          Length = 774

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
 Frame = +2

Query: 68  QVVANTTSDARSRSQFMAPIPEIDEPWPNELW------EAIRSAKDGSANFQSAP 214
           Q+V+ ++S A+S+SQ  A +P    P P   W      +A+ ++K GSA  Q  P
Sbjct: 270 QIVSPSSSMAQSKSQVQAMLPVALPPLPVPQWHHAHQLKALAASKQGSATKQQGP 324


>sp|Q9AK84|GCSP_STRCO Glycine dehydrogenase [decarboxylating]
           OS=Streptomyces coelicolor GN=gcvP PE=3 SV=1
          Length = 961

 Score = 32.0 bits (71), Expect = 1.8
 Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
 Frame = +2

Query: 248 QGDIQSLNGDAGTEVSIERKPESLKTLPSYIGEHEVDSETRVVPSQRKSISKMIDTKSMQ 427
           +GDI+SL+ +AG     E  PE+L     ++  H V  + R   +  + + ++ D     
Sbjct: 450 EGDIESLDAEAG-----ETLPEALLRTDDFL-THPVFHQHRSETAMLRYLRRLADRDYAL 503

Query: 428 ELM*API-QCTITLSELLKIRPHVWDEVG 511
           +    P+  CT+ L+   ++ P  W E G
Sbjct: 504 DRGMIPLGSCTMKLNATTEMEPVTWPEFG 532


>sp|Q96NX9|DACH2_HUMAN Dachshund homolog 2 OS=Homo sapiens GN=DACH2
           PE=2 SV=1
          Length = 599

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 24/70 (34%), Positives = 30/70 (42%)
 Frame = +2

Query: 278 AGTEVSIERKPESLKTLPSYIGEHEVDSETRVVPSQRKSISKMIDTKSMQELM*APIQCT 457
           AGT V  ER PES    PS    H   S+T    S   S S       ++ +   P+Q  
Sbjct: 362 AGTSVIKERIPESPSPAPSLEENHRPGSQTSSHTSSSVSSSPSQMDHHLERMEEVPVQIP 421

Query: 458 ITLSELLKIR 487
           I  S L KI+
Sbjct: 422 IMKSPLDKIQ 431


>sp|Q10411|SPO15_SCHPO Sporulation-specific protein 15
           OS=Schizosaccharomyces pombe GN=spo15 PE=1 SV=1
          Length = 1957

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 6/136 (4%)
 Frame = +2

Query: 14  ANKDCSTRNQQPRNQLDDQVVANTTSDARSRSQFMAPIPEIDEPWPNELWEAIRSAKDGS 193
           + +D   +  +   +++  + A   S +    +  A I + D+   N L E I+  K  S
Sbjct: 448 SERDFQNKKIKDFEKIEQDLRACLNSSSNELKEKSALIDKKDQEL-NNLREQIKEQKKVS 506

Query: 194 ANFQSA------PITEVNTGHEVYQGDIQSLNGDAGTEVSIERKPESLKTLPSYIGEHEV 355
            + QS+       I      HEVY+  +  L G+  TE+S      + + L S +     
Sbjct: 507 ESTQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEIS------NSEHLSSQLSTLAA 560

Query: 356 DSETRVVPSQRKSISK 403
           + E  V  +   S SK
Sbjct: 561 EKEAAVATNNELSESK 576


>sp|Q9Y808|YN91_SCHPO Uncharacterized protein C146.01
            OS=Schizosaccharomyces pombe GN=SPBC146.01 PE=1 SV=2
          Length = 1063

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
 Frame = +2

Query: 35   RNQQPRNQLDDQVVANTTSDARSRSQFMAPIP-EIDEPWPNELWEAIRSAKDGSANFQSA 211
            + QQP+ Q   Q  A+    A S S  + PI   I    P+   +A  +AK  S    S 
Sbjct: 733  QQQQPQPQSQQQQQASQFPQAPSVSSNVRPINGSIPNAQPSVPGQAQPAAKANSVGNTSF 792

Query: 212  PITE--VNTGHEVYQGDIQSLNGDAGTEVSIERKPESLKTLPS 334
            P+         +V Q D+Q+    A   +    KPE LK  PS
Sbjct: 793  PVDSKLAFQSLDVSQPDLQAKQKIASQVMKHGLKPEDLKLPPS 835


>sp|Q8TAM2|TTC8_HUMAN Tetratricopeptide repeat protein 8 OS=Homo
           sapiens GN=TTC8 PE=1 SV=1
          Length = 531

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
 Frame = +2

Query: 68  QVVANTTSDARSRSQFMAPIPEIDEPWPNELWEAIRSAKDGSANFQSAPITEVNTGHEVY 247
           Q V   T   R  + F+ P  +   P   E  +AIR+ +     + + PIT  ++G  V 
Sbjct: 97  QAVRPITQAGRPITGFLRPSTQSGRPGTME--QAIRTPRTA---YTARPITS-SSGRFVR 150

Query: 248 QGDIQSLNGDAGTEVSIER--------KPESLKTLPSYIGEHEVDSET 367
            G    L    G  +++ R        KP+  K L  YI  HE D +T
Sbjct: 151 LGTASMLTSPDGPFINLSRLNLTKYSQKPKLAKALFEYIFHHENDVKT 198


>sp|Q44064|DRNF_AERHY Periplasmic deoxyribonuclease OS=Aeromonas
           hydrophila GN=dnsH PE=3 SV=1
          Length = 237

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 147 GQMNCGKQLEVQKMEVRISNLHP*LRSIQG 236
           G+ NCGK  E  KME  + NL P +  + G
Sbjct: 107 GRKNCGKSAEFNKMEGDMHNLFPAIGEVNG 136
tr_hit_id Q9VYU0
Definition tr|Q9VYU0|Q9VYU0_DROME CG32662 OS=Drosophila melanogaster
Align length 138
Score (bit) 36.6
E-value 0.75
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915408|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_C01.
         (516 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9VYU0|Q9VYU0_DROME CG32662 OS=Drosophila melanogaster GN=CG3...    37   0.75 
tr|B6KRU2|B6KRU2_TOXGO Putative uncharacterized protein OS=Toxop...    37   0.75 
tr|B0MJI9|B0MJI9_9FIRM Putative uncharacterized protein OS=Anaer...    35   2.2  
tr|B0W980|B0W980_CULQU Putative uncharacterized protein OS=Culex...    35   2.2  
tr|B3S8S3|B3S8S3_TRIAD Putative uncharacterized protein OS=Trich...    34   4.9  
tr|Q9W9L2|Q9W9L2_ADEP3 IIIa OS=Porcine adenovirus A serotype 3 P...    33   6.4  
tr|Q5KIS3|Q5KIS3_CRYNE Putative uncharacterized protein OS=Crypt...    33   6.4  
tr|B2A9F0|B2A9F0_PODAN Predicted CDS Pa_1_550 OS=Podospora anser...    33   6.4  
tr|Q39R49|Q39R49_GEOMG Putative uncharacterized protein OS=Geoba...    33   8.3  
tr|Q871H8|Q871H8_NEUCR Related to SH3-domain protein Cyk3 OS=Neu...    33   8.3  
tr|Q7S7I0|Q7S7I0_NEUCR Predicted protein OS=Neurospora crassa GN...    33   8.3  
tr|A7EAY3|A7EAY3_SCLS1 Putative uncharacterized protein OS=Scler...    33   8.3  

>tr|Q9VYU0|Q9VYU0_DROME CG32662 OS=Drosophila melanogaster
           GN=CG32662 PE=1 SV=2
          Length = 1168

 Score = 36.6 bits (83), Expect = 0.75
 Identities = 31/138 (22%), Positives = 52/138 (37%), Gaps = 1/138 (0%)
 Frame = +2

Query: 5   KRCANKDCSTRNQQPRNQLDDQVVANTTSDARSRSQFMAPIPEIDEPWPNELWEAIRSAK 184
           K+ + K      QQ + Q   Q       DA    +F A +  +++P  N       S K
Sbjct: 244 KQKSQKQSHKAQQQQQQQQQQQKTLAAAEDAAQAQKF-AELSHLNKPKGNSNNNKTASQK 302

Query: 185 DGSANFQSAPITEVNTGHEVYQGDIQSLNGDAGTEVSI-ERKPESLKTLPSYIGEHEVDS 361
            GS   +    T +       +      N    T   + E+KPE        +   + ++
Sbjct: 303 SGSGTSEDEATTTITLAKSAKKAK----NNKQKTSGKVSEKKPEQTNLAEEKVAVEKEEN 358

Query: 362 ETRVVPSQRKSISKMIDT 415
           E R VP  +K+I+K  D+
Sbjct: 359 EERAVPMVKKTINKEQDS 376


>tr|B6KRU2|B6KRU2_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_078620 PE=4 SV=1
          Length = 282

 Score = 36.6 bits (83), Expect = 0.75
 Identities = 25/89 (28%), Positives = 37/89 (41%)
 Frame = +2

Query: 167 AIRSAKDGSANFQSAPITEVNTGHEVYQGDIQSLNGDAGTEVSIERKPESLKTLPSYIGE 346
           AI   + G A+ + A   E  T     + D+ S+  D GTE   ER P   + +P    E
Sbjct: 146 AIPPRESGGASEEEASTVETPTDEVPPEEDVPSVPDDEGTEDVPERTPGPAEEVPPEEAE 205

Query: 347 HEVDSETRVVPSQRKSISKMIDTKSMQEL 433
              +  T+  P QR S        S +E+
Sbjct: 206 PPENEGTKEAPEQRPSTGTQAPLPSSEEV 234


>tr|B0MJI9|B0MJI9_9FIRM Putative uncharacterized protein
           OS=Anaerostipes caccae DSM 14662 GN=ANACAC_03801 PE=3
           SV=1
          Length = 519

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 41/162 (25%), Positives = 61/162 (37%), Gaps = 7/162 (4%)
 Frame = +2

Query: 23  DCSTRNQQPRNQLDDQVVANTTSDARSRSQFMAPIPEIDEPWPNELWEAIRSAKDGSANF 202
           DC T N +     +D  +    ++A   S+FM P P + E   NE WE  +      A  
Sbjct: 12  DCGTTNIKAIIIGEDGKII---AEASRPSKFMIPKPNMQEQDANEWWENTKEIFHSLAEQ 68

Query: 203 QSAPITEVNTGHEVYQGDIQSLNGDA-GTEV------SIERKPESLKTLPSYIGEHEVDS 361
               IT    G  +    +  L  DA G  V         R  + L T+   IGE E   
Sbjct: 69  AGEEITNKIRGISISSHTVSMLPIDADGNPVRNAMTYQDNRSSKELDTILQKIGEEEFIQ 128

Query: 362 ETRVVPSQRKSISKMIDTKSMQELM*APIQCTITLSELLKIR 487
                PS     SK++  K+ +  + A  QC +  S  +  +
Sbjct: 129 IVGGQPSVSFLPSKILWFKNNEPDLFAQTQCFLQASSFINFK 170


>tr|B0W980|B0W980_CULQU Putative uncharacterized protein OS=Culex
           quinquefasciatus GN=CpipJ_CPIJ003596 PE=4 SV=1
          Length = 296

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
 Frame = +2

Query: 101 SRSQFMAPIPEIDEPWPNELWEAIRSAKDGSANFQSAPITEVNTGHE-VYQGDIQSLNGD 277
           +R+Q +AP  ++      +L+E  RS+   SA       ++ ++GHE +   D   LN D
Sbjct: 71  ARNQRVAPKSKLSAEERTQLYEKYRSSPSTSAKPAKVQDSDSHSGHEHLLNADQLDLNSD 130

Query: 278 AGTEVSIERKPESLKTLPSYIGEHEVDSETRVVPSQRKSISKMIDTK 418
             TE  ++ + E+        G    D  +   P  +KS  ++ + K
Sbjct: 131 FFTEAPVKARRENAPRFDCEPGMRLSDLHSDEPPDDQKSAEEIENAK 177


>tr|B3S8S3|B3S8S3_TRIAD Putative uncharacterized protein
           OS=Trichoplax adhaerens GN=TRIADDRAFT_50915 PE=4 SV=1
          Length = 516

 Score = 33.9 bits (76), Expect = 4.9
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +2

Query: 17  NKDCSTRNQQPRNQLDDQVVANTTSDARSRSQFMAPIPEIDEPWPNELWEAIRSAKDGSA 196
           N D ++ NQ+  + +DDQ +     D RSR+ F+  + E+   +   + E    A   S 
Sbjct: 329 NGDTTSNNQEQSSTIDDQDLMTILDDTRSRNCFIDNLTELQGFFKQRVNEMSEEANIVSV 388

Query: 197 N-FQSAP 214
           N FQ AP
Sbjct: 389 NQFQDAP 395


>tr|Q9W9L2|Q9W9L2_ADEP3 IIIa OS=Porcine adenovirus A serotype 3 PE=4
           SV=1
          Length = 622

 Score = 33.5 bits (75), Expect = 6.4
 Identities = 16/46 (34%), Positives = 22/46 (47%)
 Frame = +2

Query: 80  NTTSDARSRSQFMAPIPEIDEPWPNELWEAIRSAKDGSANFQSAPI 217
           +  S A  R+  M  +P +DEPW   L   +    DGS  F S P+
Sbjct: 15  SAASLAPERATRMQALPSLDEPWEQALRRIMALTADGSRRFASQPL 60


>tr|Q5KIS3|Q5KIS3_CRYNE Putative uncharacterized protein
            OS=Cryptococcus neoformans GN=CNBD4410 PE=4 SV=1
          Length = 1507

 Score = 33.5 bits (75), Expect = 6.4
 Identities = 31/104 (29%), Positives = 45/104 (43%)
 Frame = +2

Query: 74   VANTTSDARSRSQFMAPIPEIDEPWPNELWEAIRSAKDGSANFQSAPITEVNTGHEVYQG 253
            VAN      S + F AP  + +EP   E  + I +A D S +   +P  E   GHE  Q 
Sbjct: 938  VANALRSLASITGFSAPETQSEEPLSTEPRQEIPTAPDLSTSAYISPYPE--AGHERVQP 995

Query: 254  DIQSLNGDAGTEVSIERKPESLKTLPSYIGEHEVDSETRVVPSQ 385
            D         +  S  R P SLK L +++      S   ++PS+
Sbjct: 996  D-----SHPASTSSTGRNPSSLKYLNTHMSTR---SSLGILPSR 1031


>tr|B2A9F0|B2A9F0_PODAN Predicted CDS Pa_1_550 OS=Podospora anserina
           PE=4 SV=1
          Length = 1506

 Score = 33.5 bits (75), Expect = 6.4
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +2

Query: 29  STRNQQPRNQLDDQVVANTTSDARSRSQFMAPIPEIDEPWPNELWEAIRSAKDGSANFQS 208
           +T N    +QL + +   +T +   R  F A    + EP P EL    +    GS   +S
Sbjct: 430 ATENSVALSQLSESIAPTSTDNTALRQSFTAAESPVPEPIPQELVPVQKPKPQGSPAVES 489

Query: 209 AP 214
           AP
Sbjct: 490 AP 491


>tr|Q39R49|Q39R49_GEOMG Putative uncharacterized protein
           OS=Geobacter metallireducens (strain GS-15 / ATCC 53774
           / DSM 7210) GN=Gmet_3060 PE=4 SV=1
          Length = 405

 Score = 33.1 bits (74), Expect = 8.3
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
 Frame = +2

Query: 122 PIPEIDEPWPNELWEAIRSAKDGSANFQSAPITEVNT-GHEVYQGDIQSLNGDAGTEVSI 298
           P+ EI  PW   +  AI    D +A  ++   + +   G  +Y   ++ L    G E   
Sbjct: 230 PVEEIQSPWDRTVM-AIADTDDRAALRRAGRASALAAIGRAIYSALVEELRERDGNETPS 288

Query: 299 ERKPESLKTLPSYI 340
             + + LKT+P YI
Sbjct: 289 HHRKQILKTIPQYI 302


>tr|Q871H8|Q871H8_NEUCR Related to SH3-domain protein Cyk3
           OS=Neurospora crassa GN=B16M17.100 PE=4 SV=1
          Length = 1325

 Score = 33.1 bits (74), Expect = 8.3
 Identities = 21/95 (22%), Positives = 40/95 (42%)
 Frame = +2

Query: 128 PEIDEPWPNELWEAIRSAKDGSANFQSAPITEVNTGHEVYQGDIQSLNGDAGTEVSIERK 307
           PE  +PW  E +E I      + + +      ++ G+E Y G   SL G        + +
Sbjct: 435 PEPLDPWAPEAFEEIHQKSRKARDKRPQSTLLIDEGYETYSGTGSSLVGPTSKPPQPQDE 494

Query: 308 PESLKTLPSYIGEHEVDSETRVVPSQRKSISKMID 412
           P  L  L +Y+    ++S  R +     S++ + +
Sbjct: 495 PSRLPQLSNYV--ERMESRLRTMHQHSASMNNITE 527