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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915411
Clone id YMU001_000071_C04
Library
Length 330
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_C04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAACAGCGAGCCCTGTTCTTTCTGCGCTTCTCTCGCTCTCTCTCTGTGCAGTTATATGAT
CAACTCACCATCTTCCTACAGATATCAGGGAGTTGAGGGACCACAAGCGTACTGCAAAGG
ATTTGTTGTGTAAATGGGCAGCTATGGAAGGTGGCAAGTGCTCTACAGAAAACATGCAAT
AGATTGGGTAGTTCTTTTTCTCGGCTCTATAGCCATGTTGGTTGGCTTTCCTGCCTCTCG
AATCTCATCACGTCTCTATTATGAAGATGGTGGCACAAGCATATGGTTGCTGGCATGGAC
TGCAGTAGCAGGATGGCCATTAACGGCCCT
■■Homology search results ■■ -
sp_hit_id Q9ZUH3
Definition sp|Q9ZUH3|PUP5_ARATH Probable purine permease 5 OS=Arabidopsis thaliana
Align length 47
Score (bit) 68.6
E-value 1.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915411|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_C04.
         (330 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZUH3|PUP5_ARATH Probable purine permease 5 OS=Arabidopsis t...    69   1e-11
sp|O49722|PUP6_ARATH Probable purine permease 6 OS=Arabidopsis t...    39   0.008
sp|Q9FZ96|PUP1_ARATH Purine permease 1 OS=Arabidopsis thaliana G...    35   0.12 
sp|Q9LPF6|PUP11_ARATH Probable purine permease 11 OS=Arabidopsis...    35   0.12 
sp|O49726|PUP9_ARATH Probable purine permease 9 OS=Arabidopsis t...    34   0.20 
sp|Q9SY29|PUP4_ARATH Probable purine permease 4 OS=Arabidopsis t...    34   0.26 
sp|Q9FLL4|PUP12_ARATH Putative purine permease 12 OS=Arabidopsis...    34   0.26 
sp|Q8RY83|PUP13_ARATH Probable purine permease 13 OS=Arabidopsis...    33   0.34 
sp|O49725|PUP10_ARATH Probable purine permease 10 OS=Arabidopsis...    33   0.34 
sp|Q2V3H2|PUP7_ARATH Probable purine permease 7 OS=Arabidopsis t...    32   0.76 
sp|Q8RY74|PUP21_ARATH Probable purine permease 21 OS=Arabidopsis...    32   0.76 
sp|Q9MUM4|FTSW_MESVI Cell division protein ftsW homolog OS=Mesos...    32   1.00 
sp|Q94GB1|PUP2_ARATH Purine permease 2 OS=Arabidopsis thaliana G...    32   1.3  
sp|Q9FZ95|PUP3_ARATH Purine permease 3 OS=Arabidopsis thaliana G...    31   2.2  
sp|Q0WRB9|PUP8_ARATH Probable purine permease 8 OS=Arabidopsis t...    30   2.9  
sp|P48280|FTSW_CYAPA Cell division protein ftsW homolog OS=Cyano...    30   3.8  
sp|O77504|S22A1_RABIT Solute carrier family 22 member 1 OS=Oryct...    30   4.9  
sp|Q9D6B9|HRCT1_MOUSE Histidine-rich carboxyl terminus protein 1...    30   5.0  
sp|Q05572|FIXN_RHIME Cytochrome c oxidase subunit 1 homolog, bac...    29   8.4  
sp|Q9DBG1|CP27A_MOUSE Cytochrome P450 27, mitochondrial OS=Mus m...    29   8.4  
sp|P27701|CD82_HUMAN CD82 antigen OS=Homo sapiens GN=CD82 PE=1 SV=1    29   8.4  

>sp|Q9ZUH3|PUP5_ARATH Probable purine permease 5 OS=Arabidopsis
           thaliana GN=PUP5 PE=2 SV=2
          Length = 361

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = +2

Query: 185 WVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPLT 325
           W++LF    AML+ FPAS + SRLY+ +GG S W+++W AVAGWP+T
Sbjct: 37  WILLFFSGAAMLIAFPASSLLSRLYFSNGGKSKWIISWVAVAGWPIT 83


>sp|O49722|PUP6_ARATH Probable purine permease 6 OS=Arabidopsis
           thaliana GN=PUP6 PE=2 SV=2
          Length = 387

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 146 GRWQVLYRKHAIDWVV-LFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPL 322
           G++    R H   W + + L    +L G   + +  RLYYE GG S WL     + G+PL
Sbjct: 21  GKFSTEERSHKYSWRLRVSLYVTLLLAGETIATLLGRLYYEKGGKSTWLETLVQLVGFPL 80

Query: 323 T 325
           T
Sbjct: 81  T 81


>sp|Q9FZ96|PUP1_ARATH Purine permease 1 OS=Arabidopsis thaliana
           GN=PUP1 PE=1 SV=1
          Length = 356

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 12/44 (27%), Positives = 27/44 (61%)
 Frame = +2

Query: 191 VLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPL 322
           ++ +  I + +G     + +RLY+ +GG  IW +++ + AG+P+
Sbjct: 5   LIIINCIILTIGTCGGPLLTRLYFTNGGKRIWFMSFLSTAGFPI 48


>sp|Q9LPF6|PUP11_ARATH Probable purine permease 11 OS=Arabidopsis
           thaliana GN=PUP11 PE=1 SV=1
          Length = 379

 Score = 35.0 bits (79), Expect = 0.12
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +2

Query: 185 WVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPL 322
           WV++ +    ++ G  AS +  R YY++GG S W+      A +P+
Sbjct: 43  WVLVSVNIFFLIGGQAASVLLGRFYYDEGGNSKWMATLVQTAAFPI 88


>sp|O49726|PUP9_ARATH Probable purine permease 9 OS=Arabidopsis
           thaliana GN=PUP9 PE=3 SV=1
          Length = 344

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 218 LVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPL 322
           ++G   + I  RLYYE+GG S WL     + G+P+
Sbjct: 9   VIGQSVATILGRLYYENGGNSKWLATVVQLVGFPI 43


>sp|Q9SY29|PUP4_ARATH Probable purine permease 4 OS=Arabidopsis
           thaliana GN=PUP4 PE=2 SV=1
          Length = 382

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +2

Query: 179 IDWVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPL 322
           + +  LF GSIA       S + ++ Y+  GG+S W+  W   AG+PL
Sbjct: 30  VTYFFLFFGSIA-------SSLLAKYYFVYGGSSRWVSTWVQSAGFPL 70


>sp|Q9FLL4|PUP12_ARATH Putative purine permease 12 OS=Arabidopsis
           thaliana GN=PUP12 PE=3 SV=1
          Length = 358

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 12/46 (26%), Positives = 23/46 (50%)
 Frame = +2

Query: 185 WVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPL 322
           W+++F+    ++     S +  R YY +GG S W+       G+P+
Sbjct: 29  WILVFISIFFLISAQAISVLLGRFYYNEGGNSKWISTLVQTGGFPI 74


>sp|Q8RY83|PUP13_ARATH Probable purine permease 13 OS=Arabidopsis
           thaliana GN=PUP13 PE=2 SV=1
          Length = 361

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 13/56 (23%), Positives = 27/56 (48%)
 Frame = +2

Query: 155 QVLYRKHAIDWVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPL 322
           Q++  K    W+++F+    ++     + +  R YY +GG S W+       G+P+
Sbjct: 25  QLMKLKRTHWWILVFISIFFLISAQAIAVLLGRFYYNEGGNSKWISTLVQTCGFPI 80


>sp|O49725|PUP10_ARATH Probable purine permease 10 OS=Arabidopsis
           thaliana GN=PUP10 PE=2 SV=2
          Length = 390

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +2

Query: 185 WVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPL 322
           W+ + L +  ++ G   + I  R+YY++GG S WL     + G+P+
Sbjct: 44  WLRVTLYTFFVISGQTVATILGRVYYDNGGNSKWLATVVQLVGFPV 89


>sp|Q2V3H2|PUP7_ARATH Probable purine permease 7 OS=Arabidopsis
           thaliana GN=PUP7 PE=2 SV=1
          Length = 390

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +2

Query: 185 WVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPL 322
           W+ + +  I +L   P + I  RLYYE+GG S +++    + G+P+
Sbjct: 42  WLRVSIYVIFVLFCQPLATILGRLYYENGGNSTYVVTLLQLIGFPV 87
tr_hit_id A7R8Q6
Definition tr|A7R8Q6|A7R8Q6_VITVI Chromosome undetermined scaffold_2861, whole genome shotgun sequence (Fragment) OS=Vitis vinifera
Align length 59
Score (bit) 79.3
E-value 9.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915411|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_C04.
         (330 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7R8Q6|A7R8Q6_VITVI Chromosome undetermined scaffold_2861, wh...    79   9e-14
tr|A7R6B2|A7R6B2_VITVI Chromosome undetermined scaffold_1212, wh...    79   9e-14
tr|B6TWA3|B6TWA3_MAIZE ATPUP5 OS=Zea mays PE=2 SV=1                    71   2e-11
tr|B7FIM4|B7FIM4_MEDTR Putative uncharacterized protein OS=Medic...    70   7e-11
tr|Q0IZP7|Q0IZP7_ORYSJ Os09g0557500 protein OS=Oryza sativa subs...    67   3e-10
tr|B8BED8|B8BED8_ORYSI Putative uncharacterized protein OS=Oryza...    67   3e-10
tr|B8B9W0|B8B9W0_ORYSI Putative uncharacterized protein OS=Oryza...    58   3e-07
tr|Q6K5E9|Q6K5E9_ORYSJ Putative purine permease OS=Oryza sativa ...    47   5e-04
tr|Q0J125|Q0J125_ORYSJ Os09g0467500 protein OS=Oryza sativa subs...    47   5e-04
tr|B8BCN1|B8BCN1_ORYSI Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|A3BZR0|A3BZR0_ORYSJ Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|A2Z267|A2Z267_ORYSI Putative uncharacterized protein OS=Oryza...    47   5e-04
tr|Q6ZB72|Q6ZB72_ORYSJ Putative uncharacterized protein OJ1119_B...    47   6e-04
tr|Q6K5F0|Q6K5F0_ORYSJ Os09g0467400 protein OS=Oryza sativa subs...    46   8e-04
tr|B8BCN2|B8BCN2_ORYSI Putative uncharacterized protein OS=Oryza...    46   8e-04
tr|A3BZR2|A3BZR2_ORYSJ Putative uncharacterized protein OS=Oryza...    46   8e-04
tr|B8LLF0|B8LLF0_PICSI Putative uncharacterized protein OS=Picea...    44   0.003
tr|B8LMG1|B8LMG1_PICSI Putative uncharacterized protein OS=Picea...    43   0.007
tr|A7NUR8|A7NUR8_VITVI Chromosome chr18 scaffold_1, whole genome...    40   0.075
tr|A7NUR7|A7NUR7_VITVI Chromosome chr18 scaffold_1, whole genome...    39   0.17 
tr|A5CAM1|A5CAM1_VITVI Putative uncharacterized protein OS=Vitis...    39   0.17 
tr|Q6ZGZ1|Q6ZGZ1_ORYSJ Os02g0689200 protein OS=Oryza sativa subs...    37   0.37 
tr|Q6ZGZ0|Q6ZGZ0_ORYSJ Putative purine permease OS=Oryza sativa ...    37   0.37 
tr|B4FET6|B4FET6_MAIZE ATPUP3 OS=Zea mays PE=2 SV=1                    37   0.37 
tr|A7QQL1|A7QQL1_VITVI Chromosome undetermined scaffold_143, who...    37   0.37 
tr|A5ASX3|A5ASX3_VITVI Putative uncharacterized protein (Fragmen...    37   0.37 
tr|A3AA95|A3AA95_ORYSJ Putative uncharacterized protein OS=Oryza...    37   0.37 
tr|A5C4U8|A5C4U8_VITVI Putative uncharacterized protein OS=Vitis...    37   0.48 
tr|A7NUS0|A7NUS0_VITVI Chromosome chr18 scaffold_1, whole genome...    37   0.63 
tr|B1XI86|B1XI86_SYNP2 Putative uncharacterized protein OS=Synec...    36   1.1  

>tr|A7R8Q6|A7R8Q6_VITVI Chromosome undetermined scaffold_2861, whole
           genome shotgun sequence (Fragment) OS=Vitis vinifera
           GN=GSVIVT00012052001 PE=4 SV=1
          Length = 377

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 36/59 (61%), Positives = 43/59 (72%)
 Frame = +2

Query: 152 WQVLYRKHAIDWVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPLTA 328
           W+   RK    WV+L L S AMLV FPAS I SRLYY++GG S W+++W AVAGWPLTA
Sbjct: 47  WETYKRKPTSYWVLLILSSGAMLVAFPASSILSRLYYDNGGKSKWIISWVAVAGWPLTA 105


>tr|A7R6B2|A7R6B2_VITVI Chromosome undetermined scaffold_1212, whole
           genome shotgun sequence (Fragment) OS=Vitis vinifera
           GN=GSVIVT00008067001 PE=4 SV=1
          Length = 368

 Score = 79.3 bits (194), Expect = 9e-14
 Identities = 36/59 (61%), Positives = 43/59 (72%)
 Frame = +2

Query: 152 WQVLYRKHAIDWVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPLTA 328
           W+   RK    WV+L L S AMLV FPAS I SRLYY++GG S W+++W AVAGWPLTA
Sbjct: 38  WETYKRKPTSYWVLLILSSGAMLVAFPASSILSRLYYDNGGKSKWIISWVAVAGWPLTA 96


>tr|B6TWA3|B6TWA3_MAIZE ATPUP5 OS=Zea mays PE=2 SV=1
          Length = 376

 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 31/48 (64%), Positives = 37/48 (77%)
 Frame = +2

Query: 185 WVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPLTA 328
           W++LFL S AML  FPAS + SRLYY +GG S W+L+W AVAGWPL A
Sbjct: 59  WLLLFLSSGAMLTAFPASSLLSRLYYNEGGQSKWILSWAAVAGWPLPA 106


>tr|B7FIM4|B7FIM4_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 255

 Score = 69.7 bits (169), Expect = 7e-11
 Identities = 31/54 (57%), Positives = 39/54 (72%)
 Frame = +2

Query: 167 RKHAIDWVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPLTA 328
           RK    W++L LG IAM+V FPAS I SR+YY +GG S W+++W AV GWPL A
Sbjct: 46  RKPIPYWILLVLGIIAMVVAFPASSILSRVYYANGGQSKWIISWVAVVGWPLIA 99


>tr|Q0IZP7|Q0IZP7_ORYSJ Os09g0557500 protein OS=Oryza sativa subsp.
           japonica GN=Os09g0557500 PE=2 SV=1
          Length = 388

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +2

Query: 185 WVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPLTA 328
           W++L L + AML  FPAS + SRLYY +GG S W+L+W+AVAGWPL A
Sbjct: 68  WLLLVLSAGAMLTAFPASSLLSRLYYNNGGQSKWILSWSAVAGWPLPA 115


>tr|B8BED8|B8BED8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32358 PE=4 SV=1
          Length = 388

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = +2

Query: 185 WVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPLTA 328
           W++L L + AML  FPAS + SRLYY +GG S W+L+W+AVAGWPL A
Sbjct: 68  WLLLVLSAGAMLTAFPASSLLSRLYYNNGGQSKWILSWSAVAGWPLPA 115


>tr|B8B9W0|B8B9W0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_28880 PE=4 SV=1
          Length = 146

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 25/43 (58%), Positives = 33/43 (76%)
 Frame = +2

Query: 185 WVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAG 313
           W++L L + AML  FPAS + SRLYY +GG S W+L+W+AVAG
Sbjct: 104 WLLLVLSAGAMLTAFPASSLLSRLYYNNGGQSKWILSWSAVAG 146


>tr|Q6K5E9|Q6K5E9_ORYSJ Putative purine permease OS=Oryza sativa
           subsp. japonica GN=P0676H02.4 PE=4 SV=1
          Length = 361

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = +2

Query: 167 RKHAIDWVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPL 322
           R  A  W+++ L    ++VG     I SRLY+  GG   WL AW   AGWPL
Sbjct: 19  RGRAARWLLVALNCGMLVVGTTGGPILSRLYFSKGGHRKWLSAWLETAGWPL 70


>tr|Q0J125|Q0J125_ORYSJ Os09g0467500 protein OS=Oryza sativa subsp.
           japonica GN=Os09g0467500 PE=4 SV=1
          Length = 253

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 26/73 (35%), Positives = 36/73 (49%)
 Frame = +2

Query: 104 QAYCKGFVV*MGSYGRWQVLYRKHAIDWVVLFLGSIAMLVGFPASRISSRLYYEDGGTSI 283
           +A CK  V    + GR +      A  W+++ L    ++VG     + SRLY+  GG   
Sbjct: 4   EATCKDVVHEQAAPGRGR------AARWLLVALNCGMLMVGTTGGPLISRLYFSKGGHRQ 57

Query: 284 WLLAWTAVAGWPL 322
           WL AW   AGWPL
Sbjct: 58  WLSAWLETAGWPL 70


>tr|B8BCN1|B8BCN1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31699 PE=4 SV=1
          Length = 361

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = +2

Query: 167 RKHAIDWVVLFLGSIAMLVGFPASRISSRLYYEDGGTSIWLLAWTAVAGWPL 322
           R  A  W+++ L    ++VG     I SRLY+  GG   WL AW   AGWPL
Sbjct: 19  RGRAARWLLVALNCGMLVVGTTGGPILSRLYFSKGGHRKWLSAWLETAGWPL 70