BP915418 |
Clone id |
YMU001_000071_D01 |
Library |
YMU01 |
Length |
387 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000071_D01. |
Accession |
BP915418 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGTTGACTGATCCCAGAATGATTTGAGAATGGGCCAAATGGATGACATCCACTGGCCCAA AGCCAGTTAAGAACTGGACGTTCATGAATGTGAGAGGCCTTCTCATATGGTGCAACCAAA CCTCCAAGAACAGATGCAAGTCCTGCCAGTATATGCCTCTGGGGAGATATTGGCTCCACT TTTAATTTTTCTGTTTCAGAAACATAGCTCAAATCAATTGAGGCCTTTCCATGTTGCAAC ACAAAAATGGAATCGTGGCTTGCCCACAACAAGCTTTCTCCATCCATCATCAGCTGAGGA TCAACTTCTGCTAACGACAAAACAAACACTGGAATTACACGGGTACCGTAAGATACATAG ACACCGTCTTCTTGAGGAATTTGCTTA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O67226 |
Definition |
sp|O67226|RGYR2_AQUAE Reverse gyrase 2 OS=Aquifex aeolicus |
Align length |
77 |
Score (bit) |
30.4 |
E-value |
2.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TW23 |
Definition |
tr|A9TW23|A9TW23_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
116 |
Score (bit) |
156.0 |
E-value |
4.0e-37 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915418|Adiantum capillus-veneris mRNA, clone: YMU001_000071_D01. (387 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TW23|A9TW23_PHYPA Predicted protein OS=Physcomitrella paten... 156 4e-37 tr|A7Q8R7|A7Q8R7_VITVI Chromosome chr5 scaffold_64, whole genome... 156 6e-37 tr|O23465|O23465_ARATH Putative uncharacterized protein dl4125c ... 155 1e-36 tr|A9T5S3|A9T5S3_PHYPA Predicted protein OS=Physcomitrella paten... 154 2e-36 tr|Q10MF7|Q10MF7_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 148 2e-34 tr|Q10MF6|Q10MF6_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 148 2e-34 tr|Q0DSF8|Q0DSF8_ORYSJ Os03g0310500 protein (Fragment) OS=Oryza ... 148 2e-34 tr|B8AMI8|B8AMI8_ORYSI Putative uncharacterized protein OS=Oryza... 148 2e-34 tr|A3AH97|A3AH97_ORYSJ Putative uncharacterized protein OS=Oryza... 148 2e-34 tr|A7Q8W2|A7Q8W2_VITVI Chromosome chr5 scaffold_64, whole genome... 134 3e-30 tr|A9TV70|A9TV70_PHYPA Predicted protein (Fragment) OS=Physcomit... 39 0.13 tr|Q7PXZ5|Q7PXZ5_ANOGA AGAP001672-PA OS=Anopheles gambiae GN=AGA... 36 0.85 tr|Q5VP90|Q5VP90_ORYSJ Os06g0584200 protein OS=Oryza sativa subs... 36 1.1 tr|Q5VP89|Q5VP89_ORYSJ Os06g0585200 protein OS=Oryza sativa subs... 36 1.1 tr|A2YEF2|A2YEF2_ORYSI Putative uncharacterized protein OS=Oryza... 36 1.1 tr|Q9LHA3|Q9LHA3_ARATH Arabidopsis thaliana genomic DNA, chromos... 34 3.2 tr|B7ZYK2|B7ZYK2_MAIZE Putative uncharacterized protein OS=Zea m... 34 4.2
>tr|A9TW23|A9TW23_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_226015 PE=4 SV=1 Length = 437
Score = 156 bits (395), Expect = 4e-37 Identities = 74/116 (63%), Positives = 89/116 (76%) Frame = -2
Query: 353 SYGTRVIPVFVLSLAEVDPQLMMDGESLLWASHDSIFVLQHGKASIDLSYVSETEKLKVE 174 S+GTRVIPVFVLSL VDPQL+M+GE+L+W SHD++FVLQH I LS VSET+++K Sbjct: 145 SHGTRVIPVFVLSLEGVDPQLLMEGENLMWVSHDAVFVLQHSGGPITLSAVSETKRMKAT 204
Query: 173 PISPQRHIXXXXXXXXXXXXAPYEKASHIHERPVLNWLWASGCHPFGPFSNHSGIS 6 P SPQRHI APYE+ASHIH+RP+L+WLWASG HPFGPFSN S +S Sbjct: 205 PNSPQRHIIAGLAAVVGGLVAPYERASHIHDRPILDWLWASGHHPFGPFSNTSTVS 260
>tr|A7Q8R7|A7Q8R7_VITVI Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033156001 PE=4 SV=1 Length = 809
Score = 156 bits (394), Expect = 6e-37 Identities = 74/124 (59%), Positives = 90/124 (72%) Frame = -2
Query: 374 QEDGVYVSYGTRVIPVFVLSLAEVDPQLMMDGESLLWASHDSIFVLQHGKASIDLSYVSE 195 ++ ++ +YGTRVIPVFVLSLA+VDP LMM+ ESL+W S+D + VLQH I LSYVSE Sbjct: 510 KQSDLHRTYGTRVIPVFVLSLADVDPHLMMEDESLVWTSNDVVIVLQHQNEKIPLSYVSE 569
Query: 194 TEKLKVEPISPQRHIXXXXXXXXXXXXAPYEKASHIHERPVLNWLWASGCHPFGPFSNHS 15 TE+ P QRHI APYEKASH+HERP++NWLW++GCHPFGPFSN S Sbjct: 570 TERRHAIPSQAQRHILAGLASAVGGLSAPYEKASHVHERPIVNWLWSAGCHPFGPFSNTS 629
Query: 14 GISQ 3 ISQ Sbjct: 630 QISQ 633
>tr|O23465|O23465_ARATH Putative uncharacterized protein dl4125c OS=Arabidopsis thaliana GN=dl4125c PE=2 SV=1 Length = 429
Score = 155 bits (391), Expect = 1e-36 Identities = 75/128 (58%), Positives = 89/128 (69%) Frame = -2
Query: 386 KQIPQEDGVYVSYGTRVIPVFVLSLAEVDPQLMMDGESLLWASHDSIFVLQHGKASIDLS 207 K + ++ +Y +YGTRVIPVF+LSLA+VDP LMM+ ESL+WAS D + VLQH I LS Sbjct: 123 KAVKKKGDLYRTYGTRVIPVFILSLADVDPMLMMEDESLVWASSDVVIVLQHLNEKIPLS 182
Query: 206 YVSETEKLKVEPISPQRHIXXXXXXXXXXXXAPYEKASHIHERPVLNWLWASGCHPFGPF 27 YVSETE+ P QRH+ APYEK SH HERP+ NWLWA+GCHPFGPF Sbjct: 183 YVSETERQHAVPSQVQRHVLAGIASALGGVSAPYEKTSHAHERPITNWLWAAGCHPFGPF 242
Query: 26 SNHSGISQ 3 SN S ISQ Sbjct: 243 SNVSLISQ 250
>tr|A9T5S3|A9T5S3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_191923 PE=4 SV=1 Length = 436
Score = 154 bits (390), Expect = 2e-36 Identities = 74/116 (63%), Positives = 88/116 (75%) Frame = -2
Query: 353 SYGTRVIPVFVLSLAEVDPQLMMDGESLLWASHDSIFVLQHGKASIDLSYVSETEKLKVE 174 S+GTRV+PVFVLSL VDPQL+M+GE+L+W SHD+IFVLQH I LS VSET+K+K Sbjct: 144 SHGTRVVPVFVLSLDGVDPQLLMEGENLMWVSHDAIFVLQHPGDPITLSAVSETKKMKAI 203
Query: 173 PISPQRHIXXXXXXXXXXXXAPYEKASHIHERPVLNWLWASGCHPFGPFSNHSGIS 6 P SPQRHI APYE+ASHIH+RP+L+WLWA G HPFGPFSN S +S Sbjct: 204 PTSPQRHIIAGLAAVVGGLVAPYERASHIHDRPILDWLWACGHHPFGPFSNTSSVS 259
>tr|Q10MF7|Q10MF7_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g19690 PE=4 SV=1 Length = 813
Score = 148 bits (373), Expect = 2e-34 Identities = 71/120 (59%), Positives = 86/120 (71%) Frame = -2
Query: 362 VYVSYGTRVIPVFVLSLAEVDPQLMMDGESLLWASHDSIFVLQHGKASIDLSYVSETEKL 183 +Y +YGTRVIPVFVLSLA+VD +L+M+ E+L+W S D + VL+H + LSYVSET + Sbjct: 518 LYRTYGTRVIPVFVLSLADVDAELLMEEENLVWTSKDVVIVLEHNNEKVPLSYVSETTRQ 577
Query: 182 KVEPISPQRHIXXXXXXXXXXXXAPYEKASHIHERPVLNWLWASGCHPFGPFSNHSGISQ 3 P QRHI APYE+ASHIHERPV+NWLWA+GCHPFGPFSN S ISQ Sbjct: 578 FAFPSLAQRHILAGLASAVGGLSAPYERASHIHERPVVNWLWAAGCHPFGPFSNSSKISQ 637
>tr|Q10MF6|Q10MF6_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os03g19690 PE=4 SV=1 Length = 742
Score = 148 bits (373), Expect = 2e-34 Identities = 71/120 (59%), Positives = 86/120 (71%) Frame = -2
Query: 362 VYVSYGTRVIPVFVLSLAEVDPQLMMDGESLLWASHDSIFVLQHGKASIDLSYVSETEKL 183 +Y +YGTRVIPVFVLSLA+VD +L+M+ E+L+W S D + VL+H + LSYVSET + Sbjct: 518 LYRTYGTRVIPVFVLSLADVDAELLMEEENLVWTSKDVVIVLEHNNEKVPLSYVSETTRQ 577
Query: 182 KVEPISPQRHIXXXXXXXXXXXXAPYEKASHIHERPVLNWLWASGCHPFGPFSNHSGISQ 3 P QRHI APYE+ASHIHERPV+NWLWA+GCHPFGPFSN S ISQ Sbjct: 578 FAFPSLAQRHILAGLASAVGGLSAPYERASHIHERPVVNWLWAAGCHPFGPFSNSSKISQ 637
>tr|Q0DSF8|Q0DSF8_ORYSJ Os03g0310500 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os03g0310500 PE=4 SV=1 Length = 334
Score = 148 bits (373), Expect = 2e-34 Identities = 71/120 (59%), Positives = 86/120 (71%) Frame = -2
Query: 362 VYVSYGTRVIPVFVLSLAEVDPQLMMDGESLLWASHDSIFVLQHGKASIDLSYVSETEKL 183 +Y +YGTRVIPVFVLSLA+VD +L+M+ E+L+W S D + VL+H + LSYVSET + Sbjct: 39 LYRTYGTRVIPVFVLSLADVDAELLMEEENLVWTSKDVVIVLEHNNEKVPLSYVSETTRQ 98
Query: 182 KVEPISPQRHIXXXXXXXXXXXXAPYEKASHIHERPVLNWLWASGCHPFGPFSNHSGISQ 3 P QRHI APYE+ASHIHERPV+NWLWA+GCHPFGPFSN S ISQ Sbjct: 99 FAFPSLAQRHILAGLASAVGGLSAPYERASHIHERPVVNWLWAAGCHPFGPFSNSSKISQ 158
>tr|B8AMI8|B8AMI8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_11272 PE=4 SV=1 Length = 818
Score = 148 bits (373), Expect = 2e-34 Identities = 71/120 (59%), Positives = 86/120 (71%) Frame = -2
Query: 362 VYVSYGTRVIPVFVLSLAEVDPQLMMDGESLLWASHDSIFVLQHGKASIDLSYVSETEKL 183 +Y +YGTRVIPVFVLSLA+VD +L+M+ E+L+W S D + VL+H + LSYVSET + Sbjct: 523 LYRTYGTRVIPVFVLSLADVDAELLMEEENLVWTSKDVVIVLEHNNEKVPLSYVSETTRQ 582
Query: 182 KVEPISPQRHIXXXXXXXXXXXXAPYEKASHIHERPVLNWLWASGCHPFGPFSNHSGISQ 3 P QRHI APYE+ASHIHERPV+NWLWA+GCHPFGPFSN S ISQ Sbjct: 583 FAFPSLAQRHILAGLASAVGGLSAPYERASHIHERPVVNWLWAAGCHPFGPFSNSSKISQ 642
>tr|A3AH97|A3AH97_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010169 PE=4 SV=1 Length = 813
Score = 148 bits (373), Expect = 2e-34 Identities = 71/120 (59%), Positives = 86/120 (71%) Frame = -2
Query: 362 VYVSYGTRVIPVFVLSLAEVDPQLMMDGESLLWASHDSIFVLQHGKASIDLSYVSETEKL 183 +Y +YGTRVIPVFVLSLA+VD +L+M+ E+L+W S D + VL+H + LSYVSET + Sbjct: 518 LYRTYGTRVIPVFVLSLADVDAELLMEEENLVWTSKDVVIVLEHNNEKVPLSYVSETTRQ 577
Query: 182 KVEPISPQRHIXXXXXXXXXXXXAPYEKASHIHERPVLNWLWASGCHPFGPFSNHSGISQ 3 P QRHI APYE+ASHIHERPV+NWLWA+GCHPFGPFSN S ISQ Sbjct: 578 FAFPSLAQRHILAGLASAVGGLSAPYERASHIHERPVVNWLWAAGCHPFGPFSNSSKISQ 637
>tr|A7Q8W2|A7Q8W2_VITVI Chromosome chr5 scaffold_64, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033207001 PE=4 SV=1 Length = 389
Score = 134 bits (336), Expect = 3e-30 Identities = 64/108 (59%), Positives = 75/108 (69%) Frame = -2
Query: 326 FVLSLAEVDPQLMMDGESLLWASHDSIFVLQHGKASIDLSYVSETEKLKVEPISPQRHIX 147 FVLSLA+VDP LMM+ ESL+W S+D + VLQH I LSYVSE E+ P QRHI Sbjct: 118 FVLSLADVDPHLMMEDESLVWISNDVVIVLQHQNEKIPLSYVSERERRHAIPSQAQRHIL 177
Query: 146 XXXXXXXXXXXAPYEKASHIHERPVLNWLWASGCHPFGPFSNHSGISQ 3 APYEKASH+HERP++NWLW+ GCHPFGPFSN S +SQ Sbjct: 178 AGLASAVGGLSAPYEKASHVHERPIVNWLWSVGCHPFGPFSNTSQMSQ 225
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