BP915420
Clone id YMU001_000071_D03
Library
Length 300
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_D03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAACATCTTGCTGATGTGCTGGTGATGATTAATTGGAGCATCATTGCAGCCTGCGTCTTG
ATAGTCAATGTTATAGTTGTTCATATCAGCTTCTGCCTCTTTACTGCTGTAATCAGAGAG
CTCTATGTGAGTGCTGTTGGGAAATAGGTCCTTGTAGTCAATCTCTACCTCATTCTCATC
ATCATCCAGCTGGAACTGCTCTAGAGCTGACGAGTCCATCGTGGCAGGGGATTGGGGTTG
GTGGTGAGTGGCAGCTGCCGTCTTCTCAAGCATTTGCCTAAACATGTTCGATTGCAGAAG
■■Homology search results ■■ -
sp_hit_id Q5RCZ8
Definition sp|Q5RCZ8|SN12L_PONAB Schlafen family member 12-like OS=Pongo abelii
Align length 70
Score (bit) 33.5
E-value 0.34
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915420|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_D03.
(300 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5RCZ8|SN12L_PONAB Schlafen family member 12-like OS=Pongo ab... 33 0.34
sp|Q29438|ODFP1_BOVIN Outer dense fiber protein 1 OS=Bos taurus ... 33 0.45
sp|Q7S8V3|NST1_NEUCR Stress response protein nst-1 OS=Neurospora... 32 0.76
sp|Q80921|VE7_HPV48 Protein E7 OS=Human papillomavirus type 48 G... 32 1.3
sp|Q1LUE5|ZCH18_DANRE Zinc finger CCCH domain-containing protein... 31 2.2
sp|Q54TL0|KIF7_DICDI Kinesin-related protein 7 OS=Dictyostelium ... 31 2.2
sp|Q9ZRA3|DAD1_PEA Defender against cell death 1 OS=Pisum sativu... 30 2.9
sp|Q5R733|CPEB1_PONAB Cytoplasmic polyadenylation element-bindin... 30 2.9
sp|Q9BZB8|CPEB1_HUMAN Cytoplasmic polyadenylation element-bindin... 30 2.9
sp|Q8BGE5|FANCM_MOUSE Fanconi anemia group M protein homolog OS=... 30 3.8
sp|Q8R5C8|ZMY11_MOUSE Zinc finger MYND domain-containing protein... 30 3.8
sp|Q15326|ZMY11_HUMAN Zinc finger MYND domain-containing protein... 30 3.8
sp|Q29077|ODFP1_PIG Outer dense fiber protein 1 OS=Sus scrofa GN... 30 3.8
sp|Q7N4V6|MHPB_PHOLL 2,3-dihydroxyphenylpropionate/2,3-dihydroxi... 30 3.8
sp|Q5UPZ5|YL309_MIMIV Uncharacterized protein L309 OS=Acanthamoe... 30 4.9
sp|Q54P65|Y6475_DICDI Uncharacterized protein DDB_G0284767 OS=Di... 30 4.9
sp|O96838|FYV1_DROME Putative FYVE finger-containing phosphoinos... 30 4.9
sp|P21769|ODFP1_RAT Outer dense fiber protein 1 OS=Rattus norveg... 30 5.0
sp|Q14990|ODFP1_HUMAN Outer dense fiber protein 1 OS=Homo sapien... 30 5.0
sp|A0B7K2|SYM_METTP Methionyl-tRNA synthetase OS=Methanosaeta th... 29 6.4
sp|Q15622|OR7A5_HUMAN Olfactory receptor 7A5 OS=Homo sapiens GN=... 29 6.4
sp|Q60879|OLF3_MOUSE Olfactory receptor 3 OS=Mus musculus GN=Olf... 29 6.4
sp|Q54MB8|LEO1_DICDI RNA polymerase-associated protein LEO1 OS=D... 29 6.4
sp|Q9FXG8|BLH10_ARATH BEL1-like homeodomain protein 10 OS=Arabid... 29 6.4
sp|Q98T88|TWS1A_XENLA Twisted gastrulation protein homolog 1-A O... 29 6.5
sp|P0C279|CPEB1_RAT Cytoplasmic polyadenylation element-binding ... 29 6.5
sp|P70166|CPEB1_MOUSE Cytoplasmic polyadenylation element-bindin... 29 6.5
sp|Q10496|YDG9_SCHPO TBC domain-containing protein C26F1.09 OS=S... 29 8.4
sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=... 29 8.4
sp|Q54YH4|DHKB_DICDI Hybrid signal transduction histidine kinase... 29 8.4

>sp|Q5RCZ8|SN12L_PONAB Schlafen family member 12-like OS=Pongo
abelii GN=SLFN12L PE=2 SV=1
Length = 619

Score = 33.5 bits (75), Expect = 0.34
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = -1

Query: 282 FRQMLEKTAAATHHQPQSPA------TMDSSALEQFQLDDDENEVEIDYKD--LFPNSTH 127
F + +EKT + +P+SPA + S +E D N E++YK+ F STH
Sbjct: 195 FLKDMEKTGGRAYLRPESPAKRACVDVQEESNMEALAA-DFFNRTELNYKEKLTFTESTH 253

Query: 126 IELSDYSSKE 97
+E+ ++++++
Sbjct: 254 VEIKNFATEK 263


>sp|Q29438|ODFP1_BOVIN Outer dense fiber protein 1 OS=Bos taurus
GN=ODF1 PE=2 SV=1
Length = 262

Score = 33.1 bits (74), Expect = 0.45
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +3

Query: 51 LRLDSQCYSCSYQLLPLYCCNQRALCECCWEIGPCSQSLPHSHHHP 188
++++S CY C+ P CN + C C PCS P S +P
Sbjct: 196 VKIESPCYPCTSPCNPCNPCNPCSPCSPCNPCNPCSPCSPCSPCNP 241


>sp|Q7S8V3|NST1_NEUCR Stress response protein nst-1 OS=Neurospora
crassa GN=nst-1 PE=3 SV=1
Length = 1350

Score = 32.3 bits (72), Expect = 0.76
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = -1

Query: 261 TAAATHHQPQSPATMDSSALEQFQLDDDENEVEIDYKDLFPNSTHIELSDYSSKEAEADM 82
T+ +HHQP +D A E DD+E EVE +Y + + DYS E ++
Sbjct: 325 TSYPSHHQPSHAQIVDHGAEE----DDEEEEVEEEYSE-----DEQDEDDYSDDEPSEEL 375

Query: 81 --NNYNIDYQDAG 49
++Y D+ + G
Sbjct: 376 HRSDYPADFFNFG 388


>sp|Q80921|VE7_HPV48 Protein E7 OS=Human papillomavirus type 48
GN=E7 PE=3 SV=1
Length = 93

Score = 31.6 bits (70), Expect = 1.3
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 8/55 (14%)
Frame = +3

Query: 36 EHHCSLRLDSQCYSCSYQL--------LPLYCCNQRALCECCWEIGPCSQSLPHS 176
E C R+DS+C++C ++ + C Q L E C CS+ LP +
Sbjct: 36 EEFCPYRIDSKCHNCGCRIRVTVAATEFGIRCFEQLLLKELCLFCPACSRQLPRN 90


>sp|Q1LUE5|ZCH18_DANRE Zinc finger CCCH domain-containing protein 18
OS=Danio rerio GN=zc3h18 PE=1 SV=1
Length = 1148

Score = 30.8 bits (68), Expect = 2.2
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -1

Query: 237 PQSPATMDSSALEQFQLDDDENEVEIDYKDLFPNSTHIELSDYSSKEAEADMNNYNIDYQ 58
P+SPA D + L+DDENEV D + + E +D+ +Y +D +
Sbjct: 30 PESPAEADKGVSDSELLNDDENEVPEHGGDSDSEDRDRQPAGREDPEELSDVEDYKLDRE 89

Query: 57 D 55
+
Sbjct: 90 E 90


>sp|Q54TL0|KIF7_DICDI Kinesin-related protein 7 OS=Dictyostelium
discoideum GN=kif7 PE=2 SV=1
Length = 1255

Score = 30.8 bits (68), Expect = 2.2
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = -1

Query: 234 QSPATMDSSALEQFQLDDDENEVEIDYKDLFPNSTHIELSDYSSKEAEADMNNYNIDYQD 55
Q+ ++ DS +E + DDE ++E D+ NST +SD + + NN N+D +
Sbjct: 498 QNNSSFDSIKVEDLRDLDDEPDIE----DIILNSTLGNISDDDDDDDDHHSNNNNVDDNN 553

Query: 54 AG 49
G
Sbjct: 554 NG 555


>sp|Q9ZRA3|DAD1_PEA Defender against cell death 1 OS=Pisum sativum
GN=DAD1 PE=3 SV=1
Length = 117

Score = 30.4 bits (67), Expect = 2.9
Identities = 11/36 (30%), Positives = 25/36 (69%)
Frame = +1

Query: 34 WSIIAACVLIVNVIVVHISFCLFTAVIRELYVSAVG 141
WS +A + +I +++ F +FTA+++++Y++ VG
Sbjct: 19 WSAYSATPTNLKIIDLYVVFAVFTALLQDVYMALVG 54


>sp|Q5R733|CPEB1_PONAB Cytoplasmic polyadenylation element-binding
protein 1 OS=Pongo abelii GN=CPEB1 PE=2 SV=1
Length = 486

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3

Query: 60 DSQCYSCSYQLLPLYCCNQ---RALCECCWEIGPCSQSLPHSHHHP 188
DS C+ CS Q P +C +Q + C CW + L HH P
Sbjct: 432 DSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGL--RHHSP 475


>sp|Q9BZB8|CPEB1_HUMAN Cytoplasmic polyadenylation element-binding
protein 1 OS=Homo sapiens GN=CPEB1 PE=1 SV=1
Length = 566

Score = 30.4 bits (67), Expect = 2.9
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
Frame = +3

Query: 60 DSQCYSCSYQLLPLYCCNQ---RALCECCWEIGPCSQSLPHSHHHP 188
DS C+ CS Q P +C +Q + C CW + L HH P
Sbjct: 512 DSLCHICSSQPGPFFCRDQVCFKYFCRSCWHWRHSMEGL--RHHSP 555


>sp|Q8BGE5|FANCM_MOUSE Fanconi anemia group M protein homolog OS=Mus
musculus GN=Fancm PE=2 SV=3
Length = 2021

Score = 30.0 bits (66), Expect = 3.8
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -1

Query: 243 HQPQSPATMDSSALEQFQLDDDENEVEIDY---KDLFPNSTHIELSDYSSKEAEADMNNY 73
H P+ + SA Q + + I + K P +TH ++SD S E+D +
Sbjct: 1010 HSPRPVSPASHSAGNSQQNLESNSAKRISHPTEKYCLPGTTHNKVSDRPSF-CESDSEGH 1068

Query: 72 NIDYQDAGCN 43
NI YQ++G N
Sbjct: 1069 NIKYQNSGSN 1078


tr_hit_id Q22NV2
Definition tr|Q22NV2|Q22NV2_TETTH Putative uncharacterized protein OS=Tetrahymena thermophila SB210
Align length 72
Score (bit) 36.2
E-value 0.83
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915420|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_D03.
(300 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q22NV2|Q22NV2_TETTH Putative uncharacterized protein OS=Tetra... 36 0.83
tr|A0BL47|A0BL47_PARTE Chromosome undetermined scaffold_113, who... 35 1.8
tr|B4KMN8|B4KMN8_DROMO GI19374 OS=Drosophila mojavensis GN=GI193... 35 2.4
tr|B8YGI2|B8YGI2_STRSG M protein (Fragment) OS=Streptococcus sp.... 34 3.1
tr|Q4Z424|Q4Z424_PLABE Putative uncharacterized protein (Fragmen... 34 3.1
tr|B0ECF4|B0ECF4_ENTDI Serine/threonine protein kinase PAK, puta... 34 3.1
tr|A1ZA96|A1ZA96_DROME Aspartyl beta-hydroxylase, isoform D OS=D... 34 3.1
tr|B4L5N0|B4L5N0_DROMO GI21761 OS=Drosophila mojavensis GN=GI217... 34 4.1
tr|Q54HS3|Q54HS3_DICDI SET domain-containing protein OS=Dictyost... 33 5.4
tr|Q248B7|Q248B7_TETTH Putative uncharacterized protein OS=Tetra... 33 7.0
tr|Q22GF4|Q22GF4_TETTH Putative uncharacterized protein OS=Tetra... 33 7.0
tr|B6MZA2|B6MZA2_BRAFL Putative uncharacterized protein OS=Branc... 33 7.0
tr|B0XE59|B0XE59_CULQU Sulfatase-1 OS=Culex quinquefasciatus GN=... 33 7.0
tr|A0BPP7|A0BPP7_PARTE Chromosome undetermined scaffold_12, whol... 33 7.0
tr|B8PG02|B8PG02_9APHY Predicted protein OS=Postia placenta Mad-... 33 7.0
tr|Q3SZZ8|Q3SZZ8_BOVIN Outer dense fiber of sperm tails 1 OS=Bos... 33 7.0
tr|Q8IBV5|Q8IBV5_PLAF7 Putative uncharacterized protein PF07_005... 33 9.1
tr|B4J977|B4J977_DROGR GH19883 OS=Drosophila grimshawi GN=GH1988... 33 9.1
tr|Q7SBP1|Q7SBP1_NEUCR Predicted protein OS=Neurospora crassa GN... 33 9.1
tr|Q7S1S7|Q7S1S7_NEUCR Predicted protein OS=Neurospora crassa GN... 33 9.1
tr|B8P0K4|B8P0K4_9APHY Predicted protein OS=Postia placenta Mad-... 33 9.1
tr|B6HBT2|B6HBT2_PENCH Pc18g00400 protein OS=Penicillium chrysog... 33 9.1

>tr|Q22NV2|Q22NV2_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00418490 PE=4
SV=1
Length = 1770

Score = 36.2 bits (82), Expect = 0.83
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = -1

Query: 216 DSSALEQFQLDDDENEVEIDYKDLFPNSTHIELSDYSSKEAEADMNNYNIDYQDAGCNDA 37
D +Q Q D ++ + +Y++ + N +Y ++ + + +NYN +YQ +D
Sbjct: 1306 DDDEEDQEQEDQNDEDYSQNYQNNYYNQQQYYEQEYDDQDQDQNASNYNDNYQQENDDDN 1365

Query: 36 PINHHQHISKMF 1
N +Q+ +K F
Sbjct: 1366 SYNQYQNKNKGF 1377


>tr|A0BL47|A0BL47_PARTE Chromosome undetermined scaffold_113, whole
genome shotgun sequence OS=Paramecium tetraurelia
GN=GSPATT00029895001 PE=4 SV=1
Length = 407

Score = 35.0 bits (79), Expect = 1.8
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Frame = -1

Query: 207 ALEQFQLDDDEN-----EVEIDYKDLFPNSTHIELS---DYSSKEAEADMNNYNIDYQDA 52
A+E FQL+ D++ + +D++ PN H E + +Y KE + NY + +Q
Sbjct: 75 AIENFQLNFDDHYYADSSIRLDHR---PNGKHTEYAIEINYKCKEYGGTLINYEMQFQVP 131

Query: 51 GCNDAPI 31
C DA I
Sbjct: 132 SCGDAQI 138


>tr|B4KMN8|B4KMN8_DROMO GI19374 OS=Drosophila mojavensis GN=GI19374
PE=4 SV=1
Length = 405

Score = 34.7 bits (78), Expect = 2.4
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = -1

Query: 240 QPQSPATMDSSALEQFQLDDDENEVEIDYKDLFPNSTHIELSDYSSKEAEADMNNYNIDY 61
Q Q+PA +++ + + DD++ + E D K L + H EL S + +ADM N +D
Sbjct: 316 QSQTPALINNGSSDSDSSDDEDEDSEEDNKHLARRALHDEL---PSTDTDADM-NMEVDE 371

Query: 60 QDAGCNDAP 34
DA + P
Sbjct: 372 ADAEADAEP 380


>tr|B8YGI2|B8YGI2_STRSG M protein (Fragment) OS=Streptococcus sp.
group G GN=emm PE=4 SV=1
Length = 376

Score = 34.3 bits (77), Expect = 3.1
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = -1

Query: 291 SNMFRQMLEKTAAATHHQPQSPATMDSSALEQFQLDDDENEVEIDYKDLFPNSTHI-ELS 115
SN++ Q EK T + +D + E ++++ E ++Y+DL THI E
Sbjct: 41 SNLWLQQYEKNEELTKKNEELTKKLDEAEKELGKVEEKLKEARLNYQDLAEVQTHIREKL 100

Query: 114 DYSSKEAEADMNNYNIDYQD 55
+ E + ++YQD
Sbjct: 101 KAEKAQVEEKLKEARLNYQD 120


>tr|Q4Z424|Q4Z424_PLABE Putative uncharacterized protein (Fragment)
OS=Plasmodium berghei GN=PB000962.00.0 PE=4 SV=1
Length = 325

Score = 34.3 bits (77), Expect = 3.1
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = -1

Query: 186 DDDENEVEIDYKDLFPNSTHIELSDYSS---KEAEADMNNYNIDYQDAGCND 40
DDD ++ E ++ +L NS + ++ DYS+ K +MNN N Q CN+
Sbjct: 95 DDDSDQNEENFTNLLENSENEDIIDYSNRRKKTTNRNMNNNNFTTQVKKCNN 146


>tr|B0ECF4|B0ECF4_ENTDI Serine/threonine protein kinase PAK,
putative OS=Entamoeba dispar SAW760 GN=EDI_007630 PE=4
SV=1
Length = 409

Score = 34.3 bits (77), Expect = 3.1
Identities = 24/82 (29%), Positives = 33/82 (40%)
Frame = -1

Query: 249 THHQPQSPATMDSSALEQFQLDDDENEVEIDYKDLFPNSTHIELSDYSSKEAEADMNNYN 70
THHQ Q + F+ DE E+ I F TH+EL D +
Sbjct: 7 THHQKQKSKDKKGGFMSFFKKKKDEEELVISDPRDFEQITHVELGDSGLTGFPPEWREKL 66

Query: 69 IDYQDAGCNDAPINHHQHISKM 4
I AG DA IN ++ +K+
Sbjct: 67 I---QAGLTDAEINTNEDSAKL 85


>tr|A1ZA96|A1ZA96_DROME Aspartyl beta-hydroxylase, isoform D
OS=Drosophila melanogaster GN=Asph PE=4 SV=1
Length = 556

Score = 34.3 bits (77), Expect = 3.1
Identities = 27/77 (35%), Positives = 35/77 (45%)
Frame = -1

Query: 267 EKTAAATHHQPQSPATMDSSALEQFQLDDDENEVEIDYKDLFPNSTHIELSDYSSKEAEA 88
E AAA +S S A E+ D+DE E EI+ S E S Y+++ A A
Sbjct: 222 EDEAAADDDAVESTEAPLSKAEEEDDEDEDEEEQEIE------ESVEPERSQYAAQSAPA 275

Query: 87 DMNNYNIDYQDAGCNDA 37
NN + D D NDA
Sbjct: 276 KDNNDDDDDDDQDKNDA 292


>tr|B4L5N0|B4L5N0_DROMO GI21761 OS=Drosophila mojavensis GN=GI21761
PE=4 SV=1
Length = 2748

Score = 33.9 bits (76), Expect = 4.1
Identities = 24/86 (27%), Positives = 42/86 (48%)
Frame = -1

Query: 267 EKTAAATHHQPQSPATMDSSALEQFQLDDDENEVEIDYKDLFPNSTHIELSDYSSKEAEA 88
E T + + QPQS + S + QL E+DY L P +T EL ++++ EA
Sbjct: 249 EPTPSNSSEQPQSQSQSQSQSQPPPQLGKTVTIQELDYV-LLPATTTAELKPAATQQHEA 307

Query: 87 DMNNYNIDYQDAGCNDAPINHHQHIS 10
+ N N +A +++ N++ + S
Sbjct: 308 TVTNNNATGSNASSSNSNNNNNNNSS 333


>tr|Q54HS3|Q54HS3_DICDI SET domain-containing protein OS=Dictyostelium
discoideum GN=set1 PE=4 SV=1
Length = 1486

Score = 33.5 bits (75), Expect = 5.4
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Frame = -1

Query: 246 HHQPQSPATMDSSALEQFQLD-DDENEVEIDYKDLFPNSTHIELSDYSSK--EAEADMNN 76
HH + S L+ LD D+EN+ E DY N H+ELSD ++ + D +
Sbjct: 978 HHDRSEVELYNESDLQVDVLDSDNENQDESDYHKSSDNFGHVELSDDDNEFDSLDTDQDL 1037

Query: 75 YNIDYQDAG 49
Y+ + D G
Sbjct: 1038 YDTEENDNG 1046


>tr|Q248B7|Q248B7_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_00532520 PE=4
SV=1
Length = 2571

Score = 33.1 bits (74), Expect = 7.0
Identities = 21/73 (28%), Positives = 33/73 (45%)
Frame = -1

Query: 237 PQSPATMDSSALEQFQLDDDENEVEIDYKDLFPNSTHIELSDYSSKEAEADMNNYNIDYQ 58
PQ T +E FQ D EN I K + + I++ + + K+ NN++IDY
Sbjct: 632 PQIEQTEKIFTMESFQQDTSENNEIILCKRINKYTVQIQIKEETFKDVLDIKNNFDIDYL 691

Query: 57 DAGCNDAPINHHQ 19
D +N +Q
Sbjct: 692 DEVRKKKFVNPYQ 704