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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915421
Clone id YMU001_000071_D04
Library
Length 284
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GATAGAAGTTATCAGAGCAATACATTATATGCAGTGCCAGCAGACTAACTCAATAGTCGA
GCTTGTTTTCGTTTTCAATTTGATCTTTATCGCATCTGATGTATGCAAAATGGTCAAACC
AGCGGGCATAGTATATGCACCCAGACCGTGGCTTAATTGGATGGCATTGCTCAAAGCAAC
AAGTGGCTGCCATGTGGGTGGCACGCCCCTTCCACCCTTCTCTCTCTCTCCCTCGTGACT
AATTGACACCACCTCTGTCAAGTGAGATCTACAGTCCCTATTGA
■■Homology search results ■■ -
sp_hit_id P06242
Definition sp|P06242|KIN28_YEAST Serine/threonine-protein kinase KIN28 OS=Saccharomyces cerevisiae
Align length 73
Score (bit) 33.9
E-value 0.26
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915421|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_D04.
         (284 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P06242|KIN28_YEAST Serine/threonine-protein kinase KIN28 OS=S...    34   0.26 
sp|Q03376|BAR3_CHITE Balbiani ring protein 3 OS=Chironomus tenta...    29   6.3  
sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related pr...    29   8.3  

>sp|P06242|KIN28_YEAST Serine/threonine-protein kinase KIN28
           OS=Saccharomyces cerevisiae GN=KIN28 PE=1 SV=1
          Length = 306

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
 Frame = +2

Query: 2   IEVIRAIHYMQCQQTNSIVELVFVF------NLI--FIASDVCKMVKPAGIVYAPRPWLN 157
           +  IR + Y+Q  Q  +++EL+ +F      NL+  F+ +D+  ++K   I++ P     
Sbjct: 49  MSAIREVKYLQEMQHPNVIELIDIFMAYDNLNLVLEFLPTDLEVVIKDKSILFTPADIKA 108

Query: 158 WMAL-LKATSGCH 193
           WM + L+    CH
Sbjct: 109 WMLMTLRGVYHCH 121


>sp|Q03376|BAR3_CHITE Balbiani ring protein 3 OS=Chironomus tentans
           GN=BR3 PE=2 SV=1
          Length = 1700

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -2

Query: 178 CFEQCHPIKPRSGCIYYARWFDHFAYIRCDKD 83
           C   C P KP+ GC    +W D     +C+K+
Sbjct: 705 CQCDCVPGKPKGGCTGAQKWCDKTCKCKCEKE 736


>sp|A2ARV4|LRP2_MOUSE Low-density lipoprotein receptor-related protein
            2 OS=Mus musculus GN=Lrp2 PE=1 SV=1
          Length = 4660

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
 Frame = -2

Query: 232  GREREGWKGRATHMAATCCFEQCHPI--KPRSGCIYYARWFDHFAYI 98
            GR+R+           T CFE    I   P+ G +Y+A W DH AYI
Sbjct: 3303 GRQRKMLAQHCVDANNTFCFENPRGIVLHPQRGYVYWADWGDH-AYI 3348
tr_hit_id B5VFG0
Definition tr|B5VFG0|B5VFG0_YEAS6 YDL108Wp-like protein OS=Saccharomyces cerevisiae (strain AWRI1631)
Align length 73
Score (bit) 33.9
E-value 4.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915421|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_D04.
         (284 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B5VFG0|B5VFG0_YEAS6 YDL108Wp-like protein OS=Saccharomyces ce...    34   4.2  
tr|B3LGZ9|B3LGZ9_YEAS1 Serine/threonine-protein kinase KIN28 OS=...    34   4.2  
tr|A7TJJ2|A7TJJ2_VANPO Putative uncharacterized protein OS=Vande...    34   4.2  
tr|A6ZXM1|A6ZXM1_YEAS7 Transcription initiation factor TFIIH sub...    34   4.2  
tr|Q6FR98|Q6FR98_CANGA Strain CBS138 chromosome H complete seque...    33   7.2  
tr|Q6BH55|Q6BH55_DEBHA DEHA2G21230p OS=Debaryomyces hansenii GN=...    33   7.2  

>tr|B5VFG0|B5VFG0_YEAS6 YDL108Wp-like protein OS=Saccharomyces
           cerevisiae (strain AWRI1631) GN=AWRI1631_41310 PE=4 SV=1
          Length = 258

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
 Frame = +2

Query: 2   IEVIRAIHYMQCQQTNSIVELVFVF------NLI--FIASDVCKMVKPAGIVYAPRPWLN 157
           +  IR + Y+Q  Q  +++EL+ +F      NL+  F+ +D+  ++K   I++ P     
Sbjct: 1   MSAIREVKYLQEMQHPNVIELIDIFMAYDNLNLVLEFLPTDLEVVIKDKSILFTPADIKA 60

Query: 158 WMAL-LKATSGCH 193
           WM + L+    CH
Sbjct: 61  WMLMTLRGVYHCH 73


>tr|B3LGZ9|B3LGZ9_YEAS1 Serine/threonine-protein kinase KIN28
           OS=Saccharomyces cerevisiae (strain RM11-1a)
           GN=SCRG_00603 PE=4 SV=1
          Length = 306

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
 Frame = +2

Query: 2   IEVIRAIHYMQCQQTNSIVELVFVF------NLI--FIASDVCKMVKPAGIVYAPRPWLN 157
           +  IR + Y+Q  Q  +++EL+ +F      NL+  F+ +D+  ++K   I++ P     
Sbjct: 49  MSAIREVKYLQEMQHPNVIELIDIFMAYDNLNLVLEFLPTDLEVVIKDKSILFTPADIKA 108

Query: 158 WMAL-LKATSGCH 193
           WM + L+    CH
Sbjct: 109 WMLMTLRGVYHCH 121


>tr|A7TJJ2|A7TJJ2_VANPO Putative uncharacterized protein
           OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
           70294) GN=Kpol_534p14 PE=4 SV=1
          Length = 339

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
 Frame = +2

Query: 2   IEVIRAIHYMQCQQTNSIVELVFVF------NLI--FIASDVCKMVKPAGIVYAPRPWLN 157
           +  IR + Y+Q  Q  +++ELV +F      NL+  F+ +D+  ++K   I++ P    +
Sbjct: 82  MSAIREVKYLQEIQHVNVIELVDIFMAYDNLNLVLEFLPTDLEVIIKDKNILFTPADIKS 141

Query: 158 WMAL-LKATSGCH 193
           WM + L+    CH
Sbjct: 142 WMLMTLRGVYHCH 154


>tr|A6ZXM1|A6ZXM1_YEAS7 Transcription initiation factor TFIIH
           subunit OS=Saccharomyces cerevisiae (strain YJM789)
           GN=KIN28 PE=4 SV=1
          Length = 306

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
 Frame = +2

Query: 2   IEVIRAIHYMQCQQTNSIVELVFVF------NLI--FIASDVCKMVKPAGIVYAPRPWLN 157
           +  IR + Y+Q  Q  +++EL+ +F      NL+  F+ +D+  ++K   I++ P     
Sbjct: 49  MSAIREVKYLQEMQHPNVIELIDIFMAYDNLNLVLEFLPTDLEVVIKDKSILFTPADIKA 108

Query: 158 WMAL-LKATSGCH 193
           WM + L+    CH
Sbjct: 109 WMLMTLRGVYHCH 121


>tr|Q6FR98|Q6FR98_CANGA Strain CBS138 chromosome H complete sequence
           OS=Candida glabrata GN=CAGL0H10318g PE=4 SV=1
          Length = 307

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 19/73 (26%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
 Frame = +2

Query: 2   IEVIRAIHYMQCQQTNSIVELVFVF------NLI--FIASDVCKMVKPAGIVYAPRPWLN 157
           +  IR + Y+Q  Q  +++ELV +F      NL+  ++ +D+  ++K   I++ P    +
Sbjct: 48  MSAIREVKYLQEMQHVNVIELVDIFMSYGNLNLVLEYLPTDLEVVIKDKSILFTPADIKS 107

Query: 158 WMAL-LKATSGCH 193
           WM + ++    CH
Sbjct: 108 WMLMSVRGVHHCH 120


>tr|Q6BH55|Q6BH55_DEBHA DEHA2G21230p OS=Debaryomyces hansenii
           GN=DEHA2G21230g PE=4 SV=2
          Length = 338

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
 Frame = +2

Query: 2   IEVIRAIHYMQCQQTNSIVELVFVFN--------LIFIASDVCKMVKPAGIVYAPRPWLN 157
           +  IR + Y+Q  +  +++ELV VF+        L F+  D+  ++K   IV+ P    +
Sbjct: 65  MSAIREVKYLQELRHPNVIELVDVFSTTNNLNLVLEFLPCDLEVLIKDTSIVFKPSDIKS 124

Query: 158 WMAL-LKATSGCH 193
           W+ + L+    CH
Sbjct: 125 WLLMTLRGIHHCH 137