BP915424
Clone id YMU001_000071_D07
Library
Length 241
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_D07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GAGTAGTTATCTCCACAGCAGAAACAGTATGGCGATAGAAGGATTTGACAGCCCACAAAG
TGAAACAATATCCCCTGCCCCAGCTGAATCCACAGGAACAATGGTTGTGCCCCTCTTTTT
CATAAGCTTCACCACCTTTCCCACTTCAATCACCTCCCCCCCTGAACCTTTCACACGAAG
CCCGTGCACTCTCTCTCCCACTCGCACTTGTCCTAGAAGCAATGCGTCCAGTCAATATTC
G
■■Homology search results ■■ -
sp_hit_id Q00174
Definition sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster
Align length 55
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915424|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_D07.
(241 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanog... 30 3.8

>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster
GN=LanA PE=1 SV=2
Length = 3712

Score = 30.0 bits (66), Expect = 3.8
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -1

Query: 232 TGRIASRTSASGRESARASCERFRXXXXXXXXXGEAYEKEGHNHCSCGFSWGRGY 68
TG A ++ +GR+ R + + ++ YEK+G C+C + RG+
Sbjct: 2032 TGHCACKSGVTGRQCDRCAVDHWK------------YEKDGCTPCNCNQGYSRGF 2074


tr_hit_id A7PJC5
Definition tr|A7PJC5|A7PJC5_VITVI Chromosome chr12 scaffold_18, whole genome shotgun sequence OS=Vitis vinifera
Align length 60
Score (bit) 63.5
E-value 5.0e-09
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915424|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_D07.
(241 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7PJC5|A7PJC5_VITVI Chromosome chr12 scaffold_18, whole genom... 64 5e-09
tr|A5AF37|A5AF37_VITVI Putative uncharacterized protein OS=Vitis... 64 5e-09
tr|Q682V3|Q682V3_ARATH Putative GTP-binding protein OS=Arabidops... 61 3e-08
tr|Q56YJ4|Q56YJ4_ARATH Putative GTP-binding protein OS=Arabidops... 61 3e-08
tr|O82278|O82278_ARATH Putative GTP-binding protein OS=Arabidops... 61 3e-08
tr|B3LF44|B3LF44_ARATH At2g31060 OS=Arabidopsis thaliana PE=2 SV=1 61 3e-08
tr|Q5JMX4|Q5JMX4_ORYSJ Putative GTPase (Os01g0752700 protein) OS... 59 2e-07
tr|A2ZXW7|A2ZXW7_ORYSJ Putative uncharacterized protein OS=Oryza... 59 2e-07
tr|A2WV48|A2WV48_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07
tr|A9SXF4|A9SXF4_PHYPA Predicted protein OS=Physcomitrella paten... 56 8e-07
tr|Q0C599|Q0C599_HYPNA GTP-binding protein TypA OS=Hyphomonas ne... 36 1.1
tr|Q1GQR0|Q1GQR0_SPHAL GTP-binding protein TypA OS=Sphingopyxis ... 35 1.8
tr|A3WID2|A3WID2_9SPHN Membrane GTPase OS=Erythrobacter sp. NAP1... 34 3.1
tr|Q5PAJ9|Q5PAJ9_ANAMM GTP-binding protein OS=Anaplasma marginal... 34 4.1
tr|Q5NMG5|Q5NMG5_ZYMMO Membrane GTPase OS=Zymomonas mobilis GN=Z... 34 4.1
tr|A5V2W7|A5V2W7_SPHWW GTP-binding protein TypA OS=Sphingomonas ... 34 4.1
tr|Q1NFC8|Q1NFC8_9SPHN GTP-binding protein TypA OS=Sphingomonas ... 34 4.1
tr|A6C4I2|A6C4I2_9PLAN Putative uncharacterized protein OS=Planc... 34 4.1
tr|A8JAY4|A8JAY4_CHLRE Elongation factor-like protein (Fragment)... 34 4.1
tr|Q2N8U5|Q2N8U5_ERYLH Membrane GTPase OS=Erythrobacter litorali... 33 5.4
tr|Q0BQ84|Q0BQ84_GRABC GTP-binding protein TypA/BipA OS=Granulib... 33 5.4
tr|B7RH70|B7RH70_9RHOB GTP-binding protein TypA/BipA OS=Roseobac... 33 5.4
tr|Q13DA2|Q13DA2_RHOPS GTP-binding protein TypA OS=Rhodopseudomo... 32 5.5
tr|Q2CCZ0|Q2CCZ0_9RHOB EF-Tu; elongation factor Tu OS=Oceanicola... 33 7.0
tr|A1B997|A1B997_PARDP GTP-binding protein TypA OS=Paracoccus de... 33 9.1
tr|Q1YDW0|Q1YDW0_MOBAS GTP-binding protein TypA OS=Manganese-oxi... 33 9.1

>tr|A7PJC5|A7PJC5_VITVI Chromosome chr12 scaffold_18, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00018683001
PE=4 SV=1
Length = 669

Score = 63.5 bits (153), Expect = 5e-09
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = -2

Query: 213 GQVRVGERVHGLRXXXXXXXXXXXXXXXKLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSI 34
G +RVG+RVHGLR KLMKK+GT +V +DSAGAGDI+S+ GL++PSI
Sbjct: 288 GVIRVGDRVHGLRSTDSGVEKIEEGKVLKLMKKKGTNMVLIDSAGAGDIISMAGLTSPSI 347


>tr|A5AF37|A5AF37_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_004501 PE=4 SV=1
Length = 618

Score = 63.5 bits (153), Expect = 5e-09
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = -2

Query: 213 GQVRVGERVHGLRXXXXXXXXXXXXXXXKLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSI 34
G +RVG+RVHGLR KLMKK+GT +V +DSAGAGDI+S+ GL++PSI
Sbjct: 291 GVIRVGDRVHGLRSTDSGVEKIEEGKVLKLMKKKGTNMVLIDSAGAGDIISMAGLTSPSI 350


>tr|Q682V3|Q682V3_ARATH Putative GTP-binding protein OS=Arabidopsis
thaliana GN=At2g31060 PE=2 SV=1
Length = 667

Score = 60.8 bits (146), Expect = 3e-08
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -2

Query: 213 GQVRVGERVHGLRXXXXXXXXXXXXXXXKLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSI 34
G VRVG+RV+GLR KLMKK+GTTIV +D+AGAGDI+ + GL+ PSI
Sbjct: 286 GVVRVGDRVNGLRKTDSGSEKIEEAKVVKLMKKKGTTIVSIDAAGAGDIICMAGLTAPSI 345


>tr|Q56YJ4|Q56YJ4_ARATH Putative GTP-binding protein OS=Arabidopsis
thaliana GN=At2g31060 PE=2 SV=1
Length = 668

Score = 60.8 bits (146), Expect = 3e-08
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -2

Query: 213 GQVRVGERVHGLRXXXXXXXXXXXXXXXKLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSI 34
G VRVG+RV+GLR KLMKK+GTTIV +D+AGAGDI+ + GL+ PSI
Sbjct: 287 GVVRVGDRVNGLRKTDSGSEKIEEAKVVKLMKKKGTTIVSIDAAGAGDIICMAGLTAPSI 346


>tr|O82278|O82278_ARATH Putative GTP-binding protein OS=Arabidopsis
thaliana GN=At2g31060 PE=4 SV=1
Length = 664

Score = 60.8 bits (146), Expect = 3e-08
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -2

Query: 213 GQVRVGERVHGLRXXXXXXXXXXXXXXXKLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSI 34
G VRVG+RV+GLR KLMKK+GTTIV +D+AGAGDI+ + GL+ PSI
Sbjct: 283 GVVRVGDRVNGLRKTDSGSEKIEEAKVVKLMKKKGTTIVSIDAAGAGDIICMAGLTAPSI 342


>tr|B3LF44|B3LF44_ARATH At2g31060 OS=Arabidopsis thaliana PE=2 SV=1
Length = 527

Score = 60.8 bits (146), Expect = 3e-08
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = -2

Query: 213 GQVRVGERVHGLRXXXXXXXXXXXXXXXKLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSI 34
G VRVG+RV+GLR KLMKK+GTTIV +D+AGAGDI+ + GL+ PSI
Sbjct: 146 GVVRVGDRVNGLRKTDSGSEKIEEAKVVKLMKKKGTTIVSIDAAGAGDIICMAGLTAPSI 205


>tr|Q5JMX4|Q5JMX4_ORYSJ Putative GTPase (Os01g0752700 protein)
OS=Oryza sativa subsp. japonica GN=P0435B05.25 PE=4 SV=1
Length = 673

Score = 58.5 bits (140), Expect = 2e-07
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = -2

Query: 213 GQVRVGERVHGLRXXXXXXXXXXXXXXXKLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSI 34
G VRVG++VHGLR KLMKK+GT++V V++AGAGDI+S+ GL+ P+I
Sbjct: 291 GVVRVGDKVHGLRSTDDGVQKIEDGKVVKLMKKKGTSMVIVEAAGAGDIISMAGLAAPAI 350


>tr|A2ZXW7|A2ZXW7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_003389 PE=4 SV=1
Length = 661

Score = 58.5 bits (140), Expect = 2e-07
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = -2

Query: 213 GQVRVGERVHGLRXXXXXXXXXXXXXXXKLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSI 34
G VRVG++VHGLR KLMKK+GT++V V++AGAGDI+S+ GL+ P+I
Sbjct: 291 GVVRVGDKVHGLRSTDDGVQKIEDGKVVKLMKKKGTSMVIVEAAGAGDIISMAGLAAPAI 350


>tr|A2WV48|A2WV48_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_03761 PE=4 SV=1
Length = 664

Score = 58.5 bits (140), Expect = 2e-07
Identities = 30/60 (50%), Positives = 41/60 (68%)
Frame = -2

Query: 213 GQVRVGERVHGLRXXXXXXXXXXXXXXXKLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSI 34
G VRVG++VHGLR KLMKK+GT++V V++AGAGDI+S+ GL+ P+I
Sbjct: 291 GVVRVGDKVHGLRSTDDGVQKIEDGKVVKLMKKKGTSMVIVEAAGAGDIISMAGLAAPAI 350


>tr|A9SXF4|A9SXF4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_216713 PE=4 SV=1
Length = 668

Score = 56.2 bits (134), Expect = 8e-07
Identities = 33/61 (54%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = -2

Query: 213 GQVRVGERVHGLRXXXXXXXXXXXXXXXK-LMKKRGTTIVPVDSAGAGDIVSLCGLSNPS 37
G VRVG+R+HGLR LMKK G T V V+SAGAGDIVS+ GLS PS
Sbjct: 285 GVVRVGDRIHGLRSGEANTSVAFDEGKVIKLMKKNGMTSVLVNSAGAGDIVSIAGLSEPS 344

Query: 36 I 34
I
Sbjct: 345 I 345