BP915425
Clone id YMU001_000071_D08
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GACAGAAAATGAGCTGTAGTTCAAAAATCAACACCACCCAATTACAATATATGTAATACA
AGTCCTTCAACAAGCTATATTAGGTTCTGTTTCGTGAGCACATAAGCAGTGCCTGTATCA
CCAACTATAGTAGCTTCTGTTTCATGCGCACATAAGCAGTGTGTAAATCACCAAAATTCA
GAACAAGCATTGCACAAGCCAGTCTTTTACATTTTGAGATAGGAGTTAATCCTGCCGTAC
GGCTCCTGTACGAGCACGACTTTCATAGTGACTAGAGGCCAGATGAAGTCTTCTAACACG
TGTTGACATCACACTCTCTACTGGTTCAGGGAAAGTCTTGCCATTGAACCGCCCTTTCGG
TTGTAAGAACGACCCTGCAGACGGCCGCCATGCTTCTCTACTCCTTGTTTGCACATAAGT
TCCTACATTATTGGAGGCATCTTGTTTGAGCGACTTGATTGAATCACCTCGCGTAGTGGC
CTCTGGTTGATGACGATAATTGCGGCTTCTAGAGCAATAAATGGA
■■Homology search results ■■ -
sp_hit_id Q7NCW2
Definition sp|Q7NCW2|ACCA_GLOVI Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha OS=Gloeobacter violaceus
Align length 51
Score (bit) 31.2
E-value 3.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915425|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_D08.
(525 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7NCW2|ACCA_GLOVI Acetyl-coenzyme A carboxylase carboxyl tran... 31 3.1
sp|Q9PUQ1|PEA3_DANRE ETS domain-containing transcription factor ... 30 9.2

>sp|Q7NCW2|ACCA_GLOVI Acetyl-coenzyme A carboxylase carboxyl
transferase subunit alpha OS=Gloeobacter violaceus
GN=accA PE=3 SV=1
Length = 326

Score = 31.2 bits (69), Expect = 3.1
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = -2

Query: 479 PLREVIQSSRSNKMPPIM*--ELMCKQGVEKHGGRLQGRSYNRKGGSMARL 333
P ++++Q +R+ K P + +L+C+ VE HG RL G GG +ARL
Sbjct: 63 PPKDILQLARNPKRPSTLDYIQLLCEDWVELHGDRLFGDDLALVGG-LARL 112


>sp|Q9PUQ1|PEA3_DANRE ETS domain-containing transcription factor
PEA3 OS=Danio rerio GN=pea3 PE=1 SV=2
Length = 494

Score = 29.6 bits (65), Expect = 9.2
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1

Query: 112 PVSPTIVASVSCAHKQCVNHQNSEQALHKPVF 207
P SP S SC+HKQ ++ N EQ L+ +
Sbjct: 98 PQSPGSDPSQSCSHKQSFSYPNGEQCLYASAY 129


tr_hit_id A5FGU1
Definition tr|A5FGU1|A5FGU1_FLAJ1 Oligopeptidase B OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
Align length 92
Score (bit) 33.9
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915425|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_D08.
(525 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5FGU1|A5FGU1_FLAJ1 Oligopeptidase B OS=Flavobacterium johnso... 34 5.2
tr|Q24CQ6|Q24CQ6_TETTH Putative uncharacterized protein OS=Tetra... 33 8.6

>tr|A5FGU1|A5FGU1_FLAJ1 Oligopeptidase B OS=Flavobacterium
johnsoniae (strain ATCC 17061 / DSM 2064 / UW101)
GN=Fjoh_2556 PE=4 SV=1
Length = 686

Score = 33.9 bits (76), Expect = 5.2
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Frame = -1

Query: 498 YRHQPEATTRGDSI--KSLKQDASNNVGTYVQT-----------RSREAWRPSAGSFLQP 358
Y Q E T R D I L D++++V Y +T +SR+ S+GS L
Sbjct: 189 YTKQDEVTLRADKIFRHKLNTDSASDVLVYNETDDTFNVSVNKEKSRKYIVISSGSTLTT 248

Query: 357 KGRFNGKTFPEPVESVMSTRVRRLHLASSHYE 262
+ R P+ V RVR L + SHYE
Sbjct: 249 EYRILNSDNPDGEFEVFQPRVRGLEYSISHYE 280


>tr|Q24CQ6|Q24CQ6_TETTH Putative uncharacterized protein
OS=Tetrahymena thermophila SB210 GN=TTHERM_01354220 PE=4
SV=1
Length = 97

Score = 33.1 bits (74), Expect = 8.6
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +3

Query: 24 KINTTQLQYM*YKSFNKLY*VLFREHISSACITNYSSFCFMRT*AVCKSPKFRTSIAQ 197
KIN QL Y N+ + ++F E +++A +TN+ SF + V ++ FRT Q
Sbjct: 5 KINAEQLSYEKIGRCNQYFRIIFEEKLNNAELTNFLSFTYK---IVARNQYFRTIFEQ 59