BP915426
Clone id YMU001_000071_D09
Library
Length 335
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_D09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACAATCTACTCCTCTTAGGAATACTTTANGTTCCTTTCCATCCAGAATTTCCAGCACTTT
AGATTGGAGTCCCTACAAAAACCACTGCCATTAGACTGCATCCACAAGCAGAGACATGAC
TTCCAAAGCATGATGAGCAAAAATATGGAACTAAAGAAAAGAATCAGACTCTATGTATGC
CCCTCGACAATTATGAGTTGTCTCAGATTTAATTTGCACATGCAGTGATCTCAAACCAGT
GTGTGTGACCAGAATGGTTGGTAACACATAAATTCAAACCTTAAGGGCTTGTACGTACTG
AAATTTGATCACCATGATCTCTGTCATCACAACTT
■■Homology search results ■■ -
sp_hit_id Q9FL92
Definition sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=Arabidopsis thaliana
Align length 23
Score (bit) 30.0
E-value 3.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915426|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_D09.
(335 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16 OS=A... 30 3.8
sp|P16641|SMC7_SCHMA ATP:guanidino kinase SMC74 OS=Schistosoma m... 30 3.8
sp|P28776|I23O_MOUSE Indoleamine 2,3-dioxygenase OS=Mus musculus... 30 4.9

>sp|Q9FL92|WRK16_ARATH Probable WRKY transcription factor 16
OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1
Length = 1372

Score = 30.0 bits (66), Expect = 3.8
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1

Query: 119 SCLCLWMQSNGSGFCRDSNLKCW 51
SC+C W G R+ NL CW
Sbjct: 933 SCVCKWKNKEGHSHRREINLHCW 955


>sp|P16641|SMC7_SCHMA ATP:guanidino kinase SMC74 OS=Schistosoma
mansoni PE=2 SV=1
Length = 675

Score = 30.0 bits (66), Expect = 3.8
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +1

Query: 40 IQNFQHFRLESLQKPLPLDCIHKQRHDFQSMMSKNMELKKRIRL---YVCPSTIMSCLRF 210
I H R+ S+QK L ++K+ D +SK+++ RL CPS + + LR
Sbjct: 219 INEEDHIRVISMQKGRDLIAVYKRLADAIQELSKSLKFAFNDRLGFITFCPSNLGTTLRA 278

Query: 211 NLH 219
++H
Sbjct: 279 SVH 281


>sp|P28776|I23O_MOUSE Indoleamine 2,3-dioxygenase OS=Mus musculus
GN=Indo PE=1 SV=1
Length = 407

Score = 29.6 bits (65), Expect = 4.9
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +1

Query: 91 LDCIHKQRHDFQSMMSKNMELKKRIRLYVCPSTIMSCLRFNL 216
L + K HD + + K E+ KR+R +V P T LR L
Sbjct: 197 LKALEKALHDIATSLEKAKEIFKRMRDFVDPDTFFHVLRIYL 238


tr_hit_id Q0HJT6
Definition tr|Q0HJT6|Q0HJT6_SHESM NUDIX hydrolase OS=Shewanella sp. (strain MR-4)
Align length 40
Score (bit) 32.7
E-value 9.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915426|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_D09.
(335 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0HJT6|Q0HJT6_SHESM NUDIX hydrolase OS=Shewanella sp. (strain... 33 9.4

>tr|Q0HJT6|Q0HJT6_SHESM NUDIX hydrolase OS=Shewanella sp. (strain
MR-4) GN=Shewmr4_1604 PE=3 SV=1
Length = 163

Score = 32.7 bits (73), Expect = 9.4
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1

Query: 61 RLESLQKPLPLDCIHKQRHDFQSMMSKNMELKKRIRLYVC 180
++E L+ PL LDC+ RH Q + ++EL RL C
Sbjct: 122 KMEQLRSPLVLDCLRDYRHQQQQEQTYSLELLNSQRLTGC 161