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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915430
Clone id YMU001_000071_E01
Library
Length 298
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTGGGCTGATATCCACATCATACTGATAGATATTGTCACCAGGATGGAGAGTCACTTC
GAAATGATTAGCCCGAACTTTGATAGCTTGCCCTGTGCTTCCAGCAAGCGGCCTTTGTGG
AGCAACTAGCTTGAAGGAGGAGGGTATTGTGGACGATCGCACCTCTTTTGAACAAATAGC
AGACATGCCCCCTTTATCGACCCTCATGGTCAAGCATTCATCTATTGCAGATGTACAAGG
ACCTTGAGATATTTCTTCATACATCCCTAAGCGAGAAAATCCTGGAAGGAGCTCACCC
■■Homology search results ■■ -
sp_hit_id Q8CJF8
Definition sp|Q8CJF8|I2C4_MOUSE Eukaryotic translation initiation factor 2C 4 OS=Mus musculus
Align length 40
Score (bit) 43.1
E-value 0.0004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915430|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_E01.
         (298 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8CJF8|I2C4_MOUSE Eukaryotic translation initiation factor 2C...    43   4e-04
sp|Q9HCK5|I2C4_HUMAN Eukaryotic translation initiation factor 2C...    43   4e-04
sp|Q9QZ81|I2C2_RAT Eukaryotic translation initiation factor 2C 2...    43   6e-04
sp|Q8CJG0|I2C2_MOUSE Eukaryotic translation initiation factor 2C...    43   6e-04
sp|Q8CJG1|I2C1_MOUSE Eukaryotic translation initiation factor 2C...    43   6e-04
sp|Q9UL18|I2C1_HUMAN Eukaryotic translation initiation factor 2C...    43   6e-04
sp|Q9SJK3|AGOL_ARATH Argonaute-like protein At2g27880 OS=Arabido...    42   0.001
sp|Q9H9G7|I2C3_HUMAN Eukaryotic translation initiation factor 2C...    39   0.011
sp|O04379|AGO1_ARATH Protein argonaute OS=Arabidopsis thaliana G...    38   0.014
sp|Q8CJF9|I2C3_MOUSE Eukaryotic translation initiation factor 2C...    38   0.018
sp|Q9JMB7|PIWL1_MOUSE Piwi-like protein 1 OS=Mus musculus GN=Piw...    35   0.090
sp|Q96J94|PIWL1_HUMAN Piwi-like protein 1 OS=Homo sapiens GN=PIW...    34   0.20 
sp|Q7Z3Z3|PIWL3_HUMAN Piwi-like protein 3 OS=Homo sapiens GN=PIW...    32   1.00 
sp|Q8UVX0|PIWI_DANRE Piwi-like protein 1 OS=Danio rerio GN=piwil...    30   3.8  
sp|Q96AY4|TTC28_HUMAN Tetratricopeptide repeat protein 28 OS=Hom...    30   5.0  

>sp|Q8CJF8|I2C4_MOUSE Eukaryotic translation initiation factor 2C 4
           OS=Mus musculus GN=Eif2c4 PE=2 SV=2
          Length = 861

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 19/40 (47%), Positives = 29/40 (72%)
 Frame = -2

Query: 120 PQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISPK 1
           P+RP  G+ G+ I++ ANHF+V + P  ++Y YDVDI P+
Sbjct: 16  PRRPGLGTVGKPIRLLANHFQVQI-PKIDVYHYDVDIKPE 54


>sp|Q9HCK5|I2C4_HUMAN Eukaryotic translation initiation factor 2C 4
           OS=Homo sapiens GN=EIF2C4 PE=1 SV=2
          Length = 861

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 19/40 (47%), Positives = 29/40 (72%)
 Frame = -2

Query: 120 PQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISPK 1
           P+RP  G+ G+ I++ ANHF+V + P  ++Y YDVDI P+
Sbjct: 16  PRRPGLGTVGKPIRLLANHFQVQI-PKIDVYHYDVDIKPE 54


>sp|Q9QZ81|I2C2_RAT Eukaryotic translation initiation factor 2C 2
           OS=Rattus norvegicus GN=Eif2c2 PE=2 SV=2
          Length = 860

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 24/64 (37%), Positives = 37/64 (57%)
 Frame = -2

Query: 192 GGMSAICSKEVRSSTIPSSFKLVAPQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVD 13
           G    + S    +S IP  +    P RP  G+TG+ IK++AN FE+ + P  +IY Y++D
Sbjct: 4   GAGPVLASPAPTTSPIPG-YAFKPPPRPDFGTTGRTIKLQANFFEMDI-PKIDIYHYELD 61

Query: 12  ISPK 1
           I P+
Sbjct: 62  IKPE 65


>sp|Q8CJG0|I2C2_MOUSE Eukaryotic translation initiation factor 2C 2
           OS=Mus musculus GN=Eif2c2 PE=1 SV=2
          Length = 860

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 24/64 (37%), Positives = 37/64 (57%)
 Frame = -2

Query: 192 GGMSAICSKEVRSSTIPSSFKLVAPQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVD 13
           G    + S    +S IP  +    P RP  G+TG+ IK++AN FE+ + P  +IY Y++D
Sbjct: 4   GAGPVLASPAPTTSPIPG-YAFKPPPRPDFGTTGRTIKLQANFFEMDI-PKIDIYHYELD 61

Query: 12  ISPK 1
           I P+
Sbjct: 62  IKPE 65


>sp|Q8CJG1|I2C1_MOUSE Eukaryotic translation initiation factor 2C 1
           OS=Mus musculus GN=Eif2c1 PE=2 SV=1
          Length = 857

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 20/40 (50%), Positives = 29/40 (72%)
 Frame = -2

Query: 123 APQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISP 4
           AP+RP  G+ G+ IK+ AN+FEV + P  ++Y Y+VDI P
Sbjct: 23  APRRPGIGTVGKPIKLLANYFEVDI-PKIDVYHYEVDIKP 61


>sp|Q9UL18|I2C1_HUMAN Eukaryotic translation initiation factor 2C 1
           OS=Homo sapiens GN=EIF2C1 PE=1 SV=3
          Length = 857

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 20/40 (50%), Positives = 29/40 (72%)
 Frame = -2

Query: 123 APQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISP 4
           AP+RP  G+ G+ IK+ AN+FEV + P  ++Y Y+VDI P
Sbjct: 23  APRRPGIGTVGKPIKLLANYFEVDI-PKIDVYHYEVDIKP 61


>sp|Q9SJK3|AGOL_ARATH Argonaute-like protein At2g27880
           OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1
          Length = 997

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
 Frame = -2

Query: 171 SKEVRSSTIPSSFKLVA-PQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISPK 1
           +K   +S  P+S K V  P RP  G+ G+ + VRANHF V +   D +Y YDV I+P+
Sbjct: 130 TKPEMTSLPPASSKAVTFPVRPGRGTLGKKVMVRANHFLVQVADRD-LYHYDVSINPE 186


>sp|Q9H9G7|I2C3_HUMAN Eukaryotic translation initiation factor 2C 3
           OS=Homo sapiens GN=EIF2C3 PE=2 SV=2
          Length = 860

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 19/42 (45%), Positives = 29/42 (69%)
 Frame = -2

Query: 129 LVAPQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISP 4
           L+ P+RP  G+ G+ IK+ AN F+V + P  ++Y Y+VDI P
Sbjct: 15  LMVPRRPGYGTMGKPIKLLANCFQVEI-PKIDVYLYEVDIKP 55


>sp|O04379|AGO1_ARATH Protein argonaute OS=Arabidopsis thaliana
           GN=AGO1 PE=2 SV=1
          Length = 1048

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = -2

Query: 147 IPSSFKLVA-PQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISPK 1
           IPSS K    P RP  G +G+   V+ANHF   L P  +++ YDV I+P+
Sbjct: 170 IPSSSKAFKFPMRPGKGQSGKRCIVKANHFFAEL-PDKDLHHYDVTITPE 218


>sp|Q8CJF9|I2C3_MOUSE Eukaryotic translation initiation factor 2C 3
           OS=Mus musculus GN=Eif2c3 PE=2 SV=1
          Length = 860

 Score = 37.7 bits (86), Expect = 0.018
 Identities = 18/41 (43%), Positives = 28/41 (68%)
 Frame = -2

Query: 126 VAPQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISP 4
           + P+RP  G+ G+ IK+ AN F+V + P  ++Y Y+VDI P
Sbjct: 16  IVPRRPGYGTMGKPIKLLANCFQVEI-PKIDVYLYEVDIKP 55
tr_hit_id Q6Z4F1
Definition tr|Q6Z4F1|Q6Z4F1_ORYSJ Os07g0188000 protein OS=Oryza sativa subsp. japonica
Align length 49
Score (bit) 47.8
E-value 0.0003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915430|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_E01.
         (298 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6Z4F1|Q6Z4F1_ORYSJ Os07g0188000 protein OS=Oryza sativa subs...    48   3e-04
tr|B8B7Y0|B8B7Y0_ORYSI Putative uncharacterized protein OS=Oryza...    48   3e-04
tr|A9NJ57|A9NJ57_PENMO Argonaute 1 isoform A OS=Penaeus monodon ...    48   3e-04
tr|B4KTB5|B4KTB5_DROMO GI18445 OS=Drosophila mojavensis GN=GI184...    46   8e-04
tr|Q8CGT8|Q8CGT8_MOUSE Argonaute 4 protein OS=Mus musculus GN=Ei...    46   0.001
tr|A7SCI6|A7SCI6_NEMVE Predicted protein (Fragment) OS=Nematoste...    45   0.001
tr|B0CXE0|B0CXE0_LACBS Argonaute-like protein OS=Laccaria bicolo...    45   0.001
tr|Q071E1|Q071E1_PENMO Argonaute OS=Penaeus monodon PE=2 SV=1          44   0.003
tr|A9NJ58|A9NJ58_PENMO Argonaute 1 isoform B OS=Penaeus monodon ...    44   0.003
tr|A8WKF9|A8WKF9_CAEBR Putative uncharacterized protein OS=Caeno...    44   0.003
tr|B4LJF3|B4LJF3_DROVI GJ21530 OS=Drosophila virilis GN=GJ21530 ...    44   0.004
tr|B2RFN1|B2RFN1_OIKDI Argonaute 2 OS=Oikopleura dioica GN=ago2 ...    44   0.004
tr|B7Q811|B7Q811_IXOSC Translation initiation factor 2C, putativ...    43   0.007
tr|A8P168|A8P168_BRUMA Argonaute 2, putative OS=Brugia malayi GN...    43   0.007
tr|A7MD27|A7MD27_HUMAN Eukaryotic translation initiation factor ...    43   0.007
tr|Q4KLV6|Q4KLV6_XENLA MGC114859 protein OS=Xenopus laevis GN=ei...    43   0.009
tr|B0F0Y5|B0F0Y5_9TELE Argonaute 2 OS=Gobiocypris rarus GN=AGO2 ...    43   0.009
tr|Q8CGU0|Q8CGU0_MOUSE Argonaute 1 protein (Fragment) OS=Mus mus...    43   0.009
tr|A2VDG1|A2VDG1_MOUSE Eif2c1 protein (Fragment) OS=Mus musculus...    43   0.009
tr|A1L365|A1L365_MOUSE Eukaryotic translation initiation factor ...    43   0.009
tr|A1A563|A1A563_MOUSE Eukaryotic translation initiation factor ...    43   0.009
tr|B2RAD8|B2RAD8_HUMAN cDNA, FLJ94852, highly similar to Homo sa...    43   0.009
tr|B1B5A8|B1B5A8_DAUCA Argonaute1 OS=Daucus carota PE=2 SV=1           42   0.012
tr|B4JW20|B4JW20_DROGR GH22955 OS=Drosophila grimshawi GN=GH2295...    42   0.012
tr|A8X4Z3|A8X4Z3_CAEBR CBR-ALG-1 protein OS=Caenorhabditis brigg...    42   0.012
tr|Q8CGT9|Q8CGT9_MOUSE Argonaute 2 protein (Fragment) OS=Mus mus...    42   0.015
tr|Q7Y001|Q7Y001_ORYSJ Putative leaf development and shoot apica...    42   0.015
tr|Q10F40|Q10F40_ORYSJ Piwi domain containing protein, expressed...    42   0.015
tr|A3ALG5|A3ALG5_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.015
tr|A2XKQ7|A2XKQ7_ORYSI Putative uncharacterized protein OS=Oryza...    42   0.015

>tr|Q6Z4F1|Q6Z4F1_ORYSJ Os07g0188000 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0084L07.14 PE=2 SV=1
          Length = 1052

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = -2

Query: 147 IPSSFKLVAP-QRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISP 4
           IP S K VAP  RP  G+ G+ I VRANHF V +   D IY YDV +SP
Sbjct: 183 IPVSSKGVAPPSRPGFGTVGERIVVRANHFLVRVSDNDMIYLYDVSLSP 231


>tr|B8B7Y0|B8B7Y0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25183 PE=4 SV=1
          Length = 1021

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
 Frame = -2

Query: 147 IPSSFKLVAP-QRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISP 4
           IP S K VAP  RP  G+ G+ I VRANHF V +   D IY YDV +SP
Sbjct: 183 IPVSSKGVAPPSRPGFGTVGERIVVRANHFLVRVSDNDMIYLYDVSLSP 231


>tr|A9NJ57|A9NJ57_PENMO Argonaute 1 isoform A OS=Penaeus monodon
           PE=2 SV=1
          Length = 942

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
 Frame = -2

Query: 243 GPCTSAIDECL-TMRVDKG-GMSAICSKEVRSSTIPSSFKLVAPQRPLAGSTGQAIKVRA 70
           GP T+ + +   T  V  G GM+A+   E     +P++   VAP+RP  G  G+ I +RA
Sbjct: 45  GPITTIVPQAPGTPAVATGTGMTALLPPE-----LPNTPAFVAPRRPNLGREGRPITLRA 99

Query: 69  NHFEVTLHPGDNIYQYDVDISP 4
           NHF++++ P   I+ YD+ I+P
Sbjct: 100 NHFQISM-PRGYIHHYDISITP 120


>tr|B4KTB5|B4KTB5_DROMO GI18445 OS=Drosophila mojavensis GN=GI18445
           PE=4 SV=1
          Length = 986

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 24/63 (38%), Positives = 36/63 (57%)
 Frame = -2

Query: 192 GGMSAICSKEVRSSTIPSSFKLVAPQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVD 13
           G  +AI +  V  +T P       P+RP  G  G+ I +RANHF+VT+ P   ++ YD++
Sbjct: 114 GVSAAIAAAAVSPTTQPDMPVFTCPRRPNLGREGRPIVLRANHFQVTM-PRGFVHHYDIN 172

Query: 12  ISP 4
           I P
Sbjct: 173 IQP 175


>tr|Q8CGT8|Q8CGT8_MOUSE Argonaute 4 protein OS=Mus musculus
           GN=Eif2c4 PE=2 SV=1
          Length = 1112

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
 Frame = -2

Query: 267 GMYEEISQGPCTSAI--DEC-LTMRVDKGGMSAICS------------KEVRSSTIPSSF 133
           G+YEE+  G     +   EC   + +   G   +CS            K V  +  P + 
Sbjct: 99  GLYEEVRLGERAKLLWTGECGPALHLGGSGELLLCSELVPLWLPVAVIKIVTKNLGPPAS 158

Query: 132 KLVAPQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISPK 1
               P+RP  G+ G+ I++ ANHF+V + P  ++Y YDVDI P+
Sbjct: 159 LFQPPRRPGLGTVGKPIRLLANHFQVQI-PKIDVYHYDVDIKPE 201


>tr|A7SCI6|A7SCI6_NEMVE Predicted protein (Fragment) OS=Nematostella
           vectensis GN=v1g30450 PE=4 SV=1
          Length = 743

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 21/40 (52%), Positives = 29/40 (72%)
 Frame = -2

Query: 120 PQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDVDISPK 1
           P+RP  G  G+ IK+RAN F+VTL   D +Y YD++ISP+
Sbjct: 7   PKRPGYGREGRKIKLRANFFQVTLPNVDFLYHYDLEISPE 46


>tr|B0CXE0|B0CXE0_LACBS Argonaute-like protein OS=Laccaria bicolor
           (strain S238N-H82) GN=AGO16205 PE=4 SV=1
          Length = 921

 Score = 45.4 bits (106), Expect = 0.001
 Identities = 28/64 (43%), Positives = 36/64 (56%)
 Frame = -2

Query: 195 KGGMSAICSKEVRSSTIPSSFKLVAPQRPLAGSTGQAIKVRANHFEVTLHPGDNIYQYDV 16
           +GG +A  S  V S +I +S   V  +R   G+ G+ I VR N FE T+  G  IY YDV
Sbjct: 22  RGGGAARESTRVDSPSIAASVSTVGVKRSGTGTAGRKIAVRVNAFETTVQEGF-IYHYDV 80

Query: 15  DISP 4
           DI P
Sbjct: 81  DIIP 84


>tr|Q071E1|Q071E1_PENMO Argonaute OS=Penaeus monodon PE=2 SV=1
          Length = 939

 Score = 44.3 bits (103), Expect = 0.003
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
 Frame = -2

Query: 243 GPCTSAIDECL-TMRVDKG-GMSAICSKEVRSSTIPSSFKLVAPQRPLAGSTGQAIKVRA 70
           GP T+ + +   T  V  G GM+A+   E+ +         VAP+RP  G  G+ I +RA
Sbjct: 45  GPITTIVPQAPGTPAVATGTGMTALLPPELPT--------FVAPRRPNLGREGRPITLRA 96

Query: 69  NHFEVTLHPGDNIYQYDVDISP 4
           NHF++++ P   I+ YD+ I+P
Sbjct: 97  NHFQISM-PRGYIHHYDISITP 117


>tr|A9NJ58|A9NJ58_PENMO Argonaute 1 isoform B OS=Penaeus monodon
           PE=2 SV=1
          Length = 939

 Score = 44.3 bits (103), Expect = 0.003
 Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
 Frame = -2

Query: 243 GPCTSAIDECL-TMRVDKG-GMSAICSKEVRSSTIPSSFKLVAPQRPLAGSTGQAIKVRA 70
           GP T+ + +   T  V  G GM+A+   E+ +         VAP+RP  G  G+ I +RA
Sbjct: 45  GPITTIVPQAPGTPAVATGTGMTALLPPELPT--------FVAPRRPNLGREGRPITLRA 96

Query: 69  NHFEVTLHPGDNIYQYDVDISP 4
           NHF++++ P   I+ YD+ I+P
Sbjct: 97  NHFQISM-PRGYIHHYDISITP 117


>tr|A8WKF9|A8WKF9_CAEBR Putative uncharacterized protein
           OS=Caenorhabditis briggsae GN=CBG24316 PE=4 SV=2
          Length = 905

 Score = 44.3 bits (103), Expect = 0.003
 Identities = 27/68 (39%), Positives = 37/68 (54%)
 Frame = -2

Query: 207 MRVDKGGMSAICSKEVRSSTIPSSFKLVAPQRPLAGSTGQAIKVRANHFEVTLHPGDNIY 28
           +RVD G  S   +  + S    S  +   P+RP  G  G+AI +RANHF V + PG NI 
Sbjct: 28  LRVDGGSPSEAEATSLESQG-RSGVQFRCPRRPNHGVDGRAILLRANHFSVRI-PGGNIQ 85

Query: 27  QYDVDISP 4
            Y V++ P
Sbjct: 86  HYHVEVMP 93