BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915434|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_E05.
         (285 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6NKG5|RTL1_HUMAN Retrotransposon-like protein 1 OS=Homo sapi...    31   2.2  
sp|Q52QI2|RTL1_BOVIN Retrotransposon-like protein 1 OS=Bos tauru...    29   8.3  
sp|Q03145|EPHA2_MOUSE Ephrin type-A receptor 2 OS=Mus musculus G...    29   8.3  
sp|Q91694|EPA4B_XENLA Ephrin type-A receptor 4-B OS=Xenopus laev...    29   8.3  
sp|Q91845|EPA4A_XENLA Ephrin type-A receptor 4-A OS=Xenopus laev...    29   8.3  

>sp|A6NKG5|RTL1_HUMAN Retrotransposon-like protein 1 OS=Homo sapiens
           GN=RTL1 PE=3 SV=2
          Length = 1359

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 256 GNQGMQVHFLLPSENQLKGRCTAAASEPIFSCFRQSAICLVLCLHEMS 113
           G + ++VH   P  + +KGRCT  +   + +CFR    C+ L  H MS
Sbjct: 506 GIRWLRVH--APEVDWIKGRCTFHSPYCLKNCFRPPPPCIALERHGMS 551


>sp|Q52QI2|RTL1_BOVIN Retrotransposon-like protein 1 OS=Bos taurus
           GN=RTL1 PE=2 SV=2
          Length = 1331

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 256 GNQGMQVHFLLPSENQLKGRCTAAASEPIFSCFRQSAICLVLCLHEMS 113
           G + +Q+H   P  + +KGRCT  +   + +CFR    C+ L  H +S
Sbjct: 491 GIKWLQLH--APEIDWVKGRCTFHSPYCLKNCFRPPPPCIALEHHAVS 536


>sp|Q03145|EPHA2_MOUSE Ephrin type-A receptor 2 OS=Mus musculus
           GN=Epha2 PE=1 SV=2
          Length = 977

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -2

Query: 212 SVEGSLHCSCQRAYFFMFPAVCNMSCTMP 126
           S EG+  C C+  YF       +MSCT P
Sbjct: 301 STEGATSCQCEEGYFRAPEDPLSMSCTRP 329


>sp|Q91694|EPA4B_XENLA Ephrin type-A receptor 4-B OS=Xenopus laevis
           GN=epha4-B PE=2 SV=1
          Length = 985

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 206 EGSLHCSCQRAYFFMFPAVCNMSCTMP 126
           EGS  C+C R YF       +M CT P
Sbjct: 302 EGSTSCTCDRGYFRADTDPASMPCTRP 328


>sp|Q91845|EPA4A_XENLA Ephrin type-A receptor 4-A OS=Xenopus laevis
           GN=epha4-A PE=2 SV=1
          Length = 986

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -2

Query: 206 EGSLHCSCQRAYFFMFPAVCNMSCTMP 126
           EGS  C+C R YF       +M CT P
Sbjct: 302 EGSTSCTCDRGYFRADTDPASMPCTRP 328

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915434|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_E05.
         (285 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******