BP915440
Clone id YMU001_000071_E12
Library
Length 459
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_E12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AACATACAAGAGGCAAACTTCTTTTCAATCAAGAATCTAGAGGATCAAAAGTCTCTTCTT
CTCTACCATCCAGATACCAGCAAGTTTATCAAGTCCTTTCATACATAGAAATTTCAGAAG
AGCCTCAAAGATGATGTTTGTCGCTTTCATGAGCTCCACCATGAACGACAGAACATGCTC
TAGACTGGCTTTAGATCATAAAAAAACAATTTTGAAAACGCTTACCAGTTAAGAAATTCA
AAACCCTTGAAAGCCAACGATAGCGCTGGTATGGCGCTTGCTGGATCAAAAGCTGTGAAT
AAATTAAAATGCCAGATCATCACCCCAGTTGAGAGGGATCCAAAAATTCCAATGAATCTT
CGCAACATGGTCCATATCAAGGACATGTTTTGACAGGTATGCAACACTGGGTAAGATAAC
CCAAAGAAAAGAGACACTCACCTGTGTGTAGCTAAGTTC
■■Homology search results ■■ -
sp_hit_id P41774
Definition sp|P41774|COX1_MYTED Cytochrome c oxidase subunit 1 OS=Mytilus edulis
Align length 101
Score (bit) 29.3
E-value 8.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915440|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_E12.
(459 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P41774|COX1_MYTED Cytochrome c oxidase subunit 1 OS=Mytilus e... 29 8.6

>sp|P41774|COX1_MYTED Cytochrome c oxidase subunit 1 OS=Mytilus
edulis GN=COI PE=3 SV=2
Length = 551

Score = 29.3 bits (64), Expect = 8.6
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Frame = -2

Query: 425 FGLSYPVLHTCQNMSLIWTMLRRFIGIFGSLSTGVMIWHFNLFTA---------FDPASA 273
FG+ V+ C ++ ++ + G G M+W ++FT F A+
Sbjct: 269 FGVMSKVIMHCSGKEAVFGLIGMVYAMIGIGGLGCMVWAHHMFTVGLNVDTRGYFSTATM 328

Query: 272 IPALSLAFKGFEFLNW*AFSKLFFYDLKPV*SMFCRSWWSS 150
+ A+ K F +L A SK + +KP ++WS+
Sbjct: 329 VIAVPTGVKVFSWLATMAGSK---FKMKPA------AYWST 360


tr_hit_id Q0W286
Definition tr|Q0W286|Q0W286_UNCMA Adenylosuccinate lyase OS=Uncultured methanogenic archaeon RC-I
Align length 58
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP915440|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_E12.
(459 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q0W286|Q0W286_UNCMA Adenylosuccinate lyase OS=Uncultured meth... 33 5.4
tr|Q2LQG9|Q2LQG9_SYNAS Anti-sigma factor antagonist OS=Syntrophu... 33 7.1
tr|Q8ILQ6|Q8ILQ6_PLAF7 Putative uncharacterized protein OS=Plasm... 33 9.2
tr|A4RMW1|A4RMW1_MAGGR Putative uncharacterized protein OS=Magna... 33 9.2

>tr|Q0W286|Q0W286_UNCMA Adenylosuccinate lyase OS=Uncultured
methanogenic archaeon RC-I GN=purB PE=4 SV=1
Length = 450

Score = 33.5 bits (75), Expect = 5.4
Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Frame = +2

Query: 41 RIKSLFFSTIQIPA-SLSSPFIHRNFRRASKMMFVAFMSSTMNDRTCSRLALDHKKTI 211
RIK L S + IPA ++SS I R+ R A MMF+A ++ST+ D+ C + L + I
Sbjct: 206 RIKELTMSYLGIPAVTVSSQIIQRD-RHAEYMMFLAGVASTL-DKICLEIRLMQRSEI 261


>tr|Q2LQG9|Q2LQG9_SYNAS Anti-sigma factor antagonist OS=Syntrophus
aciditrophicus (strain SB) GN=SYNAS_04910 PE=3 SV=1
Length = 194

Score = 33.1 bits (74), Expect = 7.1
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +2

Query: 23 FQSRI*RIKSLFFSTIQIPASLSSPFIHRNFRRASKMMFVAFMSSTMNDRTCSRLALDHK 202
F+ R RI LF +P S PF HR F+R+S + + M+ + C ++ H
Sbjct: 2 FRMRHYRISFLFMHHNHLP---SMPFAHRWFKRSSASLCIHLMAIIRPRKACENVSEMHI 58

Query: 203 KTIL 214
+T+L
Sbjct: 59 RTLL 62


>tr|Q8ILQ6|Q8ILQ6_PLAF7 Putative uncharacterized protein OS=Plasmodium
falciparum (isolate 3D7) GN=PF14_0188 PE=4 SV=1
Length = 2184

Score = 32.7 bits (73), Expect = 9.2
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Frame = +1

Query: 34 NLEDQKSLLLYHPDTSKFIKSFHT*KFQKSLKDDV-CRFHELHHERQNML*TGFRS*KNN 210
++E+Q S Y P+ IKS + K+ K +KD + + + N+ G KNN
Sbjct: 1666 DMEEQLSTESYFPNMDSLIKSLNFVKW-KEIKDHMNVNKNVSTNTNINVDKNGLS--KNN 1722

Query: 211 FENAYQLRNSKPLKANDSA--GMALAGSKAVNKLKCQIITPVERDPKIPMNLRNMVHIKD 384
+++ L N+ + +ND++ G K K K + T + D + N+ N + D
Sbjct: 1723 DDSSIGLSNTNHILSNDNSEKGKENQKKKEKTKKKTETDTDTDTDTETKKNISNEENSGD 1782

Query: 385 MF*QVCN 405
+ +CN
Sbjct: 1783 VKNNICN 1789


>tr|A4RMW1|A4RMW1_MAGGR Putative uncharacterized protein
OS=Magnaporthe grisea GN=MGG_04521 PE=4 SV=1
Length = 555

Score = 32.7 bits (73), Expect = 9.2
Identities = 20/92 (21%), Positives = 39/92 (42%)
Frame = +1

Query: 115 QKSLKDDVCRFHELHHERQNML*TGFRS*KNNFENAYQLRNSKPLKANDSAGMALAGSKA 294
Q S+KD + R+ H + TG R + + + R+S P AG+A+
Sbjct: 421 QDSIKDKMMRYEGHSHAETIEMLTGLRYKEGERTHGFTSRDSNPTLTKGDAGIAI----- 475

Query: 295 VNKLKCQIITPVERDPKIPMNLRNMVHIKDMF 390
P++RDP++ + + V + + +
Sbjct: 476 ----------PIDRDPRVGADKKKKVKVAEEY 497