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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915454
Clone id YMU001_000071_G04
Library
Length 505
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGAACACATTCTTTGAGGGCTCTCATTTTTTTGGAAAAGGTGGAGACTGTCTCTCGTGGG
TTGTTCTAGAGCCAACATGGTGGCTATGCTCACGTTCTGTCGTTGTGGGTTGTGGCTTCC
ACTGGAAGAGTGGGCGAAAGTGGCAGAGCTTCCTCCCTTTGTGGGAAATTAAGGACTATT
AGGTTTAGGTTATGAAAGCCCATTAGCAAACAACACGAATCACACAATGTAAGGAATCAA
TATGAAGACAAAGAAAATGAGATTACCAATGTGCAAATGGACTTAAAAGAAAACGAACAT
GGGAAATATATATATTTTTTTGGCATTATAAAGTCACCAATAGATTCGTAATGGGACGTT
TGATAAGCCCTATCTTAATTGGCCATCCGTGTGACTGGACCCTTGAGTCCCTTGAGTCCC
TCGGAACAATACATAACATCTTGTAATAGGGAAAGCCTAGGAGTGGTAGTGATTTTTCTG
CCAAGCAGATAACGTGCAATCCTAT
■■Homology search results ■■ -
sp_hit_id Q9UJX0
Definition sp|Q9UJX0|OSGI1_HUMAN Oxidative stress-induced growth inhibitor 1 OS=Homo sapiens
Align length 28
Score (bit) 30.4
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915454|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_G04.
         (505 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UJX0|OSGI1_HUMAN Oxidative stress-induced growth inhibitor ...    30   4.9  
sp|P07834|CDC4_YEAST Cell division control protein 4 OS=Saccharo...    30   6.4  

>sp|Q9UJX0|OSGI1_HUMAN Oxidative stress-induced growth inhibitor 1
           OS=Homo sapiens GN=OSGIN1 PE=2 SV=2
          Length = 560

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = -3

Query: 488 LLGRKITTTPRLSLL-QDVMYCSEGLKG 408
           LL RK+T  P +S+L QD+ Y SEGL+G
Sbjct: 135 LLQRKLTEAPGVSILDQDLDYLSEGLEG 162


>sp|P07834|CDC4_YEAST Cell division control protein 4
           OS=Saccharomyces cerevisiae GN=CDC4 PE=1 SV=2
          Length = 779

 Score = 30.0 bits (66), Expect = 6.4
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -3

Query: 194 HNLNLIVLNFPQREEALPLSPTLPVEATT 108
           +N+N   +N P  E ALPLSPT     TT
Sbjct: 166 NNVNSATINNPMEEGALPLSPTASSPGTT 194
tr_hit_id Q54XT0
Definition tr|Q54XT0|Q54XT0_DICDI Cyclin-like F-box containing protein OS=Dictyostelium discoideum
Align length 49
Score (bit) 38.9
E-value 0.14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915454|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_G04.
         (505 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q54XT0|Q54XT0_DICDI Cyclin-like F-box containing protein OS=D...    39   0.14 
tr|A4H555|A4H555_LEIBR Lipoate-protein ligase-like (Lipoyl ligas...    33   5.8  
tr|A5D1N2|A5D1N2_PELTS Predicted metal-dependent hydrolase OS=Pe...    33   6.0  
tr|Q4QII0|Q4QII0_LEIMA Lipoate-protein ligase-like (Lipoyl ligas...    33   9.9  

>tr|Q54XT0|Q54XT0_DICDI Cyclin-like F-box containing protein
           OS=Dictyostelium discoideum GN=DDB_0206178 PE=4 SV=1
          Length = 636

 Score = 38.9 bits (89), Expect = 0.14
 Identities = 22/49 (44%), Positives = 29/49 (59%)
 Frame = +1

Query: 202 ISKQHESHNVRNQYEDKENEITNVQMDLKENEHGKYIYFFGIIKSPIDS 348
           I+K +  +N  N  + KENE+ N   D+  NE   YIYF+ I KS IDS
Sbjct: 134 INKSNIHNNTNNNNKQKENEVDNDISDIICNE---YIYFYNISKSVIDS 179


>tr|A4H555|A4H555_LEIBR Lipoate-protein ligase-like (Lipoyl ligase,
           putative) (Lipoyltransferase, putative) (Lipoate
           biosynthesis protein, putative) OS=Leishmania
           braziliensis GN=LbrM07_V2.1130 PE=4 SV=1
          Length = 705

 Score = 33.5 bits (75), Expect = 5.8
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = +3

Query: 357 RLISPILIGHPCDWTLESLESLGTI 431
           R +S +L+GH CD  +E LESLG I
Sbjct: 633 RYLSALLVGHACDAAVEGLESLGDI 657


>tr|A5D1N2|A5D1N2_PELTS Predicted metal-dependent hydrolase
           OS=Pelotomaculum thermopropionicum (strain DSM 13744 /
           JCM 10971 / SI) GN=PTH_1688 PE=4 SV=1
          Length = 290

 Score = 33.5 bits (75), Expect = 6.0
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = +2

Query: 26  FFWKRWRLS-----LVGCSRANMVAMLTFCRCGLWLPLE 127
           FFWK W LS     L G   A M+ + +   CG+ LPLE
Sbjct: 26  FFWKEWGLSGSNRALKGVDAAIMLVLDSHAHCGMTLPLE 64


>tr|Q4QII0|Q4QII0_LEIMA Lipoate-protein ligase-like (Lipoyl ligase,
           putative) (Lipoyltransferase, putative) (Lipoate
           biosynthesis protein, putative) OS=Leishmania major
           GN=LmjF07.1060 PE=4 SV=1
          Length = 513

 Score = 32.7 bits (73), Expect = 9.9
 Identities = 12/23 (52%), Positives = 17/23 (73%)
 Frame = +3

Query: 357 RLISPILIGHPCDWTLESLESLG 425
           R +S +L+GHPCD  +E LE +G
Sbjct: 441 RYLSALLVGHPCDAAIEGLECVG 463