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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915459
Clone id YMU001_000071_G10
Library
Length 566
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000071_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCACCCACGTCGTGCAGACTCTCTTGCACTACTACCCAACACCCATAACCCATCTCTCGA
CCTCTGCGTAAGCTCTTTTTCAAGACCCAACTCCGCGGTTCTCCTTCTGCTCTACGTGCC
TCACACTCAGAGAGAGAGAGCGAGAGAGAGAGAGAGCCATGGCTTCCTTCAAGATTACCC
TCTCCTTCTCCCTTCTCTCTCTTCTGATCATCTTCATCTCTGTGGCAAATGCACAACCGT
CTGCCAGCCCTGCGTCCGAGCCCACTAGCGATGGCTCAAACATCGACCTCGGCATCGCAT
ACACACTCATGTTCGCGGCGTTGGCGGTCACTTACCTGATGCACCCAATTGATGCTTTCC
CATTCAACTTGTTCTGAGGGTACACAGCAAAGAGAGCTCATTGTCTGCATTACATCACCC
ATTTGTGATGTTTTTCTAGTCTTTGTTTGGGATCTCCATCATCACACATTCTTTTGCCCA
TAATTCTTCTGCCCATTCCTTTAACAGCTTCCAAGTACTTGTGGCCTTGTAGTTGACATC
AAGAAGGGCTGGACCCTGCTTTCTTT
■■Homology search results ■■ -
sp_hit_id Q9M373
Definition sp|Q9M373|AGP20_ARATH Arabinogalactan peptide 20 OS=Arabidopsis thaliana
Align length 44
Score (bit) 56.2
E-value 1.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915459|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_G10.
         (566 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9M373|AGP20_ARATH Arabinogalactan peptide 20 OS=Arabidopsis ...    56   1e-07
sp|O82337|AGP16_ARATH Arabinogalactan peptide 16 OS=Arabidopsis ...    56   1e-07
sp|Q9FK16|AGP22_ARATH Arabinogalactan peptide 22 OS=Arabidopsis ...    51   5e-06

>sp|Q9M373|AGP20_ARATH Arabinogalactan peptide 20 OS=Arabidopsis
           thaliana GN=AGP20 PE=3 SV=1
          Length = 74

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +3

Query: 225 ANAQPSASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDA 356
           A AQ S +PA  PTSDG++ID GIAY LM  AL +TYL+HP+DA
Sbjct: 24  AGAQ-SLAPAPSPTSDGTSIDQGIAYLLMVVALVLTYLIHPLDA 66


>sp|O82337|AGP16_ARATH Arabinogalactan peptide 16 OS=Arabidopsis
           thaliana GN=AGP16 PE=1 SV=1
          Length = 73

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 28/45 (62%), Positives = 35/45 (77%)
 Frame = +3

Query: 222 VANAQPSASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDA 356
           +A AQ S +PA  PTSDG++ID GIAY LM  AL +TYL+HP+DA
Sbjct: 23  LAGAQ-SLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIHPLDA 66


>sp|Q9FK16|AGP22_ARATH Arabinogalactan peptide 22 OS=Arabidopsis
           thaliana GN=AGP22 PE=3 SV=1
          Length = 63

 Score = 50.8 bits (120), Expect = 5e-06
 Identities = 23/35 (65%), Positives = 28/35 (80%)
 Frame = +3

Query: 240 SASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMH 344
           S+SPA  PTSDG++ID GIAY LM  ALA+TY +H
Sbjct: 29  SSSPAPAPTSDGTSIDQGIAYVLMMVALALTYFIH 63
tr_hit_id A9NL94
Definition tr|A9NL94|A9NL94_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 50
Score (bit) 72.8
E-value 1.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915459|Adiantum capillus-veneris mRNA, clone:
YMU001_000071_G10.
         (566 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NL94|A9NL94_PICSI Putative uncharacterized protein OS=Picea...    73   1e-11
tr|B6TQ77|B6TQ77_MAIZE AGP16 OS=Zea mays PE=4 SV=1                     60   8e-08
tr|B6SR56|B6SR56_MAIZE AGP16 OS=Zea mays PE=4 SV=1                     60   8e-08
tr|B6SMF8|B6SMF8_MAIZE AGP16 OS=Zea mays PE=4 SV=1                     60   8e-08
tr|Q94DB9|Q94DB9_ORYSJ cDNA clone:002-150-C11, full insert seque...    59   1e-07
tr|A5BTA7|A5BTA7_VITVI Putative uncharacterized protein (Chromos...    59   1e-07
tr|A2WTE3|A2WTE3_ORYSI Putative uncharacterized protein OS=Oryza...    59   1e-07
tr|B8B358|B8B358_ORYSI Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|A9PBL3|A9PBL3_POPTR Putative uncharacterized protein OS=Popul...    58   3e-07
tr|B6SPA0|B6SPA0_MAIZE AGP20 OS=Zea mays PE=4 SV=1                     58   4e-07
tr|B4FIH4|B4FIH4_MAIZE Putative uncharacterized protein OS=Zea m...    58   4e-07
tr|Q8S344|Q8S344_CAPAN Putative uncharacterized protein upa9 OS=...    57   5e-07
tr|Q6ETY5|Q6ETY5_ORYSJ Os02g0264800 protein OS=Oryza sativa subs...    57   5e-07
tr|A2X375|A2X375_ORYSI Putative uncharacterized protein OS=Oryza...    57   5e-07
tr|Q6I5W4|Q6I5W4_ORYSJ Os05g0217000 protein OS=Oryza sativa subs...    56   2e-06
tr|A2Y1M8|A2Y1M8_ORYSI Putative uncharacterized protein OS=Oryza...    56   2e-06
tr|A5AM00|A5AM00_VITVI Putative uncharacterized protein (Chromos...    52   2e-05
tr|Q8L9T8|Q8L9T8_ARATH Putative uncharacterized protein (At5g241...    52   3e-05
tr|B6T2G3|B6T2G3_MAIZE AGP16 OS=Zea mays PE=4 SV=1                     52   3e-05
tr|B4FD31|B4FD31_MAIZE Putative uncharacterized protein OS=Zea m...    52   3e-05
tr|A9PA79|A9PA79_POPTR Putative uncharacterized protein OS=Popul...    52   3e-05
tr|A5B2M5|A5B2M5_VITVI Putative uncharacterized protein OS=Vitis...    50   1e-04
tr|A9NR89|A9NR89_PICSI Putative uncharacterized protein OS=Picea...    49   1e-04
tr|B6T179|B6T179_MAIZE AGP16 OS=Zea mays PE=4 SV=1                     48   4e-04
tr|Q6H8D2|Q6H8D2_ORYSJ Putative uncharacterized protein OJ1006_A...    42   0.018
tr|A2X2A7|A2X2A7_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.089
tr|Q5ZD40|Q5ZD40_ORYSJ Putative uncharacterized protein P0710A02...    37   0.98 
tr|A2WS21|A2WS21_ORYSI Putative uncharacterized protein OS=Oryza...    37   0.98 
tr|B8AB42|B8AB42_ORYSI Putative uncharacterized protein OS=Oryza...    35   2.2  
tr|A3B0K5|A3B0K5_ORYSJ Putative uncharacterized protein OS=Oryza...    35   2.9  

>tr|A9NL94|A9NL94_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=4 SV=1
          Length = 73

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 35/50 (70%), Positives = 42/50 (84%)
 Frame = +3

Query: 225 ANAQPSASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDAFPFNLF 374
           ANAQ   +PA  PTSDG++ID GIAY LMF ALA+TYL+HP+DAFP+NLF
Sbjct: 27  ANAQ---APAPAPTSDGTSIDQGIAYVLMFLALALTYLIHPLDAFPYNLF 73


>tr|B6TQ77|B6TQ77_MAIZE AGP16 OS=Zea mays PE=4 SV=1
          Length = 76

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +3

Query: 231 AQPSASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDA-FPFNLF 374
           A  + +PA  PTSDG++IDLGIAY LM  AL +TYL+HP+DA  P+ LF
Sbjct: 28  AAAAQAPAPAPTSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 76


>tr|B6SR56|B6SR56_MAIZE AGP16 OS=Zea mays PE=4 SV=1
          Length = 73

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +3

Query: 231 AQPSASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDA-FPFNLF 374
           A  + +PA  PTSDG++IDLGIAY LM  AL +TYL+HP+DA  P+ LF
Sbjct: 25  AAAAQAPAPAPTSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 73


>tr|B6SMF8|B6SMF8_MAIZE AGP16 OS=Zea mays PE=4 SV=1
          Length = 75

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 29/49 (59%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
 Frame = +3

Query: 231 AQPSASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDA-FPFNLF 374
           A  + +PA  PTSDG++IDLGIAY LM  AL +TYL+HP+DA  P+ LF
Sbjct: 27  AAAAQAPAPAPTSDGTSIDLGIAYILMLVALVLTYLIHPLDASSPYKLF 75


>tr|Q94DB9|Q94DB9_ORYSJ cDNA clone:002-150-C11, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0694A04.20 PE=4 SV=1
          Length = 69

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +3

Query: 222 VANAQPSASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDA 356
           + NAQ   +PA  PTSDG+++D GIAY LMF ALA+TYL+HP+DA
Sbjct: 21  LVNAQ---APAPAPTSDGTSVDQGIAYVLMFVALALTYLIHPLDA 62


>tr|A5BTA7|A5BTA7_VITVI Putative uncharacterized protein (Chromosome
           chr15 scaffold_40, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00026982001 PE=4 SV=1
          Length = 75

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 30/50 (60%), Positives = 36/50 (72%)
 Frame = +3

Query: 225 ANAQPSASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDAFPFNLF 374
           A AQ SA PA  PTSDG+ ID GIAY LM  AL +TYL+HP+DA  ++ F
Sbjct: 27  ARAQSSA-PAPAPTSDGTAIDQGIAYVLMLVALVLTYLIHPLDASSYSFF 75


>tr|A2WTE3|A2WTE3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03127 PE=4 SV=1
          Length = 69

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +3

Query: 222 VANAQPSASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDA 356
           + NAQ   +PA  PTSDG+++D GIAY LMF ALA+TYL+HP+DA
Sbjct: 21  LVNAQ---APAPAPTSDGTSVDQGIAYVLMFVALALTYLIHPLDA 62


>tr|B8B358|B8B358_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_23127 PE=4 SV=1
          Length = 77

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
 Frame = +3

Query: 231 AQPSASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDA-FPFNLF 374
           A P+  PA  P+SDG++ID GIAY LM  AL +TYL+HP+DA  P+ LF
Sbjct: 29  AAPAQPPAPAPSSDGTSIDQGIAYVLMLVALVLTYLIHPLDASSPYKLF 77


>tr|A9PBL3|A9PBL3_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=4 SV=1
          Length = 76

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = +3

Query: 240 SASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDAFPFNLF 374
           S +PA  PTSDG++ID GIAY LM  AL +TYL+HP+DA  +  F
Sbjct: 32  SPAPAPAPTSDGTSIDQGIAYLLMLVALVLTYLIHPLDASSYTFF 76


>tr|B6SPA0|B6SPA0_MAIZE AGP20 OS=Zea mays PE=4 SV=1
          Length = 72

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 29/51 (56%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
 Frame = +3

Query: 225 ANAQPSASPASEPTSDGSNIDLGIAYTLMFAALAVTYLMHPIDA-FPFNLF 374
           A A  + +PA  PTSDG++ID GIAY LM  AL +TYL+HP+DA  P+ LF
Sbjct: 22  AVAAAAQAPAPAPTSDGTSIDQGIAYLLMIMALVLTYLIHPLDASAPYKLF 72