BP915467 |
Clone id |
YMU001_000071_H10 |
Library |
YMU01 |
Length |
313 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000071_H10. |
Accession |
BP915467 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGCTCCACTTTACTATTTAAGATATGTTCTTCAAAAACTTTCTTCAAATCTATAGCCAAT TCAATATCAGACTTGAGTTTATACGAGGGCCCTTTAGGCTTACCTTGCTTCTTGTCCTTC GGAGCTTCTTCCATAACCACCTCCGGAGCAGGTTTAGGAGCTAGCCCTTCTTCTTTCTTA TTGCTGGATCTCGTCTGCCTTTTTGATGTCCCAGTCACCTCTTCATCTCTTTTCCGCTTC TCTTCCACCATAGCTTCATTCGCTTGAGCTTTAGCAATATAATCATATACCGAAAGAGAA TCCACTGGATCAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P14317 |
Definition |
sp|P14317|HCLS1_HUMAN Hematopoietic lineage cell-specific protein OS=Homo sapiens |
Align length |
45 |
Score (bit) |
31.6 |
E-value |
1.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RIL3 |
Definition |
tr|A9RIL3|A9RIL3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
107 |
Score (bit) |
76.3 |
E-value |
7.0e-13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915467|Adiantum capillus-veneris mRNA, clone: YMU001_000071_H10. (313 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RIL3|A9RIL3_PHYPA Predicted protein OS=Physcomitrella paten... 76 7e-13 tr|A9T007|A9T007_PHYPA Predicted protein OS=Physcomitrella paten... 75 1e-12 tr|A9S8Q5|A9S8Q5_PHYPA Predicted protein OS=Physcomitrella paten... 74 4e-12 tr|A9RDL6|A9RDL6_PHYPA Predicted protein OS=Physcomitrella paten... 73 8e-12 tr|A9T5Y3|A9T5Y3_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11 tr|A9TXL8|A9TXL8_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11 tr|A9T0D0|A9T0D0_PHYPA Predicted protein OS=Physcomitrella paten... 72 1e-11 tr|A9SMK9|A9SMK9_PHYPA Predicted protein OS=Physcomitrella paten... 72 2e-11 tr|A9S5J0|A9S5J0_PHYPA Predicted protein OS=Physcomitrella paten... 72 2e-11 tr|A9RID4|A9RID4_PHYPA Predicted protein OS=Physcomitrella paten... 72 2e-11 tr|A9TRB2|A9TRB2_PHYPA Predicted protein OS=Physcomitrella paten... 71 2e-11 tr|A9TBB3|A9TBB3_PHYPA Predicted protein OS=Physcomitrella paten... 71 2e-11 tr|A9SXA4|A9SXA4_PHYPA Predicted protein OS=Physcomitrella paten... 71 2e-11 tr|A9SX98|A9SX98_PHYPA Predicted protein OS=Physcomitrella paten... 71 2e-11 tr|A9RYE5|A9RYE5_PHYPA Predicted protein OS=Physcomitrella paten... 71 2e-11 tr|A9RB92|A9RB92_PHYPA Predicted protein OS=Physcomitrella paten... 71 2e-11 tr|A9U2C8|A9U2C8_PHYPA Predicted protein OS=Physcomitrella paten... 71 3e-11 tr|A9TWB1|A9TWB1_PHYPA Predicted protein OS=Physcomitrella paten... 71 3e-11 tr|A9TDC5|A9TDC5_PHYPA Predicted protein OS=Physcomitrella paten... 71 3e-11 tr|A9SZM8|A9SZM8_PHYPA Predicted protein OS=Physcomitrella paten... 71 3e-11 tr|A9SZL6|A9SZL6_PHYPA Predicted protein OS=Physcomitrella paten... 71 3e-11 tr|A9S169|A9S169_PHYPA Predicted protein OS=Physcomitrella paten... 71 3e-11 tr|A9TXN8|A9TXN8_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11 tr|A9TQD3|A9TQD3_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11 tr|A9TCZ6|A9TCZ6_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11 tr|A9TAT3|A9TAT3_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11 tr|A9SW82|A9SW82_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11 tr|A9SW80|A9SW80_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11 tr|A9SUE6|A9SUE6_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11 tr|A9S8X0|A9S8X0_PHYPA Predicted protein OS=Physcomitrella paten... 70 4e-11
>tr|A9RIL3|A9RIL3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_66618 PE=4 SV=1 Length = 316
Score = 76.3 bits (186), Expect = 7e-13 Identities = 49/107 (45%), Positives = 64/107 (59%), Gaps = 4/107 (3%) Frame = -3
Query: 311 DPVDSLSVYDYIAKAQANEAMVEEKRKRDEEVT---GTSKRQTRSSNKKEEGLAPKPAPE 141 DPV+SLSV+ YIAK+Q +EA++EEKR+ + + T +SKRQTR +E L P + Sbjct: 72 DPVESLSVHAYIAKSQ-HEALMEEKRRGNFDDTREGNSSKRQTRGDKAREAALQELPVKD 130
Query: 140 VVME-EAXXXXXXXXXXXPSYKLKSDIELAIDLKKVFEEHILNSKVE 3 E +YKL SDIE A +LK V EEHILN+KVE Sbjct: 131 TSASLEVKPREIKDKGKSIAYKLLSDIEAATNLKGVLEEHILNAKVE 177
>tr|A9T007|A9T007_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_86296 PE=4 SV=1 Length = 406
Score = 75.5 bits (184), Expect = 1e-12 Identities = 45/103 (43%), Positives = 60/103 (58%) Frame = -3
Query: 311 DPVDSLSVYDYIAKAQANEAMVEEKRKRDEEVTGTSKRQTRSSNKKEEGLAPKPAPEVVM 132 DPVD LSV+ +IA++Q EA++EEKR+RDE G SKR TR +++ + + Sbjct: 78 DPVDRLSVHAHIARSQY-EALIEEKRRRDENNVGPSKRITRGEKARQQKNSIHEETVESI 136
Query: 131 EEAXXXXXXXXXXXPSYKLKSDIELAIDLKKVFEEHILNSKVE 3 +YKL+SDIE A DLKKV EE IL+ KVE Sbjct: 137 STKERKIGKEKAKALAYKLQSDIEAATDLKKVLEERILSGKVE 179
>tr|A9S8Q5|A9S8Q5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_76055 PE=4 SV=1 Length = 515
Score = 73.9 bits (180), Expect = 4e-12 Identities = 49/113 (43%), Positives = 69/113 (61%), Gaps = 10/113 (8%) Frame = -3
Query: 311 DPVDSLSVYDYIAKAQANEAMVEEKRKRDEEVTGTSKRQTRSSNKKE----------EGL 162 D VD LSV+ +IA++Q +EA++EEKR+RDE G SKR TR ++ E + Sbjct: 333 DLVDRLSVHAHIARSQ-HEALIEEKRRRDENQEGPSKRITRGDKTRQQKNPMHEESIEKI 391
Query: 161 APKPAPEVVMEEAXXXXXXXXXXXPSYKLKSDIELAIDLKKVFEEHILNSKVE 3 + K E+V E+A +YKL+SDIE+AIDLKKV EE IL+ K++ Sbjct: 392 STKEK-EIVKEKAKVP---------AYKLQSDIEVAIDLKKVLEEQILSEKIK 434
>tr|A9RDL6|A9RDL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_64679 PE=4 SV=1 Length = 908
Score = 72.8 bits (177), Expect = 8e-12 Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 4/107 (3%) Frame = -3
Query: 311 DPVDSLSVYDYIAKAQANEAMVEEKRKRDEEVT---GTSKRQTRSSNKKEEGLAPKPAPE 141 DPV+SLSV+ YIAK+Q +EA++EEKR+R+ + T +SKRQTR +E P + Sbjct: 418 DPVESLSVHAYIAKSQ-HEALMEEKRRRNFDDTREGNSSKRQTRGDKAREAASKELPVKD 476
Query: 140 VVME-EAXXXXXXXXXXXPSYKLKSDIELAIDLKKVFEEHILNSKVE 3 E +YKL SDIE A +LK+V +E ILN+KVE Sbjct: 477 TSASLEEKTRETKDKGKSIAYKLLSDIEAATNLKEVLKERILNAKVE 523
Score = 48.1 bits (113), Expect = 2e-04 Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 3/50 (6%) Frame = -3
Query: 311 DPVDSLSVYDYIAKAQANEAMVEEKRKRDEEVT---GTSKRQTRSSNKKE 171 DPV+SLSV+ YIAK+Q +EA++EEKR+R+ + T +SKRQTR +E Sbjct: 289 DPVESLSVHAYIAKSQ-HEALMEEKRRRNFDDTREGNSSKRQTRGDKARE 337
>tr|A9T5Y3|A9T5Y3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_88510 PE=4 SV=1 Length = 555
Score = 72.4 bits (176), Expect = 1e-11 Identities = 46/107 (42%), Positives = 64/107 (59%), Gaps = 4/107 (3%) Frame = -3
Query: 311 DPVDSLSVYDYIAKAQANEAMVEEKRKRDEEVT---GTSKRQTRSSNKKEEGLAPKPAPE 141 DP++SLSV+ YIAK+Q +EA++EEKR+ + + T +SKRQT+ ++ P E Sbjct: 324 DPIESLSVHAYIAKSQ-HEALMEEKRRGNFDDTREGNSSKRQTQGDKARKAASQELPVKE 382
Query: 140 VVME-EAXXXXXXXXXXXPSYKLKSDIELAIDLKKVFEEHILNSKVE 3 E +YKL SDIE A +LK+V EEHILN+KVE Sbjct: 383 TSASLEEKTKETKDKGKSIAYKLLSDIEAATNLKEVLEEHILNAKVE 429
>tr|A9TXL8|A9TXL8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_98619 PE=4 SV=1 Length = 810
Score = 72.0 bits (175), Expect = 1e-11 Identities = 47/107 (43%), Positives = 63/107 (58%), Gaps = 4/107 (3%) Frame = -3
Query: 311 DPVDSLSVYDYIAKAQANEAMVEEKRKRDEEVT---GTSKRQTRSSNKKEEGLAPKPAPE 141 DPV+SLSV+ YIAK+Q +EA++EEKR+ + + T +SKRQTR +E P + Sbjct: 341 DPVESLSVHAYIAKSQ-HEALMEEKRRGNFDDTREGNSSKRQTRGDKAREAASQELPVKD 399
Query: 140 VVMEEAXXXXXXXXXXXP-SYKLKSDIELAIDLKKVFEEHILNSKVE 3 + +YKL SDIE A +LK V EEHILN+KVE Sbjct: 400 TLASLGEKTKETKDKGKSIAYKLLSDIEAATNLKGVLEEHILNAKVE 446
>tr|A9T0D0|A9T0D0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_86417 PE=4 SV=1 Length = 372
Score = 72.0 bits (175), Expect = 1e-11 Identities = 48/107 (44%), Positives = 63/107 (58%), Gaps = 4/107 (3%) Frame = -3
Query: 311 DPVDSLSVYDYIAKAQANEAMVEEKRKRDEEVT---GTSKRQTRSSNKKEEGLAPKPAPE 141 DPV+SLSV+ YIAK+Q +EA++EEKR+ + + T +SKRQTR +E P + Sbjct: 72 DPVESLSVHTYIAKSQ-HEALMEEKRRGNFDDTREGNSSKRQTRGDKAREAASQELPVKD 130
Query: 140 V-VMEEAXXXXXXXXXXXPSYKLKSDIELAIDLKKVFEEHILNSKVE 3 V E +YKL SDIE A +LK V EE ILN+KVE Sbjct: 131 TSVSLEEKTKETKDKGKSITYKLLSDIEAATNLKGVLEERILNAKVE 177
>tr|A9SMK9|A9SMK9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_81432 PE=4 SV=1 Length = 460
Score = 71.6 bits (174), Expect = 2e-11 Identities = 45/106 (42%), Positives = 62/106 (58%), Gaps = 3/106 (2%) Frame = -3
Query: 311 DPVDSLSVYDYIAKAQANEAMVEEKRKRDEEVTGTSKRQTRSSNKKEEGLAPKPAPEVVM 132 DP+D SV+ +IA++Q +EA++EEKR+RDE G SK+ TR +++ E +M Sbjct: 294 DPIDRPSVHAHIARSQ-HEALIEEKRRRDENNEGPSKKITRGEKARQQ---KNSIHEKIM 349
Query: 131 EEAXXXXXXXXXXXP---SYKLKSDIELAIDLKKVFEEHILNSKVE 3 E +YKL+SDIE A DLKKV EE IL+ KVE Sbjct: 350 ESISTKEREIRKEKTKAPAYKLQSDIEAATDLKKVLEERILSRKVE 395
>tr|A9S5J0|A9S5J0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_74864 PE=4 SV=1 Length = 595
Score = 71.6 bits (174), Expect = 2e-11 Identities = 50/109 (45%), Positives = 66/109 (60%), Gaps = 6/109 (5%) Frame = -3
Query: 311 DPVDSLSVYDYIAKAQANEAMVEEKRKRDEEVT---GTSKRQTRSSNKKE---EGLAPKP 150 DP+DSLSV+ YIAK+Q +EA++EEKR+R+ + T +SKRQTR +E + L+ K Sbjct: 240 DPIDSLSVHAYIAKSQ-HEALMEEKRRRNFDDTREGNSSKRQTRGDKAREATSQELSVKG 298
Query: 149 APEVVMEEAXXXXXXXXXXXPSYKLKSDIELAIDLKKVFEEHILNSKVE 3 + E +YKL SDIE A +LK V EE ILNSKVE Sbjct: 299 TSTSL--EKKTRETKDKGKSIAYKLLSDIEAATNLKGVLEERILNSKVE 345
>tr|A9RID4|A9RID4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_66531 PE=4 SV=1 Length = 396
Score = 71.6 bits (174), Expect = 2e-11 Identities = 43/103 (41%), Positives = 63/103 (61%) Frame = -3
Query: 311 DPVDSLSVYDYIAKAQANEAMVEEKRKRDEEVTGTSKRQTRSSNKKEEGLAPKPAPEVVM 132 +PV+ LSV+ +IA++Q +EA++EEKR++DE G SKR TR +++ + + Sbjct: 135 NPVERLSVHVHIARSQ-HEALIEEKRRKDENNEGPSKRITRGEKTRQQKNSIHEETMESI 193
Query: 131 EEAXXXXXXXXXXXPSYKLKSDIELAIDLKKVFEEHILNSKVE 3 P+YKL+SDIE A DLKKV EE IL++KVE Sbjct: 194 STKERKIGKEKAKAPAYKLQSDIEAATDLKKVLEERILSAKVE 236
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