BP915471 |
Clone id |
YMU001_000072_A04 |
Library |
YMU01 |
Length |
434 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000072_A04. |
Accession |
BP915471 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1398Contig1 |
Sequence |
CAAATAACCTACTTAACCCGTATTGATGCGCCCTTCAGATTGGGTGCATTTTGACCACTT GAAAGTATTCTTCTCTCGTGTGTGTGCTTTGCCATCTGTAAAATTGTGTCAAAACTATTC TTTTCTCTACATCTCATTCATGTCCTTTTGCGGTCTTCAAAATTATGTACAAAATGTAAA TGTATTCAAACTCTGTGAGCATCTGCATTTAATATTTCTATCCTCCAGCCATTTCTTGAT TGGCTCCCATCAAGATGTAAAGCCATGACATGGAACTTTTTTAAAGCTGGCCGGTGCGCA ATTGAAAGCATTGTAATACCACTTTTGTGCAGCTCCTGGTACAGCTTTTCCTCTCCGTCT GCACTCACAGCTGATGTGCACTCATCTAGGATAGCAAACTTAGGATTATGGTAGAGCAAA CGAGACACAGCTAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9UBJ2 |
Definition |
sp|Q9UBJ2|ABCD2_HUMAN ATP-binding cassette sub-family D member 2 OS=Homo sapiens |
Align length |
76 |
Score (bit) |
81.3 |
E-value |
2.0e-15 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S7J2 |
Definition |
tr|A9S7J2|A9S7J2_PHYPA ATP-binding cassette transporter, subfamily D, member 1, group PMP protein PpABCD1 OS=Physcomitrella patens subsp. patens |
Align length |
53 |
Score (bit) |
90.5 |
E-value |
4.0e-17 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915471|Adiantum capillus-veneris mRNA, clone: YMU001_000072_A04. (434 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S7J2|A9S7J2_PHYPA ATP-binding cassette transporter, subfami... 91 4e-17 tr|A8JEC6|A8JEC6_CHLRE Predicted protein (Fragment) OS=Chlamydom... 89 8e-17 tr|B3RUL2|B3RUL2_TRIAD Putative uncharacterized protein OS=Trich... 89 1e-16 tr|A7T4T4|A7T4T4_NEMVE Predicted protein (Fragment) OS=Nematoste... 84 5e-15 tr|A7SGR3|A7SGR3_NEMVE Predicted protein OS=Nematostella vectens... 84 5e-15 tr|A5DSW2|A5DSW2_LODEL Putative uncharacterized protein OS=Lodde... 83 8e-15 tr|Q4SDV6|Q4SDV6_TETNG Chromosome undetermined SCAF14629, whole ... 82 1e-14 tr|Q16U17|Q16U17_AEDAE Putative uncharacterized protein OS=Aedes... 82 2e-14 tr|B4NHJ8|B4NHJ8_DROWI GK13610 OS=Drosophila willistoni GN=GK136... 82 2e-14 tr|B0X1Z0|B0X1Z0_CULQU ATP-binding cassette sub-family D member ... 82 2e-14 tr|A2ALM9|A2ALM9_MOUSE ATP-binding cassette, sub-family D, membe... 81 2e-14 tr|B7NZN6|B7NZN6_RABIT ATP-binding cassette sub-family D member ... 81 2e-14 tr|B4JZT5|B4JZT5_DROGR GH24000 OS=Drosophila grimshawi GN=GH2400... 81 2e-14 tr|B2RAM3|B2RAM3_HUMAN cDNA, FLJ95001, Homo sapiens ATP-binding ... 81 2e-14 tr|Q2KJ57|Q2KJ57_BOVIN ATP-binding cassette, sub-family D (ALD),... 81 3e-14 tr|O45730|O45730_CAEEL Protein T02D1.5, partially confirmed by t... 81 3e-14 tr|Q3UYE0|Q3UYE0_MOUSE Putative uncharacterized protein OS=Mus m... 80 4e-14 tr|B4R2D7|B4R2D7_DROSI GD24389 OS=Drosophila simulans GN=GD24389... 80 5e-14 tr|B4IL86|B4IL86_DROSE GM23229 OS=Drosophila sechellia GN=GM2322... 80 5e-14 tr|B3P9V3|B3P9V3_DROER GG16459 OS=Drosophila erecta GN=GG16459 P... 80 5e-14 tr|B0S598|B0S598_DANRE Novel protein similar to vertebrate ATP-b... 80 7e-14 tr|A8WMZ0|A8WMZ0_CAEBR CBR-PMP-4 protein OS=Caenorhabditis brigg... 80 7e-14 tr|B4MF35|B4MF35_DROVI GJ15386 OS=Drosophila virilis GN=GJ15386 ... 79 9e-14 tr|Q3TU16|Q3TU16_MOUSE Putative uncharacterized protein (Fragmen... 79 1e-13 tr|Q7PYR2|Q7PYR2_ANOGA AGAP002071-PA OS=Anopheles gambiae GN=AGA... 79 1e-13 tr|Q4P7G8|Q4P7G8_USTMA Putative uncharacterized protein OS=Ustil... 79 1e-13 tr|Q8IMC0|Q8IMC0_DROME CG2316, isoform F OS=Drosophila melanogas... 78 2e-13 tr|Q7JUN3|Q7JUN3_DROME CG2316, isoform A OS=Drosophila melanogas... 78 2e-13 tr|Q29CS7|Q29CS7_DROPS GA15347 OS=Drosophila pseudoobscura pseud... 78 2e-13 tr|B7PGT9|B7PGT9_IXOSC ABC transporter, putative OS=Ixodes scapu... 78 2e-13
>tr|A9S7J2|A9S7J2_PHYPA ATP-binding cassette transporter, subfamily D, member 1, group PMP protein PpABCD1 OS=Physcomitrella patens subsp. patens GN=ppabcd1 PE=3 SV=1 Length = 579
Score = 90.5 bits (223), Expect = 4e-17 Identities = 42/53 (79%), Positives = 49/53 (92%) Frame = -1
Query: 434 LAVSRLLYHNPKFAILDECTSAVSADGEEKLYQELHKSGITMLSIAHRPALKK 276 LAV+R+LYHNP++A+LDECTSAVSADGEE LY+ L SGIT+LSIAHRPALKK Sbjct: 527 LAVARVLYHNPRYAVLDECTSAVSADGEENLYKNLRGSGITLLSIAHRPALKK 579
>tr|A8JEC6|A8JEC6_CHLRE Predicted protein (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_179191 PE=3 SV=1 Length = 641
Score = 89.4 bits (220), Expect = 8e-17 Identities = 48/87 (55%), Positives = 59/87 (67%), Gaps = 12/87 (13%) Frame = -1
Query: 434 LAVSRLLYHNPKFAILDECTSAVSADGEEKLYQELHKSGITMLSIAH----------RPA 285 LA++RLLYH P++A+LDECTSAVSADGE +LY E +SG+T LSIAH RPA Sbjct: 357 LAMARLLYHRPQYAVLDECTSAVSADGELRLYGECLRSGVTFLSIAHSGVTFLSIALRPA 416
Query: 284 LKKFHVMALHLDG--SQSRNGWRIEIL 210 LK+FH +H D SQ+ GW E L Sbjct: 417 LKRFHSAVIHFDANVSQTGLGWWSEAL 443
>tr|B3RUL2|B3RUL2_TRIAD Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_55331 PE=4 SV=1 Length = 754
Score = 88.6 bits (218), Expect = 1e-16 Identities = 43/79 (54%), Positives = 53/79 (67%) Frame = -1
Query: 434 LAVSRLLYHNPKFAILDECTSAVSADGEEKLYQELHKSGITMLSIAHRPALKKFHVMALH 255 + +RL YH PKFA+LDECTSAVS D E K+YQ GI +LSI+HRP+L K+H L Sbjct: 631 VGTARLFYHKPKFALLDECTSAVSIDVEGKIYQVAKDKGIILLSISHRPSLWKYHTHVLQ 690
Query: 254 LDGSQSRNGWRIEILNADA 198 DG GWR+E LN +A Sbjct: 691 FDG---EGGWRLEELNTEA 706
>tr|A7T4T4|A7T4T4_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g5736 PE=3 SV=1 Length = 185
Score = 83.6 bits (205), Expect = 5e-15 Identities = 40/76 (52%), Positives = 52/76 (68%) Frame = -1
Query: 434 LAVSRLLYHNPKFAILDECTSAVSADGEEKLYQELHKSGITMLSIAHRPALKKFHVMALH 255 + ++RL YH P+FA+LDECTSAVS D E ++Q SGIT+LSI+HRP+L K+H L Sbjct: 77 MGMARLFYHKPQFALLDECTSAVSIDVEGSIFQAAKDSGITLLSISHRPSLWKYHTHILQ 136
Query: 254 LDGSQSRNGWRIEILN 207 DG GW+ E LN Sbjct: 137 FDG---EGGWKYEQLN 149
>tr|A7SGR3|A7SGR3_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g245176 PE=3 SV=1 Length = 727
Score = 83.6 bits (205), Expect = 5e-15 Identities = 40/76 (52%), Positives = 52/76 (68%) Frame = -1
Query: 434 LAVSRLLYHNPKFAILDECTSAVSADGEEKLYQELHKSGITMLSIAHRPALKKFHVMALH 255 + ++RL YH P+FA+LDECTSAVS D E ++Q SGIT+LSI+HRP+L K+H L Sbjct: 611 MGMARLFYHKPQFALLDECTSAVSIDVEGSIFQAAKDSGITLLSISHRPSLWKYHTHILQ 670
Query: 254 LDGSQSRNGWRIEILN 207 DG GW+ E LN Sbjct: 671 FDG---EGGWKYEQLN 683
>tr|A5DSW2|A5DSW2_LODEL Putative uncharacterized protein OS=Lodderomyces elongisporus GN=LELG_00448 PE=3 SV=1 Length = 688
Score = 82.8 bits (203), Expect = 8e-15 Identities = 42/78 (53%), Positives = 54/78 (69%) Frame = -1
Query: 434 LAVSRLLYHNPKFAILDECTSAVSADGEEKLYQELHKSGITMLSIAHRPALKKFHVMALH 255 LA++RL YH PKFA+LDECTSAVS D E+ +Y+ + GIT+LS+AHRPAL FH L Sbjct: 572 LAMARLYYHEPKFAVLDECTSAVSPDMEQFMYEHAQELGITLLSVAHRPALWHFHKYLLK 631
Query: 254 LDGSQSRNGWRIEILNAD 201 DG + G+ L+AD Sbjct: 632 FDG---KGGYYFGPLDAD 646
>tr|Q4SDV6|Q4SDV6_TETNG Chromosome undetermined SCAF14629, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00019846001 PE=3 SV=1 Length = 718
Score = 82.4 bits (202), Expect = 1e-14 Identities = 38/77 (49%), Positives = 53/77 (68%) Frame = -1
Query: 434 LAVSRLLYHNPKFAILDECTSAVSADGEEKLYQELHKSGITMLSIAHRPALKKFHVMALH 255 + ++R+ YH PK+A+LDECTSAVS D E K++Q +GI++LSI HRP+L K+H L Sbjct: 603 MGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAKNAGISLLSITHRPSLWKYHTHLLQ 662
Query: 254 LDGSQSRNGWRIEILNA 204 DG GWR E L++ Sbjct: 663 FDG---EGGWRFEQLDS 676
>tr|Q16U17|Q16U17_AEDAE Putative uncharacterized protein OS=Aedes aegypti GN=AAEL010047 PE=3 SV=1 Length = 753
Score = 81.6 bits (200), Expect = 2e-14 Identities = 40/81 (49%), Positives = 51/81 (62%) Frame = -1
Query: 434 LAVSRLLYHNPKFAILDECTSAVSADGEEKLYQELHKSGITMLSIAHRPALKKFHVMALH 255 +A++RL YH P +A+LDECTSAVS D E +Y+ GIT+L+I HRP L KFH L Sbjct: 647 MAMARLFYHKPHYALLDECTSAVSIDVESSIYETAISMGITLLTITHRPTLWKFHTHILE 706
Query: 254 LDGSQSRNGWRIEILNADAHR 192 DG + GW E L DA + Sbjct: 707 FDG---QGGWVFEALAKDAQQ 724
>tr|B4NHJ8|B4NHJ8_DROWI GK13610 OS=Drosophila willistoni GN=GK13610 PE=4 SV=1 Length = 730
Score = 81.6 bits (200), Expect = 2e-14 Identities = 39/78 (50%), Positives = 51/78 (65%) Frame = -1
Query: 434 LAVSRLLYHNPKFAILDECTSAVSADGEEKLYQELHKSGITMLSIAHRPALKKFHVMALH 255 +AV+RL YH PK+A+LDECTSAVS D E +Y+ GIT+L+I HRP L K+H L Sbjct: 647 MAVARLFYHKPKYALLDECTSAVSIDVESSIYESAKSMGITLLTITHRPTLWKYHTHILE 706
Query: 254 LDGSQSRNGWRIEILNAD 201 DG S WR ++A+ Sbjct: 707 FDGMGS---WRFRKMDAN 721
>tr|B0X1Z0|B0X1Z0_CULQU ATP-binding cassette sub-family D member 1 OS=Culex quinquefasciatus GN=CpipJ_CPIJ013253 PE=3 SV=1 Length = 753
Score = 81.6 bits (200), Expect = 2e-14 Identities = 40/79 (50%), Positives = 50/79 (63%) Frame = -1
Query: 434 LAVSRLLYHNPKFAILDECTSAVSADGEEKLYQELHKSGITMLSIAHRPALKKFHVMALH 255 +A++RL YH P +A+LDECTSAVS D E +Y+ GIT+L+I HRP L KFH L Sbjct: 646 MAMARLFYHKPHYALLDECTSAVSVDVESSIYETAKSMGITLLTITHRPTLWKFHTHILE 705
Query: 254 LDGSQSRNGWRIEILNADA 198 DG + GW E L DA Sbjct: 706 FDG---QGGWVFEPLAKDA 721
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