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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915477
Clone id YMU001_000072_A10
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000072_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AAAACACCATTCGAAATATTTGGTGTGGGTGACCATATTTTAGGCATCCAAGGCCATCCT
GAGTTTAGCATGGATGTTGTGATGGATATAATCGAGTCCCGTGCAGCCATGGGTATTCTA
TCAGTATGTAATCTCAACCTGGTCTTTAGTATTTTTTGTTGGTCACAAAGTTATGGTTTG
CTTATTCTTTTATGAATTGCAAGTTGGTTTTTGAAAAAAAAAAGAGAGATTTAGTTTAGT
TGAAGGAAGAGAAGAAGAAAGATGAGTTTTAACGTCATAGGAACAATCCCTGGGTAGTCT
TGAACTCTGAGACTTGTTCTTCAAGAGAGTGTTGTGTCTGCTTTGGTTAGCCTTGTTTTG
TAACGTGTAATAGCTGTGAGTGAGAATGTCAGACTGATTGGTTTTCAAATATTATAGCTG
CCATGCAACGACATAACAGGACTTTGTGAATAGCAGTCATAGGGGACGCCCATTTTTGGG
CTTCCCATTCCCACTTTTCTGTCCCC
■■Homology search results ■■ -
sp_hit_id Q8IV33
Definition sp|Q8IV33|CE036_HUMAN Uncharacterized protein C5orf36 OS=Homo sapiens
Align length 72
Score (bit) 32.3
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915477|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_A10.
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8IV33|CE036_HUMAN Uncharacterized protein C5orf36 OS=Homo sa...    32   1.3  
sp|Q9DBP0|NPT2B_MOUSE Sodium-dependent phosphate transport prote...    32   2.2  
sp|Q6UUW5|CRLB_DICDI Cyclic AMP receptor-like protein B OS=Dicty...    31   3.8  
sp|Q12NQ9|DSBB_SHEDO Disulfide bond formation protein B OS=Shewa...    30   4.9  
sp|Q5XD68|Y510_STRP6 Uncharacterized protein M6_Spy0510 OS=Strep...    30   6.5  
sp|Q9JJ09|NPT2B_RAT Sodium-dependent phosphate transport protein...    30   8.4  

>sp|Q8IV33|CE036_HUMAN Uncharacterized protein C5orf36 OS=Homo
           sapiens GN=C5orf36 PE=2 SV=1
          Length = 324

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
 Frame = -3

Query: 402 TNQSDILTHS-----YYTLQNKANQSRHNTLLKNKSQSSRLPRDCSYDVKTHLSSSLPST 238
           T++S  ++H      + TLQ+         LLKN+     +  D  +D+  H S S PST
Sbjct: 82  TSESSFISHGDLIKFFKTLQD---------LLKNEQNQEEMTLDLLWDLSCHSSVSFPST 132

Query: 237 KLNLSFFFQKPT 202
               SF F   T
Sbjct: 133 LSGTSFHFLSRT 144


>sp|Q9DBP0|NPT2B_MOUSE Sodium-dependent phosphate transport protein
           2B OS=Mus musculus GN=Slc34a2 PE=2 SV=1
          Length = 697

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = +3

Query: 276 HRNNPW--VVLNSETCSSRECCVCFG*PCFVTCNSCE*EC 389
           H   PW  V+  + TC  R CC C    C V C  C  +C
Sbjct: 598 HSLKPWDNVISLATTCFQRRCCCCCRVCCRVCCMVCGCKC 637


>sp|Q6UUW5|CRLB_DICDI Cyclic AMP receptor-like protein B
           OS=Dictyostelium discoideum GN=crlB PE=2 SV=1
          Length = 442

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 16/107 (14%)
 Frame = -3

Query: 399 NQSDILTHSYYTLQNKANQSRHNTLLKNKSQSSRLPRD------CSYDVK----THLSSS 250
           N S + ++S   +  + N +++N L K K+   +   +      C+Y       +  SSS
Sbjct: 76  NNSGVGSYSSTPISIQNNNNKNNNLPKQKNNEKQPLINKNHNNYCNYSTSATSSSSSSSS 135

Query: 249 LPSTKLNLSFFFQKPTCNS*KNKQTIT------L*PTKNTKDQVEIT 127
             ST    S+ +Q+P     KN+QT++        P+ NTK ++E++
Sbjct: 136 FSSTNSGSSYEYQQPQ----KNQQTLSSSDKNNTIPSTNTKYEIELS 178


>sp|Q12NQ9|DSBB_SHEDO Disulfide bond formation protein B
           OS=Shewanella denitrificans (strain OS217 / ATCC
           BAA-1090 / DSM 15013) GN=dsbB PE=3 SV=1
          Length = 175

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 107 PWVFYQYVISTWSLVFFVGHKVMVCLFFY 193
           PW      ++ W+L+ FVG+ +   LF Y
Sbjct: 134 PWTMMSLSMTQWTLIAFVGYSIAFLLFIY 162


>sp|Q5XD68|Y510_STRP6 Uncharacterized protein M6_Spy0510
           OS=Streptococcus pyogenes serotype M6 GN=M6_Spy0510 PE=1
           SV=1
          Length = 149

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 23/80 (28%), Positives = 32/80 (40%)
 Frame = -3

Query: 369 YTLQNKANQSRHNTLLKNKSQSSRLPRDCSYDVKTHLSSSLPSTKLNLSFFFQKPTCNS* 190
           Y    ++    H    +  S+ S L RD  YDVK  L+S   + +  L     K T    
Sbjct: 45  YQAYKESPDDYHQFAKEKGSEYSHLARDTFYDVKDKLASGDLTKEDMLDLLKDKTTAFVQ 104

Query: 189 KNKQTITL*PTKNTKDQVEI 130
           K K+T      K  +D V I
Sbjct: 105 KTKETFAEVEAKEKQDDVII 124


>sp|Q9JJ09|NPT2B_RAT Sodium-dependent phosphate transport protein 2B
           OS=Rattus norvegicus GN=Slc34a2 PE=2 SV=1
          Length = 695

 Score = 29.6 bits (65), Expect = 8.4
 Identities = 13/40 (32%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
 Frame = +3

Query: 276 HRNNPW--VVLNSETCSSRECCVCFG*PCFVTCNSCE*EC 389
           H   PW  ++  + +C  R CC C    C V C  C  +C
Sbjct: 598 HSLKPWDNIISLATSCFQRRCCCCCRVCCRVCCMVCGCKC 637
tr_hit_id Q6ETL5
Definition tr|Q6ETL5|Q6ETL5_ORYSJ Os02g0179200 protein OS=Oryza sativa subsp. japonica
Align length 32
Score (bit) 49.7
E-value 8.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915477|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_A10.
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6ETL5|Q6ETL5_ORYSJ Os02g0179200 protein OS=Oryza sativa subs...    50   8e-05
tr|A2X1L3|A2X1L3_ORYSI Putative uncharacterized protein OS=Oryza...    50   8e-05
tr|A9T8L2|A9T8L2_PHYPA Predicted protein OS=Physcomitrella paten...    48   3e-04
tr|A7PFJ7|A7PFJ7_VITVI Chromosome chr11 scaffold_14, whole genom...    46   9e-04
tr|A5BCK9|A5BCK9_VITVI Putative uncharacterized protein OS=Vitis...    46   0.001
tr|Q69QJ1|Q69QJ1_ORYSJ Os09g0424200 protein OS=Oryza sativa subs...    45   0.002
tr|A3BYZ5|A3BYZ5_ORYSJ Putative uncharacterized protein OS=Oryza...    45   0.002
tr|A2Z1D7|A2Z1D7_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002
tr|A7QM13|A7QM13_VITVI Chromosome undetermined scaffold_123, who...    44   0.003
tr|B7FHL2|B7FHL2_MEDTR Putative uncharacterized protein (Fragmen...    44   0.004
tr|A2Q1P2|A2Q1P2_MEDTR Glutamine amidotransferase class-I OS=Med...    44   0.004
tr|B6TVX9|B6TVX9_MAIZE Defense-related protein OS=Zea mays PE=2 ...    41   0.037
tr|Q9AUL0|Q9AUL0_ORYSA Putative glutamine synthetase OS=Oryza sa...    40   0.064
tr|Q10F14|Q10F14_ORYSJ Os03g0685300 protein OS=Oryza sativa subs...    40   0.064
tr|A3ALI1|A3ALI1_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.064
tr|A2XKS3|A2XKS3_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.064
tr|B1KRI1|B1KRI1_SHEWM Glutamine amidotransferase class-I OS=She...    40   0.083
tr|B6TR53|B6TR53_MAIZE Defense-related protein OS=Zea mays PE=2 ...    40   0.083
tr|Q9M0A6|Q9M0A6_ARATH Putative uncharacterized protein AT4g3054...    39   0.11 
tr|Q4PAZ3|Q4PAZ3_USTMA Putative uncharacterized protein OS=Ustil...    39   0.14 
tr|B8CHX7|B8CHX7_9GAMM Amidotransferase, putative OS=Shewanella ...    38   0.24 
tr|Q9M0A5|Q9M0A5_ARATH Putative uncharacterized protein AT4g3055...    38   0.24 
tr|Q8VZH8|Q8VZH8_ARATH AT4g30550/F17I23_110 OS=Arabidopsis thali...    38   0.24 
tr|Q8LBZ3|Q8LBZ3_ARATH Putative uncharacterized protein OS=Arabi...    38   0.24 
tr|O82224|O82224_ARATH Putative uncharacterized protein At2g2396...    38   0.24 
tr|Q5K801|Q5K801_CRYNE Cytoplasm protein, putative OS=Cryptococc...    38   0.24 
tr|Q4WV75|Q4WV75_ASPFU Putative uncharacterized protein OS=Asper...    38   0.24 
tr|B0Y0V4|B0Y0V4_ASPFC Putative uncharacterized protein OS=Asper...    38   0.24 
tr|A6R4D8|A6R4D8_AJECN Putative uncharacterized protein OS=Ajell...    38   0.24 
tr|B0TJ09|B0TJ09_SHEHH GMP synthase-glutamine amidotransferase d...    38   0.32 

>tr|Q6ETL5|Q6ETL5_ORYSJ Os02g0179200 protein OS=Oryza sativa subsp.
           japonica GN=P0544B02.16 PE=2 SV=1
          Length = 299

 Score = 49.7 bits (117), Expect = 8e-05
 Identities = 18/32 (56%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   KTPFEIFGVGDHILGIQGHPEFSMDVVMDIIE 96
           KTP E+F VGD++LGIQGHPE++ D+++++I+
Sbjct: 190 KTPVEMFAVGDNVLGIQGHPEYTSDILLNLID 221


>tr|A2X1L3|A2X1L3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06091 PE=4 SV=1
          Length = 300

 Score = 49.7 bits (117), Expect = 8e-05
 Identities = 18/32 (56%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   KTPFEIFGVGDHILGIQGHPEFSMDVVMDIIE 96
           KTP E+F VGD++LGIQGHPE++ D+++++I+
Sbjct: 191 KTPVEMFAVGDNVLGIQGHPEYTSDILLNLID 222


>tr|A9T8L2|A9T8L2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_89514 PE=4 SV=1
          Length = 217

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 20/36 (55%), Positives = 27/36 (75%)
 Frame = +1

Query: 1   KTPFEIFGVGDHILGIQGHPEFSMDVVMDIIESRAA 108
           +T  E+F +G+H L IQGHPEF  DVV+D++E R A
Sbjct: 144 RTGIEMFAMGEHALAIQGHPEFFEDVVVDLLEGRLA 179


>tr|A7PFJ7|A7PFJ7_VITVI Chromosome chr11 scaffold_14, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00017126001
           PE=4 SV=1
          Length = 248

 Score = 46.2 bits (108), Expect = 9e-04
 Identities = 17/32 (53%), Positives = 27/32 (84%)
 Frame = +1

Query: 1   KTPFEIFGVGDHILGIQGHPEFSMDVVMDIIE 96
           KT  E+F +GDHI+GIQGHPE++ D++ ++I+
Sbjct: 176 KTGVEMFTIGDHIMGIQGHPEYTKDILCNLID 207


>tr|A5BCK9|A5BCK9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_013737 PE=4 SV=1
          Length = 499

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 16/32 (50%), Positives = 27/32 (84%)
 Frame = +1

Query: 1   KTPFEIFGVGDHILGIQGHPEFSMDVVMDIIE 96
           KT  E+F +GDHI+G+QGHPE++ D++ ++I+
Sbjct: 176 KTGVEMFTIGDHIMGVQGHPEYTKDILCNLID 207


>tr|Q69QJ1|Q69QJ1_ORYSJ Os09g0424200 protein OS=Oryza sativa subsp.
           japonica GN=P0418B08.26 PE=4 SV=1
          Length = 272

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 16/42 (38%), Positives = 32/42 (76%)
 Frame = +1

Query: 1   KTPFEIFGVGDHILGIQGHPEFSMDVVMDIIESRAAMGILSV 126
           KT  E+F  GD +LGIQGHPE++ D+++++++  ++ G +++
Sbjct: 198 KTGVEMFCAGDRVLGIQGHPEYTADILLNLVDRLSSAGSITM 239


>tr|A3BYZ5|A3BYZ5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_028267 PE=4 SV=1
          Length = 293

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 16/42 (38%), Positives = 32/42 (76%)
 Frame = +1

Query: 1   KTPFEIFGVGDHILGIQGHPEFSMDVVMDIIESRAAMGILSV 126
           KT  E+F  GD +LGIQGHPE++ D+++++++  ++ G +++
Sbjct: 219 KTGVEMFCAGDRVLGIQGHPEYTADILLNLVDRLSSAGSITM 260


>tr|A2Z1D7|A2Z1D7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31418 PE=4 SV=1
          Length = 273

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 16/42 (38%), Positives = 32/42 (76%)
 Frame = +1

Query: 1   KTPFEIFGVGDHILGIQGHPEFSMDVVMDIIESRAAMGILSV 126
           KT  E+F  GD +LGIQGHPE++ D+++++++  ++ G +++
Sbjct: 199 KTGVEMFCAGDRVLGIQGHPEYTADILLNLVDRLSSAGSITM 240


>tr|A7QM13|A7QM13_VITVI Chromosome undetermined scaffold_123, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00001870001 PE=4 SV=1
          Length = 246

 Score = 44.3 bits (103), Expect = 0.003
 Identities = 16/32 (50%), Positives = 26/32 (81%)
 Frame = +1

Query: 1   KTPFEIFGVGDHILGIQGHPEFSMDVVMDIIE 96
           KT  E+F  GDH++GIQGHPE++ D+++ +I+
Sbjct: 172 KTGIEMFKYGDHMMGIQGHPEYTTDILLHLID 203


>tr|B7FHL2|B7FHL2_MEDTR Putative uncharacterized protein (Fragment)
           OS=Medicago truncatula PE=2 SV=1
          Length = 220

 Score = 43.9 bits (102), Expect = 0.004
 Identities = 21/52 (40%), Positives = 31/52 (59%)
 Frame = +1

Query: 1   KTPFEIFGVGDHILGIQGHPEFSMDVVMDIIESRAAMGILSVCNLNLVFSIF 156
           KT  E+F  G+H+LGIQGHPEF++D+ +  I+         + N NL+   F
Sbjct: 172 KTGIEMFRYGNHMLGIQGHPEFNIDIFLHFID--------RITNRNLIQEAF 215