BP915478 |
Clone id |
YMU001_000072_A12 |
Library |
YMU01 |
Length |
516 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000072_A12. |
Accession |
BP915478 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AACTGGAAGAATTCGCGGCCGCAGGAATGTTTCTATAAGTGCATCATGTTCTAATTGCAT GGCAGCCCTCCAATTCTCAAAATTTTGTGCTTCATCAAAAGATAGAGGTTTCTCAACATC ACATAAACTAGAAACAGCCAAAGCATAGCAGCGTAATGCATAAGATGCATGGCGAGAACC TGAACAAGTACGACTAGACAAAGGTGCATCCAATTTACTATCACACAAGTATGCACCAAC CATTTTGGCATACTTTTAGCCAGCTCATTCTCAACCCTTTCCTCATCAAGTATATCATGT ACATCTGCATCAAAAATTGGCTGATCTGTAATATTTTCAGAAACCCCCCCCATAGGCTTT ACGTTTGCCTCGTTGGAATTTACATTTGAACTTCCACCATTGAAAAGAGGCAATAAACTG TCATAAATTTCCTCTCAACTTACATTATTGTCTCTAGTACATGACAGCAAGGGCTGAAGA GAATCTTCCACAAACACAACATCCCGTGAAACCAAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q128K2 |
Definition |
sp|Q128K2|DNAK_POLSJ Chaperone protein dnaK OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) |
Align length |
49 |
Score (bit) |
32.3 |
E-value |
1.2 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6SGZ9 |
Definition |
tr|Q6SGZ9|Q6SGZ9_9BACT Penicillin G acylase, putative OS=uncultured marine bacterium 443 |
Align length |
42 |
Score (bit) |
37.0 |
E-value |
0.5 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915478|Adiantum capillus-veneris mRNA, clone: YMU001_000072_A12. (488 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6SGZ9|Q6SGZ9_9BACT Penicillin G acylase, putative OS=uncultu... 37 0.50 tr|Q01MW9|Q01MW9_ORYSA OSIGBa0132G14.4 protein OS=Oryza sativa G... 37 0.65 tr|A0LPC6|A0LPC6_SYNFM Membrane protein, putative OS=Syntrophoba... 36 1.1 tr|Q9AY40|Q9AY40_ORYSA Putative gag-pol polyprotein OS=Oryza sat... 35 1.9 tr|Q8H8D2|Q8H8D2_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 35 1.9 tr|Q7XQG8|Q7XQG8_ORYSJ OJ000114_01.9 protein OS=Oryza sativa sub... 35 1.9 tr|Q7XM06|Q7XM06_ORYSJ OSJNBa0086O06.3 protein OS=Oryza sativa s... 35 1.9 tr|Q7X8G8|Q7X8G8_ORYSA OSJNBb0016D16.22 protein OS=Oryza sativa ... 35 1.9 tr|Q7X6B4|Q7X6B4_ORYSA OSJNBa0079F16.1 protein (OSJNBa0009K15.25... 35 1.9 tr|Q53LP5|Q53LP5_ORYSJ Os11g0199800 protein OS=Oryza sativa subs... 35 1.9 tr|Q2QW16|Q2QW16_ORYSJ Retrotransposon protein, putative, unclas... 35 1.9 tr|Q0JNP3|Q0JNP3_ORYSJ Os01g0275200 protein OS=Oryza sativa subs... 35 1.9 tr|Q0J6Y6|Q0J6Y6_ORYSJ Os08g0248500 protein OS=Oryza sativa subs... 35 1.9 tr|Q0DEJ1|Q0DEJ1_ORYSJ Os06g0149600 protein OS=Oryza sativa subs... 35 1.9 tr|B8AE64|B8AE64_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.9 tr|Q8S7C7|Q8S7C7_ORYSA Putative gag-pol polyprotein OS=Oryza sat... 35 2.5 tr|Q7XWZ9|Q7XWZ9_ORYSA OSJNBa0079F16.4 protein OS=Oryza sativa G... 35 2.5 tr|Q7XC17|Q7XC17_ORYSJ Retrotransposon protein, putative, Ty1-co... 35 2.5 tr|Q2QWI2|Q2QWI2_ORYSJ Retrotransposon protein, putative, unclas... 35 2.5 tr|Q2QMT8|Q2QMT8_ORYSJ Retrotransposon protein, putative, Ty1-co... 35 2.5 tr|A3TJB9|A3TJB9_9MICO Putative uncharacterized protein OS=Janib... 34 4.2 tr|B4P5N6|B4P5N6_DROYA GE13471 OS=Drosophila yakuba GN=GE13471 P... 34 4.2 tr|B7SVE1|B7SVE1_9VIRU GrBNV_gp37-like protein OS=Oryctes rhinoc... 33 5.5 tr|Q1QPN9|Q1QPN9_NITHX ABC transporter related OS=Nitrobacter ha... 33 5.5 tr|Q8GZY7|Q8GZY7_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 33 5.5 tr|Q7XM33|Q7XM33_ORYSJ OSJNBb0022P19.9 protein (OSJNBa0083I11.5 ... 33 5.5 tr|Q0DSV7|Q0DSV7_ORYSJ Os03g0285000 protein OS=Oryza sativa subs... 33 5.5 tr|B8CC12|B8CC12_THAPS Formyltetrahydrofolate deformylase (Fragm... 33 5.5 tr|Q9FWC8|Q9FWC8_ORYSJ Putative uncharacterized protein OSJNBb00... 33 7.2 tr|Q8T9M3|Q8T9M3_9TRYP RHS1 OS=Trypanosoma brucei GN=RHS1 PE=4 SV=1 33 7.2
>tr|Q6SGZ9|Q6SGZ9_9BACT Penicillin G acylase, putative OS=uncultured marine bacterium 443 GN=MBMO_EBAC000-65D02.14 PE=4 SV=1 Length = 746
Score = 37.0 bits (84), Expect = 0.50 Identities = 19/42 (45%), Positives = 28/42 (66%) Frame = -1
Query: 143 HASYALRCYALAVSSLCDVEKPLSFDEAQNFENWRAAMQLEH 18 H YA+R YA + + VE+ L+ ++A+NFE WRAA+ L H Sbjct: 378 HGVYAIR-YA-GIDEMKQVEQWLAMNKAKNFEQWRAAVALNH 417
>tr|Q01MW9|Q01MW9_ORYSA OSIGBa0132G14.4 protein OS=Oryza sativa GN=OSIGBa0132G14.4 PE=4 SV=1 Length = 1085
Score = 36.6 bits (83), Expect = 0.65 Identities = 14/29 (48%), Positives = 23/29 (79%) Frame = -1
Query: 89 VEKPLSFDEAQNFENWRAAMQLEHDALIE 3 +E+P++ EA+++ WRAAMQ E D++IE Sbjct: 674 LEEPVALKEAESYPQWRAAMQAEMDSIIE 702
>tr|A0LPC6|A0LPC6_SYNFM Membrane protein, putative OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=Sfum_3608 PE=4 SV=1 Length = 470
Score = 35.8 bits (81), Expect = 1.1 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +2
Query: 179 HPIYYHTSMHQPFWHTFSQLILNPFLIKYIMYICIKNWLICNIFRNPPHRL 331 +P Y TS+ P+W F+ + F + +IM + WL+ I+ P +L Sbjct: 209 YPWQYFTSIAPPYWEKFANTVSGNFHVAWIMCCTVTVWLVETIWERFPFKL 259
>tr|Q9AY40|Q9AY40_ORYSA Putative gag-pol polyprotein OS=Oryza sativa GN=OSJNBa0027P10.24 PE=4 SV=1 Length = 1611
Score = 35.0 bits (79), Expect = 1.9 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -1
Query: 95 CDVEKPLSFDEAQNFENWRAAMQLEHDALIE 3 CD +P SF EA+ WRAAMQ E DA+ E Sbjct: 1091 CDDGEPRSFAEAEKHAAWRAAMQSEMDAVQE 1121
>tr|Q8H8D2|Q8H8D2_ORYSJ Putative gag-pol polyprotein OS=Oryza sativa subsp. japonica GN=OJ1006F06.13 PE=4 SV=1 Length = 1586
Score = 35.0 bits (79), Expect = 1.9 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -1
Query: 95 CDVEKPLSFDEAQNFENWRAAMQLEHDALIE 3 CD +P SF EA+ WRAAMQ E DA+ E Sbjct: 1081 CDDGEPRSFAEAEKHAAWRAAMQSEMDAVQE 1111
>tr|Q7XQG8|Q7XQG8_ORYSJ OJ000114_01.9 protein OS=Oryza sativa subsp. japonica GN=OJ000114_01.9 PE=4 SV=1 Length = 1601
Score = 35.0 bits (79), Expect = 1.9 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -1
Query: 95 CDVEKPLSFDEAQNFENWRAAMQLEHDALIE 3 CD +P SF EA+ WRAAMQ E DA+ E Sbjct: 1081 CDDGEPRSFAEAEKHAAWRAAMQSEMDAVQE 1111
>tr|Q7XM06|Q7XM06_ORYSJ OSJNBa0086O06.3 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0086O06.3 PE=4 SV=2 Length = 1498
Score = 35.0 bits (79), Expect = 1.9 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -1
Query: 95 CDVEKPLSFDEAQNFENWRAAMQLEHDALIE 3 CD +P SF EA+ WRAAMQ E DA+ E Sbjct: 978 CDDGEPRSFAEAEKHAAWRAAMQSEMDAVQE 1008
>tr|Q7X8G8|Q7X8G8_ORYSA OSJNBb0016D16.22 protein OS=Oryza sativa GN=OSJNBb0016D16.22 PE=4 SV=1 Length = 1498
Score = 35.0 bits (79), Expect = 1.9 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -1
Query: 95 CDVEKPLSFDEAQNFENWRAAMQLEHDALIE 3 CD +P SF EA+ WRAAMQ E DA+ E Sbjct: 978 CDDGEPRSFAEAEKHAAWRAAMQSEMDAVQE 1008
>tr|Q7X6B4|Q7X6B4_ORYSA OSJNBa0079F16.1 protein (OSJNBa0009K15.25 protein) OS=Oryza sativa GN=OSJNBa0079F16.1 PE=4 SV=1 Length = 1592
Score = 35.0 bits (79), Expect = 1.9 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -1
Query: 95 CDVEKPLSFDEAQNFENWRAAMQLEHDALIE 3 CD +P SF EA+ WRAAMQ E DA+ E Sbjct: 1152 CDDGEPRSFAEAEKHAAWRAAMQSEMDAVQE 1182
>tr|Q53LP5|Q53LP5_ORYSJ Os11g0199800 protein OS=Oryza sativa subsp. japonica GN=Os11g0199800 PE=4 SV=1 Length = 1523
Score = 35.0 bits (79), Expect = 1.9 Identities = 17/31 (54%), Positives = 20/31 (64%) Frame = -1
Query: 95 CDVEKPLSFDEAQNFENWRAAMQLEHDALIE 3 CD +P SF EA+ WRAAMQ E DA+ E Sbjct: 1061 CDDGEPRSFAEAEKHAAWRAAMQSEMDAVQE 1091
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