BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915479|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_B02.
         (358 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P38045|NRTC_SYNE7 Nitrate transport ATP-binding protein nrtC ...    34   0.26 
sp|Q9BYR4|KRA43_HUMAN Keratin-associated protein 4-3 OS=Homo sap...    30   2.9  

>sp|P38045|NRTC_SYNE7 Nitrate transport ATP-binding protein nrtC
           OS=Synechococcus elongatus (strain PCC 7942) GN=nrtC
           PE=3 SV=1
          Length = 659

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = -1

Query: 256 QRYIETGHGSEPVRVTEFGRKTINVANRLTKTEIGIRSVYGMTGYKHWGTTP**TS**EC 77
           QRY + G G EP ++  F +  ++ AN     E      + +T    WG TP   +  E 
Sbjct: 538 QRYFDFGLGDEPTQILRFNQFHVDQANYPNPLE----GTWLLTQLCRWGLTPLPKNRQEL 593

Query: 76  LQRFLRRLHWLYNNQRLCLG-PLVTP 2
           L R  RR   +Y      +G PL+TP
Sbjct: 594 LDRVYRR--DIYEAAIAAVGFPLITP 617


>sp|Q9BYR4|KRA43_HUMAN Keratin-associated protein 4-3 OS=Homo
           sapiens GN=KRTAP4-3 PE=2 SV=2
          Length = 195

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 17/53 (32%), Positives = 19/53 (35%)
 Frame = +2

Query: 161 CLSQPICHIDCLSPEFCNPYRL*PMPCLYVSLGRVRRSSCPQPKLSQSSTRCP 319
           C     C   C  P+ C P    P  C+         SSC  P    SS RCP
Sbjct: 129 CCRPSCCISSCYRPQCCQPSCCRPACCI---------SSCCHPSCCVSSCRCP 172

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915479|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_B02.
         (358 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q5N5B5|Q5N5B5_SYNP6 ABC-type nitrate/nitrite transport system...    34   4.2  
tr|Q82P12|Q82P12_STRAW Putative LysR-family transcriptional regu...    33   5.5  

>tr|Q5N5B5|Q5N5B5_SYNP6 ABC-type nitrate/nitrite transport system
           ATP-binding protein OS=Synechococcus sp. (strain ATCC
           27144 / PCC 6301 / SAUG 1402/1) GN=nrtC PE=3 SV=1
          Length = 659

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = -1

Query: 256 QRYIETGHGSEPVRVTEFGRKTINVANRLTKTEIGIRSVYGMTGYKHWGTTP**TS**EC 77
           QRY + G G EP ++  F +  ++ AN     E      + +T    WG TP   +  E 
Sbjct: 538 QRYFDFGLGDEPTQILRFNQFHVDQANYPNPLE----GTWLLTQLCRWGLTPLPKNRQEL 593

Query: 76  LQRFLRRLHWLYNNQRLCLG-PLVTP 2
           L R  RR   +Y      +G PL+TP
Sbjct: 594 LDRVYRR--DIYEAAIAAVGFPLITP 617


>tr|Q82P12|Q82P12_STRAW Putative LysR-family transcriptional
           regulator OS=Streptomyces avermitilis GN=SAV1121 PE=4
           SV=1
          Length = 318

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = -1

Query: 229 SEPVRVTEFGRKTINVANRLTKTEIGIRSVYGMTG 125
           ++PVR TE G   +  A RL + E+  R+  GMTG
Sbjct: 55  TKPVRPTESGEAVVRFARRLARLELDARAELGMTG 89