BP915483 |
Clone id |
YMU001_000072_B08 |
Library |
YMU01 |
Length |
540 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000072_B08. |
Accession |
BP915483 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACAATCCATGAAAATGGTTTTTGGAGAGAAACTCTTGAGGTCCGCTCCCACAGCATCCAC ACTTGAACTTTAGCCGAGCTTCATGTCCCTACTTCTGTTGATGAGCATATCATGCAGCCA ATACAAAGTTCAAACAATGTTTCACCCTCTTCACCTACTCTACTTTAGTAGCTACAATAA AAATCTCCTCCCCTACAAGACACTTTAATCGCTTAAGCGATCTTTATTTTGTACCCAACA AATAAGTCACGAATATAGAATGCACCTTTGACCAACATCATAAGCATCGATAGTGGTTGG TTGGCAACAAATAAGTCACGAATATAGAATGCACCTTTGACCAACATCATAAGCATCGAT AGTGGTTGGTTGGCAACAAATAAGTCACGAATATAGAATGCACCTTTGACCAACATCATA AGCATCGATAGTGGTTGGTTGGCAACAATTGCTCATCAACACCGACCGTGGTGCCCCTTG TCCACCCTTGATCATTTACATCACATAATCTCATGACAATTGCGCTTTCATCACTTAACA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A2A5X5 |
Definition |
sp|A2A5X5|KR10D_MOUSE Putative keratin-associated protein 10-like ENSP00000375147 homolog OS=Mus musculus |
Align length |
68 |
Score (bit) |
34.3 |
E-value |
0.4 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A2DQ73 |
Definition |
tr|A2DQ73|A2DQ73_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 |
Align length |
81 |
Score (bit) |
37.7 |
E-value |
0.39 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915483|Adiantum capillus-veneris mRNA, clone: YMU001_000072_B08. (540 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A2DQ73|A2DQ73_TRIVA Putative uncharacterized protein OS=Trich... 38 0.39 tr|B6M1Z1|B6M1Z1_BRAFL Putative uncharacterized protein OS=Branc... 36 1.5 tr|A6QQG8|A6QQG8_BOVIN KRTAP9-2 protein OS=Bos taurus GN=KRTAP9-... 36 1.5 tr|Q52K51|Q52K51_STAAC Putative uncharacterized protein OS=Staph... 35 2.5 tr|Q5MCZ2|Q5MCZ2_SHEEP High-sulphur keratin intermediate-filamen... 34 4.4 tr|Q29619|Q29619_SHEEP High-sulphur wool matrix protein B2A OS=O... 34 4.4 tr|B4X1V5|B4X1V5_9GAMM Putative uncharacterized protein OS=Alcan... 34 5.6 tr|A8P0H8|A8P0H8_COPC7 Putative uncharacterized protein OS=Copri... 34 5.6 tr|A7T388|A7T388_NEMVE Predicted protein OS=Nematostella vectens... 33 9.7
>tr|A2DQ73|A2DQ73_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_494420 PE=4 SV=1 Length = 355
Score = 37.7 bits (86), Expect = 0.39 Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 20/81 (24%) Frame = -2
Query: 434 PLSMLMMLVKGAFYI--RDLFVANQ--------PLSMLMMLVKGAFYI--RDLFVANQ-- 297 P+SML ++ G FYI + + V Q P+SML ++ G FYI + + V Q Sbjct: 125 PMSMLKTMMDGQFYILQQKVIVKKQPNSLFHMVPMSMLKTMMDGQFYILQQKVIVKKQPN 184
Query: 296 ------PLSMLMMLVKGAFYI 252 P+SML ++ G FYI Sbjct: 185 SLFHMVPMSMLKTMMDGQFYI 205
Score = 37.0 bits (84), Expect = 0.66 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 20/81 (24%) Frame = -2
Query: 434 PLSMLMMLVKGAFYI--RDLFVANQ--------PLSMLMMLVKGAFYI--RDLFVANQ-- 297 P+SML ++ G FYI + + V Q P+SML + G FYI + + V Q Sbjct: 224 PMSMLKTMMDGQFYILQQKVIVKKQPNSLFHMVPMSMLKTKIDGQFYILQQKVIVKKQPN 283
Query: 296 ------PLSMLMMLVKGAFYI 252 P+SML ++ G FYI Sbjct: 284 SLFHMVPMSMLKTMMDGQFYI 304
Score = 36.2 bits (82), Expect = 1.1 Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 20/81 (24%) Frame = -2
Query: 434 PLSMLMMLVKGAFYI--RDLFVANQ--------PLSMLMMLVKGAFYI--RDLFVANQ-- 297 P+SML ++ G FYI + + V Q P+SML ++ G FYI + + V Q Sbjct: 26 PMSMLKTMMDGQFYILQQKVIVKKQPNSLFHMVPMSMLKTMMDGQFYILQQKVIVKKQPN 85
Query: 296 ------PLSMLMMLVKGAFYI 252 P+SML + G FYI Sbjct: 86 SLFHMVPMSMLKTKMDGQFYI 106
>tr|B6M1Z1|B6M1Z1_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_121622 PE=4 SV=1 Length = 824
Score = 35.8 bits (81), Expect = 1.5 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 12/70 (17%) Frame = -3
Query: 403 VHSIFVTYLLPTNHYRCL*CWSK------VHSIFVTYLLPTNHYRCL*CWSK------VH 260 VHS+ Y+L T YR + C + VHS+ Y+L T R + C + VH Sbjct: 374 VHSVLSDYVLSTAFYRTMCCPQRSVGLCVVHSVLSNYVLSTAFCRTMCCPQRSIGLGVVH 433
Query: 259 SIFVTYLLGT 230 S+ Y+L T Sbjct: 434 SVLSDYVLST 443
>tr|A6QQG8|A6QQG8_BOVIN KRTAP9-2 protein OS=Bos taurus GN=KRTAP9-2 PE=2 SV=1 Length = 296
Score = 35.8 bits (81), Expect = 1.5 Identities = 19/73 (26%), Positives = 30/73 (41%), Gaps = 4/73 (5%) Frame = -1
Query: 468 RSVLMSNCCQPTTIDAY----DVGQRCILYS*LICCQPTTIDAYDVGQRCILYS*LICCQ 301 + + ++ CCQPT ++ Q C + CC+PT + + CCQ Sbjct: 160 KPICVTTCCQPTCCESSCCQPSCPQTCCQITETTCCKPTCVTS--------------CCQ 205
Query: 300 PTTIDAYDVGQRC 262 PT + GQ C Sbjct: 206 PTCCGSISGGQTC 218
>tr|Q52K51|Q52K51_STAAC Putative uncharacterized protein OS=Staphylococcus aureus (strain COL) GN=SACOL0732 PE=4 SV=1 Length = 74
Score = 35.0 bits (79), Expect = 2.5 Identities = 19/67 (28%), Positives = 36/67 (53%) Frame = -2
Query: 431 LSMLMMLVKGAFYIRDLFVANQPLSMLMMLVKGAFYIRDLFVANQPLSMLMMLVKGAFYI 252 +S +L++G++ + L PLS +L++G+F + L PLS +L++G+F + Sbjct: 1 MSPFNLLIRGSYAVGALASNCIPLSPFNLLIRGSFAVGALATNCIPLSPFNLLIRGSFAV 60
Query: 251 RDLFVGY 231 L Y Sbjct: 61 GALATNY 67
>tr|Q5MCZ2|Q5MCZ2_SHEEP High-sulphur keratin intermediate-filament-associated protein (Fragment) OS=Ovis aries GN=KAP1.1 PE=4 SV=1 Length = 103
Score = 34.3 bits (77), Expect = 4.4 Identities = 22/76 (28%), Positives = 30/76 (39%) Frame = -1
Query: 486 GGQGAPRSVLMSNCCQPTTIDAYDVGQRCILYS*LICCQPTTIDAYDVGQRCILYS*LIC 307 G ++ ++CCQPT+I CCQPT+I I S C Sbjct: 21 GSSPCQQTCCQTSCCQPTSIQT-------------SCCQPTSIQTSCCQPISIQTS---C 64
Query: 306 CQPTTIDAYDVGQRCI 259 CQPT+I C+ Sbjct: 65 CQPTSIQTSCCQPTCL 80
>tr|Q29619|Q29619_SHEEP High-sulphur wool matrix protein B2A OS=Ovis aries PE=4 SV=1 Length = 182
Score = 34.3 bits (77), Expect = 4.4 Identities = 22/76 (28%), Positives = 30/76 (39%) Frame = -1
Query: 486 GGQGAPRSVLMSNCCQPTTIDAYDVGQRCILYS*LICCQPTTIDAYDVGQRCILYS*LIC 307 G ++ ++CCQPT+I CCQPT+I I S C Sbjct: 21 GSSPCQQTCCQTSCCQPTSIQT-------------SCCQPTSIQTSCCQPISIQTS---C 64
Query: 306 CQPTTIDAYDVGQRCI 259 CQPT+I C+ Sbjct: 65 CQPTSIQTSCCQPTCL 80
>tr|B4X1V5|B4X1V5_9GAMM Putative uncharacterized protein OS=Alcanivorax sp. DG881 GN=ADG881_522 PE=4 SV=1 Length = 196
Score = 33.9 bits (76), Expect = 5.6 Identities = 22/72 (30%), Positives = 38/72 (52%) Frame = -2
Query: 446 VANQPLSMLMMLVKGAFYIRDLFVANQPLSMLMMLVKGAFYIRDLFVANQPLSMLMMLVK 267 + N P + + L G+ + N P+S L+MLV G + ++ V LSM+++LV Sbjct: 110 LVNLPFQLYLYLGDGSSMMNRFGTPNPPVSTLVMLVGGLCWFINVLVL---LSMMLLLVL 166
Query: 266 GAFYIRDLFVGY 231 G +++ DL Y Sbjct: 167 G-WFLPDLLAPY 177
>tr|A8P0H8|A8P0H8_COPC7 Putative uncharacterized protein OS=Coprinopsis cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_10314 PE=4 SV=1 Length = 634
Score = 33.9 bits (76), Expect = 5.6 Identities = 16/43 (37%), Positives = 26/43 (60%) Frame = +3
Query: 411 QHHKHR*WLVGNNCSSTPTVVPLVHP*SFTSHNLMTIALSSLN 539 Q+H+HR + ++ S TP V HP + TS +T+ +S+LN Sbjct: 410 QYHRHRFLRMTSDTSDTPRTVTFPHPPNSTSLATVTVPISTLN 452
>tr|A7T388|A7T388_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g221714 PE=4 SV=1 Length = 254
Score = 33.1 bits (74), Expect = 9.7 Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 14/77 (18%) Frame = -1
Query: 447 CCQPTTIDAYDVGQ-------RCILYS*LICCQPTTIDAYDVG-------QRCILYS*LI 310 CC+ T D +VGQ R + CC+ T D +VG R + Sbjct: 92 CCRSTGADGEEVGQQMVTGDDRAFTCGPVTCCRSTGADGEEVGPQMVTGDDRGFTCGPVT 151
Query: 309 CCQPTTIDAYDVGQRCI 259 CC+ T D +VG++ + Sbjct: 152 CCRSTGADGEEVGRQMV 168
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