BP915493 |
Clone id |
YMU001_000072_C07 |
Library |
YMU01 |
Length |
618 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000072_C07. |
Accession |
BP915493 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL723Contig1 |
Sequence |
CACCGCTGCCCACCCTAATTAGCTGCCATTTTCTCTAACAATGGGCCAGTAATCTCTCTG TCAGGCCGTCAATTGCTTGTAAATTATGTACACTTCTTCATAATCCTGGCTTCGATCCTC ATTTAATTAGTATGGCCTGCCTTTGCGCCCCCACTACCCATGAGGGCTCCTTCCGTTGCC GTTTACACAGAGTGCCTCCCCTTCTCACTAACTCCGCTCAATTAGCCTCTCTCCCTCCTC AGAAAGGGGCTTTTGCCGGCAGCCTGCCACCACCGCCGACTATCTCAGATCATCCATGTC GTATCCGCGCCCGCGAAGCACTGTCGCCCGCCGCTGCACGTCCGGTCCATTGTAATTTTC CCTCATCCTCACCATCACCAGCACTTGCTGTATCACATCCGGTCCATTGTAATTTGGCCT CATCATCATCATCATCAACAGCAGTTGCTGCATCGCCTCCGTCGACATCCCCATCTCACT GTGCGCCCCGACCGTCTCCGGCAAAGCGAGCCATATTGTCATCCACATCGCTATCTAGAT CCCTGTATCCTGGATCATCCAAGTCGGAGCTGTCCTCAGCTACGCGGTGTACCACGGGTC CAAGTGCAAGTCACGCAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q17RH7 |
Definition |
sp|Q17RH7|TPRXL_HUMAN Putative protein TPRXL OS=Homo sapiens |
Align length |
41 |
Score (bit) |
33.5 |
E-value |
0.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6H886 |
Definition |
tr|Q6H886|Q6H886_ORYSJ Putative uncharacterized protein OJ1572_F02.6 (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica |
Align length |
41 |
Score (bit) |
52.0 |
E-value |
3.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP915493|Adiantum capillus-veneris mRNA, clone: YMU001_000072_C07. (618 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6H886|Q6H886_ORYSJ Putative uncharacterized protein OJ1572_F... 52 3e-05 tr|A2X1P3|A2X1P3_ORYSI Putative uncharacterized protein OS=Oryza... 52 3e-05 tr|A5AWM3|A5AWM3_VITVI Putative uncharacterized protein OS=Vitis... 47 7e-04 tr|A9NY76|A9NY76_PICSI Putative uncharacterized protein OS=Picea... 47 9e-04 tr|A7QXY0|A7QXY0_VITVI Chromosome undetermined scaffold_235, who... 47 9e-04 tr|Q69V63|Q69V63_ORYSJ Os06g0608000 protein OS=Oryza sativa subs... 47 0.001 tr|A9TIC0|A9TIC0_PHYPA Predicted protein OS=Physcomitrella paten... 47 0.001 tr|A9P9J5|A9P9J5_POPTR Putative uncharacterized protein OS=Popul... 47 0.001 tr|A3BDF7|A3BDF7_ORYSJ Putative uncharacterized protein OS=Oryza... 47 0.001 tr|A2YEW1|A2YEW1_ORYSI Putative uncharacterized protein OS=Oryza... 47 0.001 tr|Q5ZF84|Q5ZF84_PLAMJ Putative uncharacterized protein OS=Plant... 46 0.002 tr|Q9ZTM9|Q9ZTM9_PETHY PGPS/D10 OS=Petunia hybrida GN=PGPS/D10 P... 45 0.003 tr|Q9C9V7|Q9C9V7_ARATH Putative uncharacterized protein T23K23.2... 45 0.003 tr|A9NRP8|A9NRP8_PICSI Putative uncharacterized protein OS=Picea... 45 0.003 tr|Q56YG8|Q56YG8_ARATH Putative uncharacterized protein OS=Arabi... 45 0.003 tr|A0MDW2|A0MDW2_ARATH Putative uncharacterized protein (Fragmen... 45 0.003 tr|A9RHQ5|A9RHQ5_PHYPA Predicted protein OS=Physcomitrella paten... 45 0.004 tr|Q7X6Y3|Q7X6Y3_ORYSA OSJNBa0014K14.12 protein OS=Oryza sativa ... 44 0.006 tr|Q7F8Y8|Q7F8Y8_ORYSJ OSJNBb0116K07.4 protein OS=Oryza sativa s... 44 0.006 tr|A9NW60|A9NW60_PICSI Putative uncharacterized protein OS=Picea... 44 0.006 tr|A3AVC8|A3AVC8_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.006 tr|A2XVA5|A2XVA5_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.006 tr|Q69QY6|Q69QY6_ORYSJ Os02g0799600 protein OS=Oryza sativa subs... 44 0.008 tr|B8AED7|B8AED7_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.008 tr|Q9FY56|Q9FY56_ARATH Putative uncharacterized protein T5K6_80 ... 44 0.010 tr|B8LP28|B8LP28_PICSI Putative uncharacterized protein OS=Picea... 44 0.010 tr|A9NKK5|A9NKK5_PICSI Putative uncharacterized protein OS=Picea... 44 0.010 tr|Q9LXZ0|Q9LXZ0_ARATH Putative uncharacterized protein T5P19_15... 43 0.013 tr|Q9FKU6|Q9FKU6_ARATH Genomic DNA, chromosome 5, P1 clone:MDA7 ... 43 0.013 tr|A9U197|A9U197_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.013
>tr|Q6H886|Q6H886_ORYSJ Putative uncharacterized protein OJ1572_F02.6 (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=OJ1572_F02.6 PE=4 SV=1 Length = 115
Score = 52.0 bits (123), Expect = 3e-05 Identities = 24/41 (58%), Positives = 28/41 (68%) Frame = +3
Query: 117 PHLISMACLCAPTTHEGSFRCRLHRVPPLLTNSAQLASLPP 239 P ++ CLCAPTTH GSFRCRLHR P T A+ A +PP Sbjct: 24 PAAVAKYCLCAPTTHPGSFRCRLHR-SPAATAKAKAAIVPP 63
>tr|A2X1P3|A2X1P3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06122 PE=4 SV=1 Length = 114
Score = 52.0 bits (123), Expect = 3e-05 Identities = 24/41 (58%), Positives = 28/41 (68%) Frame = +3
Query: 117 PHLISMACLCAPTTHEGSFRCRLHRVPPLLTNSAQLASLPP 239 P ++ CLCAPTTH GSFRCRLHR P T A+ A +PP Sbjct: 24 PAAVAKYCLCAPTTHPGSFRCRLHR-SPAATAKAKAAIVPP 63
>tr|A5AWM3|A5AWM3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_006791 PE=4 SV=1 Length = 526
Score = 47.4 bits (111), Expect = 7e-04 Identities = 22/43 (51%), Positives = 27/43 (62%), Gaps = 5/43 (11%) Frame = +3
Query: 138 CLCAPTTHEGSFRCRLHRVPPL-----LTNSAQLASLPPQKGA 251 CLC+PTTH GSFRCRLHR P L + +++Q S P A Sbjct: 470 CLCSPTTHAGSFRCRLHRAPSLQRTKSIDSASQRESFPKVNSA 512
>tr|A9NY76|A9NY76_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 Length = 99
Score = 47.0 bits (110), Expect = 9e-04 Identities = 18/20 (90%), Positives = 19/20 (95%) Frame = +3
Query: 138 CLCAPTTHEGSFRCRLHRVP 197 CLC+PTTHEGSFRCRLHR P Sbjct: 48 CLCSPTTHEGSFRCRLHRSP 67
>tr|A7QXY0|A7QXY0_VITVI Chromosome undetermined scaffold_235, whole genome shotgun sequence (Fragment) OS=Vitis vinifera GN=GSVIVT00009455001 PE=4 SV=1 Length = 76
Score = 47.0 bits (110), Expect = 9e-04 Identities = 21/38 (55%), Positives = 26/38 (68%), Gaps = 5/38 (13%) Frame = +3
Query: 138 CLCAPTTHEGSFRCRLHRVPPL-----LTNSAQLASLP 236 CLC+PTTH GSFRCRLHR P L + +++Q S P Sbjct: 38 CLCSPTTHAGSFRCRLHRAPSLQRTKSMDSASQRESFP 75
>tr|Q69V63|Q69V63_ORYSJ Os06g0608000 protein OS=Oryza sativa subsp. japonica GN=P0556B08.11-1 PE=4 SV=1 Length = 123
Score = 46.6 bits (109), Expect = 0.001 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = +3
Query: 117 PHLISMACLCAPTTHEGSFRCRLHR 191 P + S +CLC+PTTH GSFRCRLHR Sbjct: 70 PRVASPSCLCSPTTHAGSFRCRLHR 94
>tr|A9TIC0|A9TIC0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_93133 PE=4 SV=1 Length = 429
Score = 46.6 bits (109), Expect = 0.001 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = +3
Query: 129 SMACLCAPTTHEGSFRCRLHR 191 +M+CLCAPTTH GSFRCRLHR Sbjct: 123 TMSCLCAPTTHAGSFRCRLHR 143
>tr|A9P9J5|A9P9J5_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=4 SV=1 Length = 99
Score = 46.6 bits (109), Expect = 0.001 Identities = 22/33 (66%), Positives = 24/33 (72%), Gaps = 1/33 (3%) Frame = +3
Query: 138 CLCAPTTHEGSFRCRLHRVPPL-LTNSAQLASL 233 CLC+PT+H GSFRCRLHR P L T S ASL Sbjct: 44 CLCSPTSHAGSFRCRLHRAPSLQRTKSIDSASL 76
>tr|A3BDF7|A3BDF7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021079 PE=4 SV=1 Length = 139
Score = 46.6 bits (109), Expect = 0.001 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = +3
Query: 117 PHLISMACLCAPTTHEGSFRCRLHR 191 P + S +CLC+PTTH GSFRCRLHR Sbjct: 70 PRVASPSCLCSPTTHAGSFRCRLHR 94
>tr|A2YEW1|A2YEW1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23656 PE=4 SV=1 Length = 138
Score = 46.6 bits (109), Expect = 0.001 Identities = 18/25 (72%), Positives = 21/25 (84%) Frame = +3
Query: 117 PHLISMACLCAPTTHEGSFRCRLHR 191 P + S +CLC+PTTH GSFRCRLHR Sbjct: 70 PRVASPSCLCSPTTHAGSFRCRLHR 94
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