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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP915500
Clone id YMU001_000072_D04
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000072_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTCAGAGAGGGATGTCATAAGCTCTCCATCCTAGCCAGCCAAATCAATCTGAGTTTGCTC
CACTAATTGGTGCCTCTGAGAGTCCTGAACAGAATCAATGGCTGATGCTCAAACTATTCT
AAGGTCAAGGGCATCTATCTAACAAGGCTTCACTTCATCTACACCTAGATTCGCCACAAA
CGACGAATACGGGGTGAACAATGAGAAAAACACCAGGGAGCATCTGTGGATAAACTATAT
CCACCAGAAATGACAAATAAGGGGTGAACAACAAGAAAAACACAAGGGAGCATCTGTGGA
GATATAGCAGACAAGTATGGCACCAACTACCTGCATCCAGCGCACCATATCTGGGGATCA
TGTGGAACACATTACAATGCAGAAAGACTTTCCAAGGCTCATTGCCCCGGAACAAACCAA
GAACAATGAGCTTAGAAAGTAAGGCACAACTCTGCATCTCTGGATCAATAATCCCCAAGC
CACCCTCAGCCTGCGGC
■■Homology search results ■■ -
sp_hit_id Q32LI2
Definition sp|Q32LI2|TRYX3_BOVIN Probable inactive trypsin-X3 OS=Bos taurus
Align length 25
Score (bit) 31.2
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915500|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_D04.
         (497 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q32LI2|TRYX3_BOVIN Probable inactive trypsin-X3 OS=Bos taurus...    31   2.8  
sp|Q89AI1|MVIN_BUCBP Virulence factor mviN homolog OS=Buchnera a...    31   3.6  
sp|Q8BW11|TRYX3_MOUSE Putative trypsin-X3 OS=Mus musculus GN=Try...    30   4.7  
sp|Q8IYP2|TRYX3_HUMAN Trypsin-X3 OS=Homo sapiens GN=TRYX3 PE=2 SV=1    30   4.7  
sp|Q6IE06|TRYX3_RAT Putative trypsin-X3 OS=Rattus norvegicus GN=...    30   6.1  

>sp|Q32LI2|TRYX3_BOVIN Probable inactive trypsin-X3 OS=Bos taurus
           GN=TRYX3 PE=2 SV=1
          Length = 242

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -1

Query: 320 PYLSAISPQMLPCVFLVVHPLFVIS 246
           PYL  +    LPCV +++HPL+VI+
Sbjct: 29  PYLIYLKSDYLPCVGVLIHPLWVIT 53


>sp|Q89AI1|MVIN_BUCBP Virulence factor mviN homolog OS=Buchnera
           aphidicola subsp. Baizongia pistaciae GN=mviN PE=3 SV=1
          Length = 513

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -2

Query: 343 ALDAGSWCHTCLLYLHRCSLVFFLLFTPYLSFLVDIVYPQMLPGVFLIVH 194
           A+   SW +  LLY   C   FF+  T +L FL+ I    M+  + L ++
Sbjct: 413 AISLASWINFFLLYRKLCQSEFFIPSTNWLRFLLKIFAAAMVMLILLFIN 462


>sp|Q8BW11|TRYX3_MOUSE Putative trypsin-X3 OS=Mus musculus GN=Tryx3
           PE=2 SV=1
          Length = 241

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 320 PYLSAISPQMLPCVFLVVHPLFVISGGY 237
           PYL  +    LPC  +++HPL+VI+  +
Sbjct: 29  PYLVYLKSDYLPCTGVLIHPLWVITAAH 56


>sp|Q8IYP2|TRYX3_HUMAN Trypsin-X3 OS=Homo sapiens GN=TRYX3 PE=2 SV=1
          Length = 241

 Score = 30.4 bits (67), Expect = 4.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 320 PYLSAISPQMLPCVFLVVHPLFVISGGY 237
           PYL  +    LPC  +++HPL+VI+  +
Sbjct: 29  PYLVYLKSDYLPCAGVLIHPLWVITAAH 56


>sp|Q6IE06|TRYX3_RAT Putative trypsin-X3 OS=Rattus norvegicus
           GN=Tryx3 PE=2 SV=1
          Length = 240

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -1

Query: 320 PYLSAISPQMLPCVFLVVHPLFVISGGY 237
           PYL  +    LPC  +++HPL+V++  +
Sbjct: 28  PYLVYLKSDYLPCTGVLIHPLWVVTSAH 55
tr_hit_id A9RCP1
Definition tr|A9RCP1|A9RCP1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 41
Score (bit) 46.6
E-value 0.0007
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP915500|Adiantum capillus-veneris mRNA, clone:
YMU001_000072_D04.
         (497 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RCP1|A9RCP1_PHYPA Predicted protein OS=Physcomitrella paten...    47   7e-04
tr|A9TJ48|A9TJ48_PHYPA Predicted protein OS=Physcomitrella paten...    40   0.061
tr|A9SSE4|A9SSE4_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.10 
tr|A2EYR6|A2EYR6_TRIVA Adenylate and Guanylate cyclase catalytic...    35   2.6  
tr|Q7XW91|Q7XW91_ORYSJ OSJNBb0043H09.5 protein OS=Oryza sativa s...    34   4.4  
tr|B6HH07|B6HH07_PENCH Pc20g13700 protein OS=Penicillium chrysog...    34   4.4  
tr|A0QQD5|A0QQD5_MYCS2 Major facilitator superfamily protein OS=...    27   5.5  
tr|Q7F8T0|Q7F8T0_ORYSJ Os02g0192100 protein OS=Oryza sativa subs...    33   5.7  
tr|Q2QVM7|Q2QVM7_ORYSJ Exostosin family protein, expressed OS=Or...    33   5.7  
tr|B8AJA0|B8AJA0_ORYSI Putative uncharacterized protein OS=Oryza...    33   5.7  
tr|A9TB40|A9TB40_PHYPA Predicted protein OS=Physcomitrella paten...    33   5.7  
tr|A3CFZ8|A3CFZ8_ORYSJ Putative uncharacterized protein OS=Oryza...    33   5.7  
tr|A3A416|A3A416_ORYSJ Putative uncharacterized protein OS=Oryza...    33   5.7  
tr|A9SAX7|A9SAX7_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.5  
tr|Q84T47|Q84T47_ORYSJ Putative reverse transcriptase (Retrotran...    33   9.8  
tr|B6SKQ4|B6SKQ4_MAIZE MYB2 OS=Zea mays PE=2 SV=1                      33   9.8  

>tr|A9RCP1|A9RCP1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64171 PE=4 SV=1
          Length = 985

 Score = 46.6 bits (109), Expect = 7e-04
 Identities = 21/41 (51%), Positives = 30/41 (73%)
 Frame = -2

Query: 490 AEGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFLHCNV 368
           A GG+ I+DP++Q+ AL++KL+V  L  G EPWKVF   N+
Sbjct: 800 ASGGVKILDPKLQTQALMTKLVVQSLQPGYEPWKVFARHNL 840


>tr|A9TJ48|A9TJ48_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_93427 PE=4 SV=1
          Length = 170

 Score = 40.0 bits (92), Expect = 0.061
 Identities = 19/36 (52%), Positives = 25/36 (69%)
 Frame = -2

Query: 487 EGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFL 380
           +GGL II P  ++ ALL+KLI  GL  G EPWK+ +
Sbjct: 30  QGGLKIIGPATKARALLAKLIARGLTPGLEPWKIMV 65


>tr|A9SSE4|A9SSE4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_230851 PE=4 SV=1
          Length = 209

 Score = 39.3 bits (90), Expect = 0.10
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = -2

Query: 496 PQAEGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFLHCNVFHMIPRYGALDAGS 326
           P   GG+ ++DPE Q  AL++KL+V  L  G  PWK  +   +  ++   G +   S
Sbjct: 48  PHKLGGIKLLDPETQIHALMAKLLVRSLLPGFVPWKTLMQHRLRGLVGDLGGVGKSS 104


>tr|A2EYR6|A2EYR6_TRIVA Adenylate and Guanylate cyclase catalytic
           domain containing protein OS=Trichomonas vaginalis G3
           GN=TVAG_451130 PE=4 SV=1
          Length = 1590

 Score = 34.7 bits (78), Expect = 2.6
 Identities = 21/99 (21%), Positives = 46/99 (46%)
 Frame = -3

Query: 456 CRVVPYFLSSLFLVCSGAMSLGKSFCIVMCST*SPDMVRWMQVVGAILVCYISTDAPLCF 277
           C ++P+ ++ L++V    M +   FC ++CS     +  +   +   +       A L F
Sbjct: 262 CYLIPHLMNLLYVVHLSNMIIFAIFCSIICSNFMMFVAYFFPTMKHSICFIFLLAAYLFF 321

Query: 276 SCCSPLICHFWWI*FIHRCSLVFFSLFTPYSSFVANLGV 160
           S  SP++ HF+   +I + S+   S+ +    +  +L +
Sbjct: 322 SGISPIVLHFYRKYYIKKLSVTDESIISDRKEYFDSLKI 360


>tr|Q7XW91|Q7XW91_ORYSJ OSJNBb0043H09.5 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBb0043H09.5 PE=4 SV=1
          Length = 858

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
 Frame = -2

Query: 496 PQAEGGLGIIDPEMQSCALLSKLIVLGLFRGNEPWKVFLHCNVFHM---IPRYGALDAGS 326
           P+  GGLGII+ E Q+CALL K +     +   PW V L  N ++     PR+   + GS
Sbjct: 721 PKHRGGLGIINLEFQNCALLMKHLDKFYNKRGLPW-VRLLWNAYYKNNPHPRHAMQEKGS 779

Query: 325 W 323
           +
Sbjct: 780 F 780


>tr|B6HH07|B6HH07_PENCH Pc20g13700 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc20g13700 PE=4 SV=1
          Length = 353

 Score = 33.9 bits (76), Expect = 4.4
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
 Frame = +3

Query: 318 WHQLPASSAPYLG---IMWNTLQCRKTFQGSLPRNKPRTMSLESKAQLCISGSIIPKPPS 488
           W  +P SS P++G   +   +L+ R+TFQ S PR K   M   +K   C   S+ P  P+
Sbjct: 226 WVVVPESSDPFVGSSELASPSLRTRRTFQASSPRRKSAVMPRLAKRVSC--SSVRPHSPT 283


>tr|A0QQD5|A0QQD5_MYCS2 Major facilitator superfamily protein
           OS=Mycobacterium smegmatis (strain ATCC 700084 /
           mc(2)155) GN=MSMEG_0716 PE=4 SV=1
          Length = 432

 Score = 26.6 bits (57), Expect(2) = 5.5
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = -3

Query: 483 VAWGLLIQRCRVVPYFLSSLFLVCSGAMSLG 391
           +A G+L Q   +VP++L ++F++  G   LG
Sbjct: 246 LAVGILTQAASLVPFYLVTVFVLSHGPEELG 276



 Score = 25.8 bits (55), Expect(2) = 5.5
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
 Frame = -1

Query: 323 VPYLSAISPQMLPCVFLVVHPLFVISGGYS----LSTDAPW 213
           VPY+S ++ +M P   L++  L++ + GY     LST   W
Sbjct: 297 VPYVSIVADRMGPRKMLILGSLYMAAIGYPFFWLLSTGEGW 337


>tr|Q7F8T0|Q7F8T0_ORYSJ Os02g0192100 protein OS=Oryza sativa subsp.
           japonica GN=P0437H03.102 PE=2 SV=1
          Length = 252

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = +1

Query: 214 QGASVDKLYPPEMTNKG*TTRKTQGSICGDIADKYGTNYLHPAHHIWGSCGTHYNAERLS 393
           +GA  D    P +  +      T  +  G  AD YG+N   P  + WG   + Y + ++ 
Sbjct: 102 KGAGYDPSKAPALGGQA-----TAAAAHGSSADYYGSNQATPPSYAWGQAASAYGSAQVP 156

Query: 394 KAHCPG 411
           ++H  G
Sbjct: 157 QSHASG 162


>tr|Q2QVM7|Q2QVM7_ORYSJ Exostosin family protein, expressed OS=Oryza
           sativa subsp. japonica GN=LOC_Os12g12290 PE=4 SV=1
          Length = 527

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = -2

Query: 349 YGALDAGSWCHTCLLYLHRCSLVFFLLFTPYLSFLVD--IVYPQMLPGVFLIVHP 191
           YG L  GSW  +CLL+      VF L   PY S+L+   +V P  L   FL   P
Sbjct: 11  YGLLIVGSWLLSCLLHFQ----VFHLSLFPYPSYLLSRRVVLPLALNARFLPPRP 61


>tr|B8AJA0|B8AJA0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06196 PE=4 SV=1
          Length = 485

 Score = 33.5 bits (75), Expect = 5.7
 Identities = 17/66 (25%), Positives = 29/66 (43%)
 Frame = +1

Query: 214 QGASVDKLYPPEMTNKG*TTRKTQGSICGDIADKYGTNYLHPAHHIWGSCGTHYNAERLS 393
           +GA  D    P +  +      T  +  G  AD YG+N   P  + WG   + Y + ++ 
Sbjct: 335 KGAGYDPSKAPALGGQA-----TAAAAHGSSADYYGSNQATPPSYAWGQAASAYGSAQVP 389

Query: 394 KAHCPG 411
           ++H  G
Sbjct: 390 QSHASG 395